RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 SMG6Q86US8 1419 aaKnown RBP8.2□□□□□ -1.1
SOX6-216ENST00000533658 KIF20BQ96Q89 1820 aa8.19□□□□□ -1.1
SOX6-216ENST00000533658 C5P01031 1676 aa8.19□□□□□ -1.1
SOX6-216ENST00000533658 SKIP12755 728 aa8.19□□□□□ -1.1
SOX6-216ENST00000533658 EML3Q32P44 896 aa8.19□□□□□ -1.1
SOX6-216ENST00000533658 PIGBQ92521 554 aa8.19□□□□□ -1.1
SOX6-216ENST00000533658 POM121Q96HA1 1249 aa8.19□□□□□ -1.1
SOX6-216ENST00000533658 IQSEC3Q9UPP2 1182 aaPredicted RBP8.19□□□□□ -1.1
SOX6-216ENST00000533658 PALLDQ8WX93 1383 aa8.19□□□□□ -1.1
SOX6-216ENST00000533658 PCNTO95613 3336 aa8.19□□□□□ -1.1
SOX6-216ENST00000533658 TOGARAM1Q9Y4F4 1720 aa8.18□□□□□ -1.1
SOX6-216ENST00000533658 LZTS3O60299 673 aaPredicted RBP8.18□□□□□ -1.1
SOX6-216ENST00000533658 SSTR4P31391 388 aa8.18□□□□□ -1.1
SOX6-216ENST00000533658 JAG1P78504 1218 aa8.18□□□□□ -1.1
SOX6-216ENST00000533658 EIF4A2Q14240 407 aaKnown RBP8.18□□□□□ -1.1
SOX6-216ENST00000533658 KRTAP5-3Q6L8H2 238 aa8.18□□□□□ -1.1
SOX6-216ENST00000533658 CCER1Q8TC90 406 aaPredicted RBP8.18□□□□□ -1.1
SOX6-216ENST00000533658 PANK3Q9H999 370 aa8.18□□□□□ -1.1
SOX6-216ENST00000533658 PODXL2Q9NZ53 605 aa8.18□□□□□ -1.1
SOX6-216ENST00000533658 ASAP1Q9ULH1 1129 aa8.18□□□□□ -1.1
SOX6-216ENST00000533658 IGSF1Q8N6C5 1336 aa8.18□□□□□ -1.1
SOX6-216ENST00000533658 PCDH11XQ9BZA7 1347 aa8.18□□□□□ -1.1
SOX6-216ENST00000533658 PCDH11YQ9BZA8 1340 aa8.18□□□□□ -1.1
SOX6-216ENST00000533658 CICQ96RK0 1608 aaPredicted RBP8.18□□□□□ -1.1
SOX6-216ENST00000533658 CD97P48960 835 aa8.17□□□□□ -1.1
SOX6-216ENST00000533658 ITPK1Q13572 414 aa8.17□□□□□ -1.1
SOX6-216ENST00000533658 CDCA8Q53HL2 280 aa8.17□□□□□ -1.1
SOX6-216ENST00000533658 AEBP1Q8IUX7 1158 aa8.17□□□□□ -1.1
SOX6-216ENST00000533658 FMR1NBQ8N0W7 255 aaPredicted RBP8.17□□□□□ -1.1
SOX6-216ENST00000533658 LINC00116Q8NCU8 138 aa8.17□□□□□ -1.1
SOX6-216ENST00000533658 ALG2Q9H553 416 aa8.17□□□□□ -1.1
SOX6-216ENST00000533658 NOD1Q9Y239 953 aa8.17□□□□□ -1.1
SOX6-216ENST00000533658 CGNL1Q0VF96 1302 aa8.17□□□□□ -1.1
SOX6-216ENST00000533658 SPEM2Q0P670 501 aa8.16□□□□□ -1.1
SOX6-216ENST00000533658 SFSWAPQ12872 951 aaKnown RBP8.16□□□□□ -1.1
SOX6-216ENST00000533658 WASHC2AQ641Q2 1341 aa8.16□□□□□ -1.1
SOX6-216ENST00000533658 USP3Q9Y6I4 520 aa8.16□□□□□ -1.1
SOX6-216ENST00000533658 OAS3Q9Y6K5 1087 aaKnown RBP8.16□□□□□ -1.1
SOX6-216ENST00000533658 C4BP0C0L5 1744 aa8.15□□□□□ -1.1
SOX6-216ENST00000533658 PHKG2P15735 406 aa8.15□□□□□ -1.1
SOX6-216ENST00000533658 MTFR1Q15390 333 aa8.15□□□□□ -1.1
SOX6-216ENST00000533658 LCE4AQ5TA78 99 aa8.15□□□□□ -1.1
SOX6-216ENST00000533658 PRR23CQ6ZRP0 262 aa8.15□□□□□ -1.1
SOX6-216ENST00000533658 NFATC2IPQ8NCF5 419 aa8.15□□□□□ -1.1
SOX6-216ENST00000533658 FLAD1Q8NFF5 587 aa8.15□□□□□ -1.1
SOX6-216ENST00000533658 WFDC12Q8WWY7 111 aa8.15□□□□□ -1.1
SOX6-216ENST00000533658 SLC4A9Q96Q91 983 aa8.15□□□□□ -1.1
SOX6-216ENST00000533658 PXDNLA1KZ92 1463 aa8.14□□□□□ -1.11
SOX6-216ENST00000533658 LOC102724428A0A0B4J2F2 783 aa8.14□□□□□ -1.11
SOX6-216ENST00000533658 PIK3CDO00329 1044 aa8.14□□□□□ -1.11
SOX6-216ENST00000533658 CDK2AP1O14519 115 aa8.14□□□□□ -1.11
SOX6-216ENST00000533658 SIK1P57059 783 aa8.14□□□□□ -1.11
SOX6-216ENST00000533658 LRRC69Q6ZNQ3 347 aa8.14□□□□□ -1.11
SOX6-216ENST00000533658 RAB44Q7Z6P3 723 aaPredicted RBP8.14□□□□□ -1.11
SOX6-216ENST00000533658 JPH1Q9HDC5 661 aaPredicted RBP8.14□□□□□ -1.11
SOX6-216ENST00000533658 ATG3Q9NT62 314 aa8.14□□□□□ -1.11
SOX6-216ENST00000533658 TMOD3Q9NYL9 352 aa8.14□□□□□ -1.11
SOX6-216ENST00000533658 SERTAD1Q9UHV2 236 aa8.14□□□□□ -1.11
SOX6-216ENST00000533658 SPG7Q9UQ90 795 aa8.14□□□□□ -1.11
SOX6-216ENST00000533658 NCAPD2Q15021 1401 aa8.13□□□□□ -1.11
SOX6-216ENST00000533658 TAF1LQ8IZX4 1826 aa8.13□□□□□ -1.11
SOX6-216ENST00000533658 A6NJY4 79 aa8.13□□□□□ -1.11
SOX6-216ENST00000533658 TXLNAP40222 546 aa8.13□□□□□ -1.11
SOX6-216ENST00000533658 IREB2P48200 963 aaKnown RBP8.13□□□□□ -1.11
SOX6-216ENST00000533658 SLC51AQ86UW1 340 aa8.13□□□□□ -1.11
SOX6-216ENST00000533658 DNAJC5GQ8N7S2 189 aa8.13□□□□□ -1.11
SOX6-216ENST00000533658 UBR3Q6ZT12 1888 aa8.13□□□□□ -1.11
SOX6-216ENST00000533658 PKD1L3Q7Z443 1732 aa8.12□□□□□ -1.11
SOX6-216ENST00000533658 BACH1O14867 736 aa8.12□□□□□ -1.11
SOX6-216ENST00000533658 PTCD1O75127 700 aaKnown RBP8.12□□□□□ -1.11
SOX6-216ENST00000533658 FSTP19883 344 aa8.12□□□□□ -1.11
SOX6-216ENST00000533658 SSFA2P28290 1259 aa8.12□□□□□ -1.11
SOX6-216ENST00000533658 NOS3P29474 1203 aa8.12□□□□□ -1.11
SOX6-216ENST00000533658 HDGFL1Q5TGJ6 251 aa8.12□□□□□ -1.11
SOX6-216ENST00000533658 ZNF530Q6P9A1 599 aaPredicted RBP8.12□□□□□ -1.11
SOX6-216ENST00000533658 MORC1Q86VD1 984 aa8.12□□□□□ -1.11
SOX6-216ENST00000533658 IFNL2Q8IZJ0 200 aa8.12□□□□□ -1.11
SOX6-216ENST00000533658 MEGF10Q96KG7 1140 aa8.12□□□□□ -1.11
SOX6-216ENST00000533658 PARP3Q9Y6F1 533 aa8.12□□□□□ -1.11
SOX6-216ENST00000533658 MAP2P11137 1827 aaKnown RBP8.12□□□□□ -1.11
SOX6-216ENST00000533658 ITGB4P16144 1822 aa8.12□□□□□ -1.11
SOX6-216ENST00000533658 ANKRD26Q9UPS8 1709 aa8.12□□□□□ -1.11
SOX6-216ENST00000533658 KDM6AO15550 1401 aaPredicted RBP8.12□□□□□ -1.11
SOX6-216ENST00000533658 C10orf71Q711Q0 1435 aa8.12□□□□□ -1.11
SOX6-216ENST00000533658 KIF24Q5T7B8 1368 aa8.11□□□□□ -1.11
SOX6-216ENST00000533658 USP17L5A8MUK1 530 aa8.11□□□□□ -1.11
SOX6-216ENST00000533658 TOMM70O94826 608 aa8.11□□□□□ -1.11
SOX6-216ENST00000533658 GP2P55259 537 aaKnown RBP8.11□□□□□ -1.11
SOX6-216ENST00000533658 NCOA4Q13772 614 aa8.11□□□□□ -1.11
SOX6-216ENST00000533658 TRIM50Q86XT4 487 aa8.11□□□□□ -1.11
SOX6-216ENST00000533658 SMARCC1Q92922 1105 aaPredicted RBP8.11□□□□□ -1.11
SOX6-216ENST00000533658 NMRK2Q9NPI5 230 aa8.11□□□□□ -1.11
SOX6-216ENST00000533658 KIAA1551Q9HCM1 1747 aa8.11□□□□□ -1.11
SOX6-216ENST00000533658 KIF7Q2M1P5 1343 aa8.1□□□□□ -1.11
SOX6-216ENST00000533658 POM121CA8CG34 1229 aa8.1□□□□□ -1.11
SOX6-216ENST00000533658 MMP10P09238 476 aa8.1□□□□□ -1.11
SOX6-216ENST00000533658 HMOX1P09601 288 aa8.1□□□□□ -1.11
SOX6-216ENST00000533658 HMGB2P26583 209 aaKnown RBP8.1□□□□□ -1.11
SOX6-216ENST00000533658 GTF2IP78347 998 aa8.1□□□□□ -1.11
SOX6-216ENST00000533658 CC2D1BQ5T0F9 858 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms