RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 RPAP2Q8IXW5 612 aaPredicted RBP28.57■■■□□ 2.16
YIF1A-213ENST00000534374 CHMP4BQ9H444 224 aaKnown RBP28.57■■■□□ 2.16
YIF1A-213ENST00000534374 CETPP11597 493 aa28.56■■■□□ 2.16
YIF1A-213ENST00000534374 CRHR2Q13324 411 aa28.56■■■□□ 2.16
YIF1A-213ENST00000534374 RFX7Q2KHR2 1363 aa28.56■■■□□ 2.16
YIF1A-213ENST00000534374 HSP90AB4PQ58FF6 505 aa28.56■■■□□ 2.16
YIF1A-213ENST00000534374 EAF2Q96CJ1 260 aaPredicted RBP28.56■■■□□ 2.16
YIF1A-213ENST00000534374 IRF6O14896 467 aa28.55■■■□□ 2.16
YIF1A-213ENST00000534374 SNAPC2Q13487 334 aa28.55■■■□□ 2.16
YIF1A-213ENST00000534374 NOL9Q5SY16 702 aaKnown RBP28.55■■■□□ 2.16
YIF1A-213ENST00000534374 ZBTB40Q9NUA8 1239 aa28.55■■■□□ 2.16
YIF1A-213ENST00000534374 DBNLQ9UJU6 430 aaKnown RBP28.55■■■□□ 2.16
YIF1A-213ENST00000534374 SH3BP5LQ7L8J4 393 aa28.54■■■□□ 2.16
YIF1A-213ENST00000534374 ZSCAN29Q8IWY8 852 aaPredicted RBP28.54■■■□□ 2.16
YIF1A-213ENST00000534374 ZCCHC17Q9NP64 241 aaKnown RBP28.54■■■□□ 2.16
YIF1A-213ENST00000534374 SNRKQ9NRH2 765 aa28.54■■■□□ 2.16
YIF1A-213ENST00000534374 COG6Q9Y2V7 657 aa28.54■■■□□ 2.16
YIF1A-213ENST00000534374 CCDC8Q9H0W5 538 aaPredicted RBP28.53■■■□□ 2.16
YIF1A-213ENST00000534374 DDX4Q9NQI0 724 aaKnown RBP28.53■■■□□ 2.16
YIF1A-213ENST00000534374 ATRNL1Q5VV63 1379 aa28.52■■■□□ 2.16
YIF1A-213ENST00000534374 PHF20L1A8MW92 1017 aa28.52■■■□□ 2.16
YIF1A-213ENST00000534374 CYP2E1P05181 493 aaPredicted RBP28.52■■■□□ 2.16
YIF1A-213ENST00000534374 ZFYVE28Q9HCC9 887 aa28.52■■■□□ 2.16
YIF1A-213ENST00000534374 EXOC6BQ9Y2D4 811 aa28.52■■■□□ 2.16
YIF1A-213ENST00000534374 DDTLA6NHG4 134 aaPredicted RBP28.51■■■□□ 2.15
YIF1A-213ENST00000534374 PICALMQ13492 652 aa28.51■■■□□ 2.15
YIF1A-213ENST00000534374 FBXO46Q6PJ61 603 aaPredicted RBP28.51■■■□□ 2.15
YIF1A-213ENST00000534374 FAM43AQ8N2R8 423 aa28.51■■■□□ 2.15
YIF1A-213ENST00000534374 ERO1AQ96HE7 468 aa28.51■■■□□ 2.15
YIF1A-213ENST00000534374 TBC1D12O60347 775 aa28.5■■■□□ 2.15
YIF1A-213ENST00000534374 HMMRO75330 724 aa28.5■■■□□ 2.15
YIF1A-213ENST00000534374 SP3Q02447 781 aa28.5■■■□□ 2.15
YIF1A-213ENST00000534374 PDE3AQ14432 1141 aa28.5■■■□□ 2.15
YIF1A-213ENST00000534374 TAF1CQ15572 869 aaPredicted RBP28.5■■■□□ 2.15
YIF1A-213ENST00000534374 NAA16Q6N069 864 aaPredicted RBP28.5■■■□□ 2.15
YIF1A-213ENST00000534374 HPS5Q9UPZ3 1129 aa28.5■■■□□ 2.15
YIF1A-213ENST00000534374 KCNH4Q9UQ05 1017 aa28.5■■■□□ 2.15
YIF1A-213ENST00000534374 BAG3O95817 575 aa28.49■■■□□ 2.15
YIF1A-213ENST00000534374 ZAP70P43403 619 aa28.49■■■□□ 2.15
YIF1A-213ENST00000534374 PPP4CP60510 307 aa28.49■■■□□ 2.15
YIF1A-213ENST00000534374 NOL10Q9BSC4 688 aaKnown RBP28.49■■■□□ 2.15
YIF1A-213ENST00000534374 TLR7Q9NYK1 1049 aaKnown RBP28.49■■■□□ 2.15
YIF1A-213ENST00000534374 BTBD19C9JJ37 291 aa28.48■■■□□ 2.15
YIF1A-213ENST00000534374 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.48■■■□□ 2.15
YIF1A-213ENST00000534374 RHPN1Q8TCX5 695 aa28.48■■■□□ 2.15
YIF1A-213ENST00000534374 CXCL11O14625 94 aa28.47■■■□□ 2.15
YIF1A-213ENST00000534374 PLCG2P16885 1265 aa28.47■■■□□ 2.15
YIF1A-213ENST00000534374 SIRT2Q8IXJ6 389 aa28.47■■■□□ 2.15
YIF1A-213ENST00000534374 SCYL3Q8IZE3 742 aa28.47■■■□□ 2.15
YIF1A-213ENST00000534374 CTNND1O60716 968 aaKnown RBP28.46■■■□□ 2.15
YIF1A-213ENST00000534374 OTOP1Q7RTM1 612 aa28.46■■■□□ 2.15
YIF1A-213ENST00000534374 AACSQ86V21 672 aa28.46■■■□□ 2.15
YIF1A-213ENST00000534374 TEX11Q8IYF3 940 aa28.46■■■□□ 2.15
YIF1A-213ENST00000534374 TRIM17Q9Y577 477 aa28.46■■■□□ 2.15
YIF1A-213ENST00000534374 KIF1BPQ96EK5 621 aa28.45■■■□□ 2.14
YIF1A-213ENST00000534374 OSBPL5Q9H0X9 879 aaPredicted RBP28.45■■■□□ 2.14
YIF1A-213ENST00000534374 PICK1Q9NRD5 415 aa28.45■■■□□ 2.14
YIF1A-213ENST00000534374 TLR2O60603 784 aa28.44■■■□□ 2.14
YIF1A-213ENST00000534374 ARHGEF6Q15052 776 aa28.44■■■□□ 2.14
YIF1A-213ENST00000534374 TMED8Q6PL24 325 aaPredicted RBP28.44■■■□□ 2.14
YIF1A-213ENST00000534374 ANKRD23Q86SG2 305 aa28.44■■■□□ 2.14
YIF1A-213ENST00000534374 CLASRPQ8N2M8 674 aaKnown RBP28.44■■■□□ 2.14
YIF1A-213ENST00000534374 SH3RF3Q8TEJ3 882 aaPredicted RBP28.44■■■□□ 2.14
YIF1A-213ENST00000534374 PIH1D3Q9NQM4 214 aaKnown RBP28.44■■■□□ 2.14
YIF1A-213ENST00000534374 COL2A1P02458 1487 aaPredicted RBP28.44■■■□□ 2.14
YIF1A-213ENST00000534374 DOCK2Q92608 1830 aa28.43■■■□□ 2.14
YIF1A-213ENST00000534374 RAB11FIP3O75154 756 aa28.43■■■□□ 2.14
YIF1A-213ENST00000534374 PTPRAP18433 802 aa28.43■■■□□ 2.14
YIF1A-213ENST00000534374 CD99L2Q8TCZ2 262 aa28.43■■■□□ 2.14
YIF1A-213ENST00000534374 AATFQ9NY61 560 aaKnown RBP eCLIP28.43■■■□□ 2.14
YIF1A-213ENST00000534374 ZHX2Q9Y6X8 837 aa28.43■■■□□ 2.14
YIF1A-213ENST00000534374 DHX36Q9H2U1 1008 aaKnown RBP28.42■■■□□ 2.14
YIF1A-213ENST00000534374 EFCC1Q9HA90 598 aa28.42■■■□□ 2.14
YIF1A-213ENST00000534374 IL1RAPL2Q9NP60 686 aa28.42■■■□□ 2.14
YIF1A-213ENST00000534374 MOGSQ13724 837 aa28.41■■■□□ 2.14
YIF1A-213ENST00000534374 ADGRA1Q86SQ6 560 aa28.41■■■□□ 2.14
YIF1A-213ENST00000534374 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.41■■■□□ 2.14
YIF1A-213ENST00000534374 AFG3L2Q9Y4W6 797 aa28.41■■■□□ 2.14
YIF1A-213ENST00000534374 SOX10P56693 466 aa28.4■■■□□ 2.14
YIF1A-213ENST00000534374 C20orf194Q5TEA3 1177 aa28.4■■■□□ 2.14
YIF1A-213ENST00000534374 PI4KBQ9UBF8 816 aa28.4■■■□□ 2.14
YIF1A-213ENST00000534374 PTPN22Q9Y2R2 807 aa28.4■■■□□ 2.14
YIF1A-213ENST00000534374 IDH1O75874 414 aaKnown RBP28.39■■■□□ 2.14
YIF1A-213ENST00000534374 SLURP2P0DP57 97 aa28.39■■■□□ 2.14
YIF1A-213ENST00000534374 CYP7A1P22680 504 aa28.39■■■□□ 2.14
YIF1A-213ENST00000534374 FASTKD5Q7L8L6 764 aaKnown RBP28.39■■■□□ 2.14
YIF1A-213ENST00000534374 CERS3Q8IU89 383 aa28.39■■■□□ 2.14
YIF1A-213ENST00000534374 HERC5Q9UII4 1024 aaKnown RBP28.39■■■□□ 2.14
YIF1A-213ENST00000534374 MYO5AQ9Y4I1 1855 aaKnown RBP28.39■■■□□ 2.14
YIF1A-213ENST00000534374 PDHXO00330 501 aa28.38■■■□□ 2.13
YIF1A-213ENST00000534374 MAP3K12Q12852 859 aa28.38■■■□□ 2.13
YIF1A-213ENST00000534374 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.38■■■□□ 2.13
YIF1A-213ENST00000534374 TGFBRAP1Q8WUH2 860 aa28.38■■■□□ 2.13
YIF1A-213ENST00000534374 A0A0G2JLL6 359 aaPredicted RBP28.37■■■□□ 2.13
YIF1A-213ENST00000534374 C17orf99Q6UX52 265 aa28.37■■■□□ 2.13
YIF1A-213ENST00000534374 PRRT2Q7Z6L0 340 aaPredicted RBP28.37■■■□□ 2.13
YIF1A-213ENST00000534374 FOXP4Q8IVH2 680 aaPredicted RBP28.37■■■□□ 2.13
YIF1A-213ENST00000534374 ANTXR1Q9H6X2 564 aa28.37■■■□□ 2.13
YIF1A-213ENST00000534374 IFIT2P09913 472 aaKnown RBP28.36■■■□□ 2.13
YIF1A-213ENST00000534374 CAP1Q01518 475 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms