RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 PAG1Q9NWQ8 432 aa16.24■□□□□ 0.19
CAPN1-227ENST00000533909 RHBDL3P58872 404 aa16.23■□□□□ 0.19
CAPN1-227ENST00000533909 SREBF2Q12772 1141 aa16.23■□□□□ 0.19
CAPN1-227ENST00000533909 SLC9C2Q5TAH2 1124 aa16.23■□□□□ 0.19
CAPN1-227ENST00000533909 ANKRD45Q5TZF3 282 aa16.23■□□□□ 0.19
CAPN1-227ENST00000533909 SPRYD7Q5W111 196 aa16.23■□□□□ 0.19
CAPN1-227ENST00000533909 SH3RF3Q8TEJ3 882 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-227ENST00000533909 ZIC5Q96T25 663 aa16.23■□□□□ 0.19
CAPN1-227ENST00000533909 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.23■□□□□ 0.19
CAPN1-227ENST00000533909 ZBTB48P10074 688 aaPredicted RBP16.22■□□□□ 0.19
CAPN1-227ENST00000533909 ZFPM1Q8IX07 1006 aa16.22■□□□□ 0.19
CAPN1-227ENST00000533909 MIGA1Q8NAN2 632 aa16.22■□□□□ 0.19
CAPN1-227ENST00000533909 HAUS7Q99871 368 aa16.22■□□□□ 0.19
CAPN1-227ENST00000533909 DDX4Q9NQI0 724 aaKnown RBP16.22■□□□□ 0.19
CAPN1-227ENST00000533909 ERC2O15083 957 aa16.21■□□□□ 0.19
CAPN1-227ENST00000533909 NPM3O75607 178 aaKnown RBP16.21■□□□□ 0.19
CAPN1-227ENST00000533909 PDE6AP16499 860 aa16.21■□□□□ 0.19
CAPN1-227ENST00000533909 PPP4CP60510 307 aa16.21■□□□□ 0.19
CAPN1-227ENST00000533909 IRX6P78412 446 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-227ENST00000533909 VGLL4Q14135 290 aa16.21■□□□□ 0.19
CAPN1-227ENST00000533909 ADGRA1Q86SQ6 560 aa16.21■□□□□ 0.19
CAPN1-227ENST00000533909 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.21■□□□□ 0.19
CAPN1-227ENST00000533909 WNK4Q96J92 1243 aa16.21■□□□□ 0.19
CAPN1-227ENST00000533909 TRIM34Q9BYJ4 488 aa16.21■□□□□ 0.19
CAPN1-227ENST00000533909 RFX7Q2KHR2 1363 aa16.21■□□□□ 0.19
CAPN1-227ENST00000533909 MANSC4A6NHS7 340 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-227ENST00000533909 USP5P45974 858 aa16.2■□□□□ 0.18
CAPN1-227ENST00000533909 LBX1P52954 281 aa16.2■□□□□ 0.18
CAPN1-227ENST00000533909 DYNLL1P63167 89 aaKnown RBP16.2■□□□□ 0.18
CAPN1-227ENST00000533909 ZSCAN25Q6NSZ9 544 aa16.2■□□□□ 0.18
CAPN1-227ENST00000533909 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-227ENST00000533909 MAPKAPK5Q8IW41 473 aa16.2■□□□□ 0.18
CAPN1-227ENST00000533909 TGFBRAP1Q8WUH2 860 aa16.2■□□□□ 0.18
CAPN1-227ENST00000533909 ZKSCAN4Q969J2 545 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-227ENST00000533909 OPTNQ96CV9 577 aa16.2■□□□□ 0.18
CAPN1-227ENST00000533909 EDC3Q96F86 508 aaKnown RBP16.2■□□□□ 0.18
CAPN1-227ENST00000533909 OSBPL5Q9H0X9 879 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-227ENST00000533909 MAGEB6P1A0A0J9YX57 407 aa16.19■□□□□ 0.18
CAPN1-227ENST00000533909 DDTLA6NHG4 134 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-227ENST00000533909 TSHZ3Q63HK5 1081 aa16.19■□□□□ 0.18
CAPN1-227ENST00000533909 OTUD5Q96G74 571 aa16.19■□□□□ 0.18
CAPN1-227ENST00000533909 DHX36Q9H2U1 1008 aaKnown RBP16.19■□□□□ 0.18
CAPN1-227ENST00000533909 TSKSQ9UJT2 592 aa16.19■□□□□ 0.18
CAPN1-227ENST00000533909 TTC41PQ6P2S7 1318 aa16.19■□□□□ 0.18
CAPN1-227ENST00000533909 ZNF532Q9HCE3 1301 aa16.19■□□□□ 0.18
CAPN1-227ENST00000533909 MYO5AQ9Y4I1 1855 aaKnown RBP16.18■□□□□ 0.18
CAPN1-227ENST00000533909 TRPA1O75762 1119 aa16.18■□□□□ 0.18
CAPN1-227ENST00000533909 HSPA8P11142 646 aaKnown RBP16.18■□□□□ 0.18
CAPN1-227ENST00000533909 MX1P20591 662 aa16.18■□□□□ 0.18
CAPN1-227ENST00000533909 INHBEP58166 350 aa16.18■□□□□ 0.18
CAPN1-227ENST00000533909 LRRFIP1Q32MZ4 808 aaKnown RBP16.18■□□□□ 0.18
CAPN1-227ENST00000533909 ERO1BQ86YB8 467 aa16.18■□□□□ 0.18
CAPN1-227ENST00000533909 CRNKL1Q9BZJ0 848 aaKnown RBP16.18■□□□□ 0.18
CAPN1-227ENST00000533909 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.18■□□□□ 0.18
CAPN1-227ENST00000533909 PICK1Q9NRD5 415 aa16.18■□□□□ 0.18
CAPN1-227ENST00000533909 SAGE1Q9NXZ1 904 aa16.18■□□□□ 0.18
CAPN1-227ENST00000533909 FLT1P17948 1338 aa16.18■□□□□ 0.18
CAPN1-227ENST00000533909 DOCK2Q92608 1830 aa16.17■□□□□ 0.18
CAPN1-227ENST00000533909 ATRNL1Q5VV63 1379 aa16.17■□□□□ 0.18
CAPN1-227ENST00000533909 GLRX3O76003 335 aaKnown RBP16.17■□□□□ 0.18
CAPN1-227ENST00000533909 HLA-DOAP06340 250 aa16.17■□□□□ 0.18
CAPN1-227ENST00000533909 INPP5BP32019 993 aa16.17■□□□□ 0.18
CAPN1-227ENST00000533909 OTUD7BQ6GQQ9 843 aa16.17■□□□□ 0.18
CAPN1-227ENST00000533909 B4GALNT3Q6L9W6 998 aa16.17■□□□□ 0.18
CAPN1-227ENST00000533909 SH3BP5LQ7L8J4 393 aa16.17■□□□□ 0.18
CAPN1-227ENST00000533909 CRACR2BQ8N4Y2 399 aaPredicted RBP16.17■□□□□ 0.18
CAPN1-227ENST00000533909 RNF186Q9NXI6 227 aa16.17■□□□□ 0.18
CAPN1-227ENST00000533909 OTOFQ9HC10 1997 aa16.17■□□□□ 0.18
CAPN1-227ENST00000533909 COL2A1P02458 1487 aaPredicted RBP16.16■□□□□ 0.18
CAPN1-227ENST00000533909 SPDYE5A6NIY4 337 aa16.16■□□□□ 0.18
CAPN1-227ENST00000533909 ALDH1A1P00352 501 aa16.16■□□□□ 0.18
CAPN1-227ENST00000533909 TM4SF4P48230 202 aa16.16■□□□□ 0.18
CAPN1-227ENST00000533909 GTF2A2P52657 109 aa16.16■□□□□ 0.18
CAPN1-227ENST00000533909 PRDM10Q9NQV6 1147 aa16.16■□□□□ 0.18
CAPN1-227ENST00000533909 PI4KBQ9UBF8 816 aa16.16■□□□□ 0.18
CAPN1-227ENST00000533909 SAP30BPQ9UHR5 308 aaKnown RBP16.16■□□□□ 0.18
CAPN1-227ENST00000533909 SNCAIPQ9Y6H5 919 aa16.16■□□□□ 0.18
CAPN1-227ENST00000533909 ADD2P35612 726 aa16.15■□□□□ 0.18
CAPN1-227ENST00000533909 OTUD7AQ8TE49 926 aaPredicted RBP16.15■□□□□ 0.18
CAPN1-227ENST00000533909 CNKSR2Q8WXI2 1034 aa16.15■□□□□ 0.18
CAPN1-227ENST00000533909 DDRGK1Q96HY6 314 aa16.15■□□□□ 0.18
CAPN1-227ENST00000533909 HERC5Q9UII4 1024 aaKnown RBP16.15■□□□□ 0.18
CAPN1-227ENST00000533909 ZNF112Q9UJU3 913 aa16.15■□□□□ 0.18
CAPN1-227ENST00000533909 PALD1Q9ULE6 856 aa16.15■□□□□ 0.18
CAPN1-227ENST00000533909 CCL15-CCL14A0A0B4J2E2 113 aa16.14■□□□□ 0.17
CAPN1-227ENST00000533909 TBC1D12O60347 775 aa16.14■□□□□ 0.17
CAPN1-227ENST00000533909 PPATQ06203 517 aa16.14■□□□□ 0.17
CAPN1-227ENST00000533909 PPIL2Q13356 520 aa16.14■□□□□ 0.17
CAPN1-227ENST00000533909 SNAPC2Q13487 334 aa16.14■□□□□ 0.17
CAPN1-227ENST00000533909 CCL15Q16663 113 aa16.14■□□□□ 0.17
CAPN1-227ENST00000533909 SLC4A8Q2Y0W8 1093 aa16.14■□□□□ 0.17
CAPN1-227ENST00000533909 NOL9Q5SY16 702 aaKnown RBP16.14■□□□□ 0.17
CAPN1-227ENST00000533909 KBTBD3Q8NAB2 608 aa16.14■□□□□ 0.17
CAPN1-227ENST00000533909 LNPKQ9C0E8 428 aa16.14■□□□□ 0.17
CAPN1-227ENST00000533909 TCRBV5S4A2TA0A5A2 114 aa16.13■□□□□ 0.17
CAPN1-227ENST00000533909 FAM196BA6NMK8 535 aa16.13■□□□□ 0.17
CAPN1-227ENST00000533909 CTNND1O60716 968 aaKnown RBP16.13■□□□□ 0.17
CAPN1-227ENST00000533909 MBD4O95243 580 aa16.13■□□□□ 0.17
CAPN1-227ENST00000533909 POLR3DP05423 398 aaPredicted RBP16.13■□□□□ 0.17
CAPN1-227ENST00000533909 CETPP11597 493 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms