RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 DDX4Q9NQI0 724 aaKnown RBP20.94■□□□□ 0.94
NXF1-216ENST00000533499 FAM198AQ9UFP1 575 aa20.94■□□□□ 0.94
NXF1-216ENST00000533499 TRAF5O00463 557 aa20.93■□□□□ 0.94
NXF1-216ENST00000533499 ZFPM1Q8IX07 1006 aa20.93■□□□□ 0.94
NXF1-216ENST00000533499 MFAP1P55081 439 aaKnown RBP20.92■□□□□ 0.94
NXF1-216ENST00000533499 FKBP1CQ5VVH2 108 aa20.92■□□□□ 0.94
NXF1-216ENST00000533499 ZNF589Q86UQ0 364 aaPredicted RBP20.92■□□□□ 0.94
NXF1-216ENST00000533499 RBM46Q8TBY0 533 aaKnown RBP20.92■□□□□ 0.94
NXF1-216ENST00000533499 IDI2Q9BXS1 227 aa20.92■□□□□ 0.94
NXF1-216ENST00000533499 CCDC171Q6TFL3 1326 aa20.92■□□□□ 0.94
NXF1-216ENST00000533499 CDK5RAP2Q96SN8 1893 aa20.92■□□□□ 0.94
NXF1-216ENST00000533499 ENTPD3O75355 529 aa20.91■□□□□ 0.94
NXF1-216ENST00000533499 FLT1P17948 1338 aa20.91■□□□□ 0.94
NXF1-216ENST00000533499 GNAT2P19087 354 aa20.91■□□□□ 0.94
NXF1-216ENST00000533499 TDO2P48775 406 aa20.91■□□□□ 0.94
NXF1-216ENST00000533499 CNTNAP1P78357 1384 aa20.91■□□□□ 0.94
NXF1-216ENST00000533499 FMR1Q06787 632 aaKnown RBP eCLIP20.91■□□□□ 0.94
NXF1-216ENST00000533499 FAM151AQ8WW52 585 aa20.91■□□□□ 0.94
NXF1-216ENST00000533499 CDCA5Q96FF9 252 aa20.91■□□□□ 0.94
NXF1-216ENST00000533499 MCM9Q9NXL9 1143 aa20.91■□□□□ 0.94
NXF1-216ENST00000533499 POLR3DP05423 398 aaPredicted RBP20.9■□□□□ 0.94
NXF1-216ENST00000533499 PRKG1Q13976 671 aa20.9■□□□□ 0.94
NXF1-216ENST00000533499 FAM83AQ86UY5 434 aa20.9■□□□□ 0.94
NXF1-216ENST00000533499 NACAP1Q9BZK3 213 aa20.9■□□□□ 0.94
NXF1-216ENST00000533499 OSBPL5Q9H0X9 879 aaPredicted RBP20.9■□□□□ 0.94
NXF1-216ENST00000533499 PALD1Q9ULE6 856 aa20.9■□□□□ 0.94
NXF1-216ENST00000533499 NF2P35240 595 aa20.89■□□□□ 0.93
NXF1-216ENST00000533499 TTLL12Q14166 644 aaPredicted RBP20.89■□□□□ 0.93
NXF1-216ENST00000533499 NBPF12Q5TAG4 269 aaPredicted RBP20.89■□□□□ 0.93
NXF1-216ENST00000533499 VPS53Q5VIR6 699 aa20.89■□□□□ 0.93
NXF1-216ENST00000533499 CDAN1Q8IWY9 1227 aa20.89■□□□□ 0.93
NXF1-216ENST00000533499 AMOTL1Q8IY63 956 aa20.89■□□□□ 0.93
NXF1-216ENST00000533499 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.89■□□□□ 0.93
NXF1-216ENST00000533499 PPP2R3BQ9Y5P8 575 aa20.89■□□□□ 0.93
NXF1-216ENST00000533499 MYH1P12882 1939 aa20.88■□□□□ 0.93
NXF1-216ENST00000533499 NAV1Q8NEY1 1877 aa20.88■□□□□ 0.93
NXF1-216ENST00000533499 RAD50Q92878 1312 aa20.88■□□□□ 0.93
NXF1-216ENST00000533499 PATL2C9JE40 543 aaKnown RBP20.88■□□□□ 0.93
NXF1-216ENST00000533499 KIAA1211Q6ZU35 1233 aa20.88■□□□□ 0.93
NXF1-216ENST00000533499 CSRNP1Q96S65 589 aa20.88■□□□□ 0.93
NXF1-216ENST00000533499 ESYT1Q9BSJ8 1104 aa20.88■□□□□ 0.93
NXF1-216ENST00000533499 TRIM34Q9BYJ4 488 aa20.88■□□□□ 0.93
NXF1-216ENST00000533499 DCP1AQ9NPI6 582 aaPredicted RBP20.88■□□□□ 0.93
NXF1-216ENST00000533499 ATP8A2Q9NTI2 1148 aa20.88■□□□□ 0.93
NXF1-216ENST00000533499 BAZ2AQ9UIF9 1905 aaKnown RBP20.88■□□□□ 0.93
NXF1-216ENST00000533499 DDTLA6NHG4 134 aaPredicted RBP20.87■□□□□ 0.93
NXF1-216ENST00000533499 GSG1L2A8MUP6 293 aa20.87■□□□□ 0.93
NXF1-216ENST00000533499 MINDY4BA8MYZ0 360 aa20.87■□□□□ 0.93
NXF1-216ENST00000533499 HLA-DOAP06340 250 aa20.87■□□□□ 0.93
NXF1-216ENST00000533499 SUPT20HL1Q3ZLR7 823 aa20.87■□□□□ 0.93
NXF1-216ENST00000533499 IFNL3Q8IZI9 196 aa20.87■□□□□ 0.93
NXF1-216ENST00000533499 NAPBQ9H115 298 aa20.87■□□□□ 0.93
NXF1-216ENST00000533499 IL25Q9H293 177 aa20.87■□□□□ 0.93
NXF1-216ENST00000533499 FOCADQ5VW36 1801 aa20.86■□□□□ 0.93
NXF1-216ENST00000533499 SGSM2O43147 1006 aa20.86■□□□□ 0.93
NXF1-216ENST00000533499 NPM3O75607 178 aaKnown RBP20.86■□□□□ 0.93
NXF1-216ENST00000533499 CELF2O95319 508 aaKnown RBP20.86■□□□□ 0.93
NXF1-216ENST00000533499 ITGBL1O95965 494 aaPredicted RBP20.86■□□□□ 0.93
NXF1-216ENST00000533499 CYP2D6P10635 497 aa20.86■□□□□ 0.93
NXF1-216ENST00000533499 MIGA2Q7L4E1 593 aa20.86■□□□□ 0.93
NXF1-216ENST00000533499 SH3BP5LQ7L8J4 393 aa20.86■□□□□ 0.93
NXF1-216ENST00000533499 STK11IPQ8N1F8 1099 aa20.86■□□□□ 0.93
NXF1-216ENST00000533499 CRACR2BQ8N4Y2 399 aaPredicted RBP20.86■□□□□ 0.93
NXF1-216ENST00000533499 CYP2D7A0A087X1C5 515 aa20.85■□□□□ 0.93
NXF1-216ENST00000533499 USP17L12C9JPN9 530 aa20.85■□□□□ 0.93
NXF1-216ENST00000533499 USP17L21D6R901 530 aa20.85■□□□□ 0.93
NXF1-216ENST00000533499 HSPD1P10809 573 aaKnown RBP20.85■□□□□ 0.93
NXF1-216ENST00000533499 FSTL1Q12841 308 aa20.85■□□□□ 0.93
NXF1-216ENST00000533499 TTC6Q86TZ1 520 aa20.85■□□□□ 0.93
NXF1-216ENST00000533499 TEPSINQ96N21 525 aa20.85■□□□□ 0.93
NXF1-216ENST00000533499 EPB41L4AQ9HCS5 686 aaPredicted RBP20.85■□□□□ 0.93
NXF1-216ENST00000533499 ANO2Q9NQ90 1003 aa20.85■□□□□ 0.93
NXF1-216ENST00000533499 FZD1Q9UP38 647 aa20.85■□□□□ 0.93
NXF1-216ENST00000533499 HOOK2Q96ED9 719 aa20.84■□□□□ 0.93
NXF1-216ENST00000533499 DHX36Q9H2U1 1008 aaKnown RBP20.84■□□□□ 0.93
NXF1-216ENST00000533499 FAM196BA6NMK8 535 aa20.83■□□□□ 0.93
NXF1-216ENST00000533499 SLURP2P0DP57 97 aa20.83■□□□□ 0.93
NXF1-216ENST00000533499 PTH1RQ03431 593 aa20.82■□□□□ 0.92
NXF1-216ENST00000533499 DCAF15Q66K64 600 aa20.82■□□□□ 0.92
NXF1-216ENST00000533499 GIMAP6Q6P9H5 292 aa20.82■□□□□ 0.92
NXF1-216ENST00000533499 CTR9Q6PD62 1173 aa20.82■□□□□ 0.92
NXF1-216ENST00000533499 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.82■□□□□ 0.92
NXF1-216ENST00000533499 PI4KBQ9UBF8 816 aa20.82■□□□□ 0.92
NXF1-216ENST00000533499 ARPP21Q9UBL0 812 aaPredicted RBP20.82■□□□□ 0.92
NXF1-216ENST00000533499 MKRN1Q9UHC7 482 aaKnown RBP20.82■□□□□ 0.92
NXF1-216ENST00000533499 ANGEL1Q9UNK9 670 aaKnown RBP20.82■□□□□ 0.92
NXF1-216ENST00000533499 RPAP1Q9BWH6 1393 aaPredicted RBP20.82■□□□□ 0.92
NXF1-216ENST00000533499 PPP1R12BO60237 982 aaPredicted RBP20.81■□□□□ 0.92
NXF1-216ENST00000533499 PLCD1P51178 756 aa20.81■□□□□ 0.92
NXF1-216ENST00000533499 HAND2P61296 217 aa20.81■□□□□ 0.92
NXF1-216ENST00000533499 EVX2Q03828 476 aa20.81■□□□□ 0.92
NXF1-216ENST00000533499 ATRNL1Q5VV63 1379 aa20.81■□□□□ 0.92
NXF1-216ENST00000533499 TRPM7Q96QT4 1865 aa20.8■□□□□ 0.92
NXF1-216ENST00000533499 FOXP2O15409 715 aa20.8■□□□□ 0.92
NXF1-216ENST00000533499 FGAP02671 866 aa20.8■□□□□ 0.92
NXF1-216ENST00000533499 MOB2Q70IA6 237 aa20.8■□□□□ 0.92
NXF1-216ENST00000533499 C2orf69Q8N8R5 385 aa20.8■□□□□ 0.92
NXF1-216ENST00000533499 DYNLL2Q96FJ2 89 aa20.8■□□□□ 0.92
NXF1-216ENST00000533499 DSCC1Q9BVC3 393 aa20.8■□□□□ 0.92
NXF1-216ENST00000533499 GBA2Q9HCG7 927 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms