RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 PCDHGC5Q9Y5F6 944 aa4.68□□□□□ -1.66
ATM-220ENST00000533526 SNCAIPQ9Y6H5 919 aa4.68□□□□□ -1.66
ATM-220ENST00000533526 FANCGO15287 622 aa4.67□□□□□ -1.66
ATM-220ENST00000533526 NFICP08651 508 aa4.67□□□□□ -1.66
ATM-220ENST00000533526 VAMP1P23763 118 aa4.67□□□□□ -1.66
ATM-220ENST00000533526 HDXQ7Z353 690 aa4.67□□□□□ -1.66
ATM-220ENST00000533526 CCDC84Q86UT8 332 aaPredicted RBP4.67□□□□□ -1.66
ATM-220ENST00000533526 SMYD4Q8IYR2 804 aaPredicted RBP4.67□□□□□ -1.66
ATM-220ENST00000533526 TMEM87AQ8NBN3 555 aa4.67□□□□□ -1.66
ATM-220ENST00000533526 RNF214Q8ND24 703 aa4.67□□□□□ -1.66
ATM-220ENST00000533526 DBNDD2Q9BQY9 259 aa4.67□□□□□ -1.66
ATM-220ENST00000533526 MIR1-1HGQ9H1L0 117 aa4.67□□□□□ -1.66
ATM-220ENST00000533526 DISC1Q9NRI5 854 aa4.67□□□□□ -1.66
ATM-220ENST00000533526 PCOLCE2Q9UKZ9 415 aa4.67□□□□□ -1.66
ATM-220ENST00000533526 RNGTTO60942 597 aaKnown RBP4.66□□□□□ -1.66
ATM-220ENST00000533526 RAB6AP20340 208 aa4.66□□□□□ -1.66
ATM-220ENST00000533526 CYP27A1Q02318 531 aa4.66□□□□□ -1.66
ATM-220ENST00000533526 LMNB2Q03252 620 aa4.66□□□□□ -1.66
ATM-220ENST00000533526 TTLL4Q14679 1199 aa4.66□□□□□ -1.66
ATM-220ENST00000533526 MAP3K11Q16584 847 aa4.66□□□□□ -1.66
ATM-220ENST00000533526 CPSF6Q16630 551 aaKnown RBP eCLIP4.66□□□□□ -1.66
ATM-220ENST00000533526 TSNAXIP1Q2TAA8 658 aa4.66□□□□□ -1.66
ATM-220ENST00000533526 RASIP1Q5U651 963 aa4.66□□□□□ -1.66
ATM-220ENST00000533526 MPRIPQ6WCQ1 1025 aa4.66□□□□□ -1.66
ATM-220ENST00000533526 KCT2Q8NC54 265 aa4.66□□□□□ -1.66
ATM-220ENST00000533526 ELMO3Q96BJ8 720 aa4.66□□□□□ -1.66
ATM-220ENST00000533526 SEMA6CQ9H3T2 930 aa4.66□□□□□ -1.66
ATM-220ENST00000533526 SSU72Q9NP77 194 aaKnown RBP4.66□□□□□ -1.66
ATM-220ENST00000533526 PICK1Q9NRD5 415 aa4.66□□□□□ -1.66
ATM-220ENST00000533526 RNF112Q9ULX5 631 aa4.66□□□□□ -1.66
ATM-220ENST00000533526 TACC3Q9Y6A5 838 aa4.66□□□□□ -1.66
ATM-220ENST00000533526 GBP2P32456 591 aaPredicted RBP4.65□□□□□ -1.67
ATM-220ENST00000533526 RING1Q06587 406 aa4.65□□□□□ -1.67
ATM-220ENST00000533526 CDC37L1Q7L3B6 337 aa4.65□□□□□ -1.67
ATM-220ENST00000533526 HS2ST1Q7LGA3 356 aa4.65□□□□□ -1.67
ATM-220ENST00000533526 C12orf40Q86WS4 652 aa4.65□□□□□ -1.67
ATM-220ENST00000533526 PHC3Q8NDX5 983 aa4.65□□□□□ -1.67
ATM-220ENST00000533526 ZNF507Q8TCN5 953 aa4.65□□□□□ -1.67
ATM-220ENST00000533526 TMEM74Q96NL1 305 aa4.65□□□□□ -1.67
ATM-220ENST00000533526 METTL22Q9BUU2 404 aaPredicted RBP4.65□□□□□ -1.67
ATM-220ENST00000533526 BACH2Q9BYV9 841 aa4.65□□□□□ -1.67
ATM-220ENST00000533526 METTL5Q9NRN9 209 aaKnown RBP4.65□□□□□ -1.67
ATM-220ENST00000533526 ATG3Q9NT62 314 aa4.65□□□□□ -1.67
ATM-220ENST00000533526 PRKAG2Q9UGJ0 569 aa4.65□□□□□ -1.67
ATM-220ENST00000533526 DAGLAQ9Y4D2 1042 aa4.65□□□□□ -1.67
ATM-220ENST00000533526 PCDHB5Q9Y5E4 795 aa4.65□□□□□ -1.67
ATM-220ENST00000533526 DCDC2CA8MYV0 355 aa4.64□□□□□ -1.67
ATM-220ENST00000533526 HCLS1P14317 486 aaPredicted RBP4.64□□□□□ -1.67
ATM-220ENST00000533526 TFE3P19532 575 aaPredicted RBP4.64□□□□□ -1.67
ATM-220ENST00000533526 ITGB7P26010 798 aa4.64□□□□□ -1.67
ATM-220ENST00000533526 GRIK1P39086 918 aa4.64□□□□□ -1.67
ATM-220ENST00000533526 CAMK2GQ13555 558 aaPredicted RBP4.64□□□□□ -1.67
ATM-220ENST00000533526 PPM1JQ5JR12 505 aa4.64□□□□□ -1.67
ATM-220ENST00000533526 DUSP27Q5VZP5 1158 aa4.64□□□□□ -1.67
ATM-220ENST00000533526 INTS5Q6P9B9 1019 aaKnown RBP4.64□□□□□ -1.67
ATM-220ENST00000533526 SEZ6L2Q6UXD5 910 aa4.64□□□□□ -1.67
ATM-220ENST00000533526 CYFIP1Q7L576 1253 aa4.64□□□□□ -1.67
ATM-220ENST00000533526 ZAR1Q86SH2 424 aa4.64□□□□□ -1.67
ATM-220ENST00000533526 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.64□□□□□ -1.67
ATM-220ENST00000533526 SHKBP1Q8TBC3 707 aa4.64□□□□□ -1.67
ATM-220ENST00000533526 JARID2Q92833 1246 aaPredicted RBP4.64□□□□□ -1.67
ATM-220ENST00000533526 GAL3ST3Q96A11 431 aa4.64□□□□□ -1.67
ATM-220ENST00000533526 MFSD14AQ96MC6 490 aa4.64□□□□□ -1.67
ATM-220ENST00000533526 TBC1D32Q96NH3 1257 aa4.64□□□□□ -1.67
ATM-220ENST00000533526 TLR6Q9Y2C9 796 aa4.64□□□□□ -1.67
ATM-220ENST00000533526 CSADQ9Y600 493 aa4.64□□□□□ -1.67
ATM-220ENST00000533526 WDR64B1ANS9 1081 aa4.63□□□□□ -1.67
ATM-220ENST00000533526 PF4P02776 101 aa4.63□□□□□ -1.67
ATM-220ENST00000533526 RPL6Q02878 288 aaKnown RBP4.63□□□□□ -1.67
ATM-220ENST00000533526 PTPN11Q06124 597 aaPredicted RBP4.63□□□□□ -1.67
ATM-220ENST00000533526 INPP5AQ14642 412 aa4.63□□□□□ -1.67
ATM-220ENST00000533526 CYP27C1Q4G0S4 372 aa4.63□□□□□ -1.67
ATM-220ENST00000533526 ZMYM1Q5SVZ6 1142 aa4.63□□□□□ -1.67
ATM-220ENST00000533526 ZBTB37Q5TC79 503 aa4.63□□□□□ -1.67
ATM-220ENST00000533526 LRFN4Q6PJG9 635 aa4.63□□□□□ -1.67
ATM-220ENST00000533526 OGFOD3Q6PK18 319 aa4.63□□□□□ -1.67
ATM-220ENST00000533526 ERMP1Q7Z2K6 904 aa4.63□□□□□ -1.67
ATM-220ENST00000533526 ZDHHC13Q8IUH4 622 aa4.63□□□□□ -1.67
ATM-220ENST00000533526 FBXL6Q8N531 539 aa4.63□□□□□ -1.67
ATM-220ENST00000533526 ISL2Q96A47 359 aa4.63□□□□□ -1.67
ATM-220ENST00000533526 MRRFQ96E11 262 aaKnown RBP4.63□□□□□ -1.67
ATM-220ENST00000533526 PLPPR2Q96GM1 343 aa4.63□□□□□ -1.67
ATM-220ENST00000533526 OSBPL1AQ9BXW6 950 aa4.63□□□□□ -1.67
ATM-220ENST00000533526 WNT10AQ9GZT5 417 aa4.63□□□□□ -1.67
ATM-220ENST00000533526 C1GALT1Q9NS00 363 aa4.63□□□□□ -1.67
ATM-220ENST00000533526 GGT7Q9UJ14 662 aa4.63□□□□□ -1.67
ATM-220ENST00000533526 ROBO2Q9HCK4 1378 aa4.63□□□□□ -1.67
ATM-220ENST00000533526 MINDY4BA8MYZ0 360 aa4.62□□□□□ -1.67
ATM-220ENST00000533526 GFRA2O00451 464 aa4.62□□□□□ -1.67
ATM-220ENST00000533526 SCAMP3O14828 347 aaKnown RBP4.62□□□□□ -1.67
ATM-220ENST00000533526 COBLO75128 1261 aa4.62□□□□□ -1.67
ATM-220ENST00000533526 BPNT1O95861 308 aa4.62□□□□□ -1.67
ATM-220ENST00000533526 F13BP05160 661 aa4.62□□□□□ -1.67
ATM-220ENST00000533526 ZNF76P36508 570 aa4.62□□□□□ -1.67
ATM-220ENST00000533526 PDE4BQ07343 736 aa4.62□□□□□ -1.67
ATM-220ENST00000533526 SEPT6Q14141 434 aa4.62□□□□□ -1.67
ATM-220ENST00000533526 WIPI1Q5MNZ9 446 aaPredicted RBP4.62□□□□□ -1.67
ATM-220ENST00000533526 GATAD2BQ8WXI9 593 aa4.62□□□□□ -1.67
ATM-220ENST00000533526 RNF34Q969K3 372 aa4.62□□□□□ -1.67
ATM-220ENST00000533526 RHOVQ96L33 236 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms