RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 TICAM2Q86XR7 235 aa11.24□□□□□ -0.61
RTL1-201ENST00000534062 SH3RF3Q8TEJ3 882 aaPredicted RBP11.24□□□□□ -0.61
RTL1-201ENST00000534062 GPHNQ9NQX3 736 aaPredicted RBP11.24□□□□□ -0.61
RTL1-201ENST00000534062 IL1R1P14778 569 aa11.23□□□□□ -0.61
RTL1-201ENST00000534062 CC2D2BQ6DHV5 1058 aa11.23□□□□□ -0.61
RTL1-201ENST00000534062 ZSCAN29Q8IWY8 852 aaPredicted RBP11.23□□□□□ -0.61
RTL1-201ENST00000534062 CCDC144CPQ8IYA2 1237 aa11.23□□□□□ -0.61
RTL1-201ENST00000534062 RTKN2Q8IZC4 609 aa11.23□□□□□ -0.61
RTL1-201ENST00000534062 JDP2Q8WYK2 163 aa11.23□□□□□ -0.61
RTL1-201ENST00000534062 DDX11Q96FC9 970 aa11.23□□□□□ -0.61
RTL1-201ENST00000534062 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.23□□□□□ -0.61
RTL1-201ENST00000534062 CACNA1SQ13698 1873 aa11.23□□□□□ -0.61
RTL1-201ENST00000534062 IFIT3O14879 490 aaKnown RBP11.23□□□□□ -0.61
RTL1-201ENST00000534062 PPARAQ07869 468 aa11.23□□□□□ -0.61
RTL1-201ENST00000534062 PODNQ7Z5L7 613 aa11.23□□□□□ -0.61
RTL1-201ENST00000534062 ZNF384Q8TF68 577 aa11.23□□□□□ -0.61
RTL1-201ENST00000534062 TPCN1Q9ULQ1 816 aa11.23□□□□□ -0.61
RTL1-201ENST00000534062 SLC3A2P08195 630 aaKnown RBP11.23□□□□□ -0.61
RTL1-201ENST00000534062 UBAC1Q9BSL1 405 aa11.23□□□□□ -0.61
RTL1-201ENST00000534062 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.23□□□□□ -0.61
RTL1-201ENST00000534062 VPS37CA5D8V6 355 aaPredicted RBP11.22□□□□□ -0.61
RTL1-201ENST00000534062 CPLX1O14810 134 aa11.22□□□□□ -0.61
RTL1-201ENST00000534062 FOXP2O15409 715 aa11.22□□□□□ -0.61
RTL1-201ENST00000534062 USP17L8P0C7I0 530 aa11.22□□□□□ -0.61
RTL1-201ENST00000534062 RXRAP19793 462 aa11.22□□□□□ -0.61
RTL1-201ENST00000534062 ME3Q16798 604 aa11.22□□□□□ -0.61
RTL1-201ENST00000534062 NIM1KQ8IY84 436 aa11.22□□□□□ -0.61
RTL1-201ENST00000534062 ZSCAN31Q96LW9 406 aaPredicted RBP11.22□□□□□ -0.61
RTL1-201ENST00000534062 RIOK1Q9BRS2 568 aaKnown RBP11.22□□□□□ -0.61
RTL1-201ENST00000534062 SPON1Q9HCB6 807 aa11.22□□□□□ -0.61
RTL1-201ENST00000534062 CASZ1Q86V15 1759 aa11.22□□□□□ -0.61
RTL1-201ENST00000534062 ANKRD31Q8N7Z5 1873 aa11.22□□□□□ -0.61
RTL1-201ENST00000534062 SMIM22K7EJ46 135 aa11.22□□□□□ -0.61
RTL1-201ENST00000534062 CYP2D6P10635 497 aa11.22□□□□□ -0.61
RTL1-201ENST00000534062 CBX1P83916 185 aa11.22□□□□□ -0.61
RTL1-201ENST00000534062 SART3Q15020 963 aaKnown RBP11.22□□□□□ -0.61
RTL1-201ENST00000534062 TTC14Q96N46 770 aa11.22□□□□□ -0.61
RTL1-201ENST00000534062 RNF41Q9H4P4 317 aaPredicted RBP11.22□□□□□ -0.61
RTL1-201ENST00000534062 MKNK2Q9HBH9 465 aa11.22□□□□□ -0.61
RTL1-201ENST00000534062 KIF3AQ9Y496 699 aa11.22□□□□□ -0.61
RTL1-201ENST00000534062 TMEM67Q5HYA8 995 aa11.22□□□□□ -0.61
RTL1-201ENST00000534062 AKNAD1Q5T1N1 836 aa11.22□□□□□ -0.61
RTL1-201ENST00000534062 FAM184AQ8NB25 1140 aa11.22□□□□□ -0.61
RTL1-201ENST00000534062 KLF18A0A0U1RQI7 1052 aa11.21□□□□□ -0.61
RTL1-201ENST00000534062 USP17L3A6NCW0 530 aa11.21□□□□□ -0.61
RTL1-201ENST00000534062 USP17L4A6NCW7 530 aa11.21□□□□□ -0.61
RTL1-201ENST00000534062 SYNE3Q6ZMZ3 975 aa11.21□□□□□ -0.61
RTL1-201ENST00000534062 C15orf52Q6ZUT6 534 aaKnown RBP11.21□□□□□ -0.61
RTL1-201ENST00000534062 USP17L1Q7RTZ2 530 aa11.21□□□□□ -0.61
RTL1-201ENST00000534062 NUP133Q8WUM0 1156 aa11.21□□□□□ -0.61
RTL1-201ENST00000534062 TEKT1Q969V4 418 aa11.21□□□□□ -0.61
RTL1-201ENST00000534062 GTPBP4Q9BZE4 634 aaKnown RBP11.21□□□□□ -0.61
RTL1-201ENST00000534062 MROH7-TTC4A0A0A0MT08 1334 aa11.21□□□□□ -0.61
RTL1-201ENST00000534062 DDX11L8A8MPP1 907 aa11.21□□□□□ -0.61
RTL1-201ENST00000534062 GOLGA8BA8MQT2 603 aa11.21□□□□□ -0.61
RTL1-201ENST00000534062 CACNB3P54284 484 aa11.21□□□□□ -0.61
RTL1-201ENST00000534062 TCP10Q12799 353 aa11.21□□□□□ -0.61
RTL1-201ENST00000534062 MICU3Q86XE3 530 aa11.21□□□□□ -0.61
RTL1-201ENST00000534062 TAOK3Q9H2K8 898 aa11.21□□□□□ -0.61
RTL1-201ENST00000534062 NCOA5Q9HCD5 579 aaKnown RBP11.21□□□□□ -0.61
RTL1-201ENST00000534062 SH2B1Q9NRF2 756 aaPredicted RBP11.21□□□□□ -0.61
RTL1-201ENST00000534062 NEDD4P46934 1319 aa11.21□□□□□ -0.62
RTL1-201ENST00000534062 TGFB2P61812 414 aa11.21□□□□□ -0.62
RTL1-201ENST00000534062 DCP1AQ9NPI6 582 aaPredicted RBP11.21□□□□□ -0.62
RTL1-201ENST00000534062 USP40Q9NVE5 1235 aa11.21□□□□□ -0.62
RTL1-201ENST00000534062 SLX4Q8IY92 1834 aa11.21□□□□□ -0.62
RTL1-201ENST00000534062 CCDC69A6NI79 296 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 NASPP49321 788 aaPredicted RBP11.2□□□□□ -0.62
RTL1-201ENST00000534062 RBM26Q5T8P6 1007 aaKnown RBP11.2□□□□□ -0.62
RTL1-201ENST00000534062 CERS5Q8N5B7 392 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 TSPY2A6NKD2 308 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 KIAA2012Q0VF49 1180 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 CCDC82Q8N4S0 544 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 OGFOD1Q8N543 542 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 NLGN2Q8NFZ4 835 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 MYL10Q9BUA6 226 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 KRT23Q9C075 422 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 ZBTB12Q9Y330 459 aaPredicted RBP11.2□□□□□ -0.62
RTL1-201ENST00000534062 GJA3Q9Y6H8 435 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 RPAP1Q9BWH6 1393 aaPredicted RBP11.2□□□□□ -0.62
RTL1-201ENST00000534062 LETM1O95202 739 aaPredicted RBP11.2□□□□□ -0.62
RTL1-201ENST00000534062 PTMAP06454 111 aaKnown RBP11.2□□□□□ -0.62
RTL1-201ENST00000534062 PLCG2P16885 1265 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 TOB2Q14106 344 aaPredicted RBP11.2□□□□□ -0.62
RTL1-201ENST00000534062 KCNB2Q92953 911 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 PDS5AQ29RF7 1337 aaKnown RBP11.2□□□□□ -0.62
RTL1-201ENST00000534062 IRS2Q9Y4H2 1338 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 H3BQV1 296 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 GJB2P29033 226 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 PDE4BQ07343 736 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 PKP1Q13835 747 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 FAM47AQ5JRC9 791 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 IFFO2Q5TF58 517 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 ARHGAP27Q6ZUM4 889 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 ESR2Q92731 530 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 DYNLL2Q96FJ2 89 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 TRIM34Q9BYJ4 488 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 CNNM2Q9H8M5 875 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 DAGLAQ9Y4D2 1042 aa11.2□□□□□ -0.62
RTL1-201ENST00000534062 RAD21O60216 631 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms