RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 LRRC24Q50LG9 513 aa15.58■□□□□ 0.08
SVIP-205ENST00000533774 HHIPL2Q6UWX4 724 aa15.58■□□□□ 0.08
SVIP-205ENST00000533774 NECAB2Q7Z6G3 386 aa15.58■□□□□ 0.08
SVIP-205ENST00000533774 ZFPM1Q8IX07 1006 aa15.58■□□□□ 0.08
SVIP-205ENST00000533774 TBC1D22AQ8WUA7 517 aa15.58■□□□□ 0.08
SVIP-205ENST00000533774 SPTBN5Q9NRC6 3674 aaKnown RBP15.57■□□□□ 0.08
SVIP-205ENST00000533774 A0A0G2JLL6 359 aaPredicted RBP15.57■□□□□ 0.08
SVIP-205ENST00000533774 CXCL11O14625 94 aa15.57■□□□□ 0.08
SVIP-205ENST00000533774 SLURP2P0DP57 97 aa15.57■□□□□ 0.08
SVIP-205ENST00000533774 PRRT2Q7Z6L0 340 aaPredicted RBP15.57■□□□□ 0.08
SVIP-205ENST00000533774 VGLL2Q8N8G2 317 aa15.57■□□□□ 0.08
SVIP-205ENST00000533774 SUCLG2Q96I99 432 aa15.57■□□□□ 0.08
SVIP-205ENST00000533774 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.57■□□□□ 0.08
SVIP-205ENST00000533774 FAM198AQ9UFP1 575 aa15.57■□□□□ 0.08
SVIP-205ENST00000533774 ATRNL1Q5VV63 1379 aa15.57■□□□□ 0.08
SVIP-205ENST00000533774 PRUNE2Q8WUY3 3088 aa15.57■□□□□ 0.08
SVIP-205ENST00000533774 PHF20L1A8MW92 1017 aa15.56■□□□□ 0.08
SVIP-205ENST00000533774 TNPO2O14787 897 aaKnown RBP15.56■□□□□ 0.08
SVIP-205ENST00000533774 VAMP4O75379 141 aa15.56■□□□□ 0.08
SVIP-205ENST00000533774 TRIM32Q13049 653 aa15.56■□□□□ 0.08
SVIP-205ENST00000533774 CDC42EP5Q6NZY7 148 aa15.56■□□□□ 0.08
SVIP-205ENST00000533774 VPS37DQ86XT2 251 aa15.56■□□□□ 0.08
SVIP-205ENST00000533774 TDHQ8IZJ6 230 aa15.56■□□□□ 0.08
SVIP-205ENST00000533774 TAOK2Q9UL54 1235 aa15.56■□□□□ 0.08
SVIP-205ENST00000533774 DAGLAQ9Y4D2 1042 aa15.56■□□□□ 0.08
SVIP-205ENST00000533774 DNAH12Q6ZR08 3092 aa15.55■□□□□ 0.08
SVIP-205ENST00000533774 ATAD5Q96QE3 1844 aa15.55■□□□□ 0.08
SVIP-205ENST00000533774 FRAT2O75474 233 aaPredicted RBP15.55■□□□□ 0.08
SVIP-205ENST00000533774 DIXDC1Q155Q3 683 aa15.55■□□□□ 0.08
SVIP-205ENST00000533774 GADL1Q6ZQY3 521 aa15.55■□□□□ 0.08
SVIP-205ENST00000533774 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.55■□□□□ 0.08
SVIP-205ENST00000533774 WWC1Q8IX03 1113 aa15.55■□□□□ 0.08
SVIP-205ENST00000533774 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.55■□□□□ 0.08
SVIP-205ENST00000533774 AFG3L2Q9Y4W6 797 aa15.55■□□□□ 0.08
SVIP-205ENST00000533774 ZHX2Q9Y6X8 837 aa15.55■□□□□ 0.08
SVIP-205ENST00000533774 MROH5Q6ZUA9 1318 aa15.54■□□□□ 0.08
SVIP-205ENST00000533774 CAPN2P17655 700 aa15.54■□□□□ 0.08
SVIP-205ENST00000533774 PTPRAP18433 802 aa15.54■□□□□ 0.08
SVIP-205ENST00000533774 GUCD1Q96NT3 240 aa15.54■□□□□ 0.08
SVIP-205ENST00000533774 FRMPD3Q5JV73 1810 aa15.54■□□□□ 0.08
SVIP-205ENST00000533774 LOC285556D6RIA3 1793 aa15.54■□□□□ 0.08
SVIP-205ENST00000533774 MAST3O60307 1309 aa15.53■□□□□ 0.08
SVIP-205ENST00000533774 CCDC84Q86UT8 332 aaPredicted RBP15.53■□□□□ 0.08
SVIP-205ENST00000533774 ANKRD13CQ8N6S4 541 aa15.53■□□□□ 0.08
SVIP-205ENST00000533774 ANKLE1Q8NAG6 615 aa15.53■□□□□ 0.08
SVIP-205ENST00000533774 SUGT1Q9Y2Z0 365 aa15.53■□□□□ 0.08
SVIP-205ENST00000533774 PFASO15067 1338 aa15.52■□□□□ 0.08
SVIP-205ENST00000533774 FANCIQ9NVI1 1328 aa15.52■□□□□ 0.08
SVIP-205ENST00000533774 PDE8BO95263 885 aa15.52■□□□□ 0.08
SVIP-205ENST00000533774 CAVIN4Q5BKX8 364 aa15.52■□□□□ 0.08
SVIP-205ENST00000533774 METTL24Q5JXM2 366 aa15.52■□□□□ 0.08
SVIP-205ENST00000533774 SH3BP5LQ7L8J4 393 aa15.52■□□□□ 0.08
SVIP-205ENST00000533774 FASTKD5Q7L8L6 764 aaKnown RBP15.52■□□□□ 0.08
SVIP-205ENST00000533774 SCYL3Q8IZE3 742 aa15.52■□□□□ 0.08
SVIP-205ENST00000533774 KLHDC4Q8TBB5 520 aa15.52■□□□□ 0.08
SVIP-205ENST00000533774 UBE2OQ9C0C9 1292 aaKnown RBP15.52■□□□□ 0.08
SVIP-205ENST00000533774 NBPF3Q9H094 633 aa15.52■□□□□ 0.08
SVIP-205ENST00000533774 PRKRIP1Q9H875 184 aaPredicted RBP15.52■□□□□ 0.08
SVIP-205ENST00000533774 C9orf78Q9NZ63 289 aaPredicted RBP15.52■□□□□ 0.08
SVIP-205ENST00000533774 SLC45A1Q9Y2W3 748 aa15.52■□□□□ 0.08
SVIP-205ENST00000533774 NBPF7P0C2Y1 421 aaPredicted RBP15.51■□□□□ 0.07
SVIP-205ENST00000533774 FGFR2P21802 821 aa15.51■□□□□ 0.07
SVIP-205ENST00000533774 CCDC27Q2M243 656 aa15.51■□□□□ 0.07
SVIP-205ENST00000533774 TREML2Q5T2D2 321 aa15.51■□□□□ 0.07
SVIP-205ENST00000533774 ANKRD44Q8N8A2 993 aa15.51■□□□□ 0.07
SVIP-205ENST00000533774 C11orf49Q9H6J7 331 aa15.51■□□□□ 0.07
SVIP-205ENST00000533774 GJD2Q9UKL4 321 aa15.51■□□□□ 0.07
SVIP-205ENST00000533774 COL2A1P02458 1487 aaPredicted RBP15.51■□□□□ 0.07
SVIP-205ENST00000533774 RPTORQ8N122 1335 aa15.5■□□□□ 0.07
SVIP-205ENST00000533774 POTEB2H3BUK9 544 aa15.5■□□□□ 0.07
SVIP-205ENST00000533774 HMGCRP04035 888 aa15.5■□□□□ 0.07
SVIP-205ENST00000533774 PRDX5P30044 214 aa15.5■□□□□ 0.07
SVIP-205ENST00000533774 SMCR8Q8TEV9 937 aaPredicted RBP15.5■□□□□ 0.07
SVIP-205ENST00000533774 COA7Q96BR5 231 aa15.5■□□□□ 0.07
SVIP-205ENST00000533774 BICC1Q9H694 974 aaKnown RBP15.5■□□□□ 0.07
SVIP-205ENST00000533774 USP40Q9NVE5 1235 aa15.5■□□□□ 0.07
SVIP-205ENST00000533774 IL16Q14005 1332 aa15.49■□□□□ 0.07
SVIP-205ENST00000533774 TRIM75PA6NK02 468 aa15.49■□□□□ 0.07
SVIP-205ENST00000533774 ALDH1L1O75891 902 aa15.49■□□□□ 0.07
SVIP-205ENST00000533774 MAP3K10Q02779 954 aa15.49■□□□□ 0.07
SVIP-205ENST00000533774 EXOSC9Q06265 439 aaKnown RBP15.49■□□□□ 0.07
SVIP-205ENST00000533774 RABL6Q3YEC7 729 aaPredicted RBP15.49■□□□□ 0.07
SVIP-205ENST00000533774 FAM161BQ96MY7 647 aa15.49■□□□□ 0.07
SVIP-205ENST00000533774 OGDHLQ9ULD0 1010 aa15.49■□□□□ 0.07
SVIP-205ENST00000533774 MAST2Q6P0Q8 1798 aa15.49■□□□□ 0.07
SVIP-205ENST00000533774 RFX7Q2KHR2 1363 aa15.49■□□□□ 0.07
SVIP-205ENST00000533774 LTBP2Q14767 1821 aa15.48■□□□□ 0.07
SVIP-205ENST00000533774 RGS3P49796 1198 aa15.48■□□□□ 0.07
SVIP-205ENST00000533774 FAM110CQ1W6H9 321 aa15.48■□□□□ 0.07
SVIP-205ENST00000533774 CCDC184Q52MB2 194 aa15.48■□□□□ 0.07
SVIP-205ENST00000533774 HMX1Q9NP08 348 aaPredicted RBP15.48■□□□□ 0.07
SVIP-205ENST00000533774 PICK1Q9NRD5 415 aa15.48■□□□□ 0.07
SVIP-205ENST00000533774 AGTPBP1Q9UPW5 1226 aa15.48■□□□□ 0.07
SVIP-205ENST00000533774 TTC28Q96AY4 2481 aa15.48■□□□□ 0.07
SVIP-205ENST00000533774 UTYO14607 1347 aa15.47■□□□□ 0.07
SVIP-205ENST00000533774 KIF16BQ96L93 1317 aa15.47■□□□□ 0.07
SVIP-205ENST00000533774 DDTLA6NHG4 134 aaPredicted RBP15.47■□□□□ 0.07
SVIP-205ENST00000533774 MDM2Q00987 491 aaPredicted RBP15.47■□□□□ 0.07
SVIP-205ENST00000533774 SLC4A10Q6U841 1118 aa15.47■□□□□ 0.07
SVIP-205ENST00000533774 WDR66Q8TBY9 1149 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms