RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 DCTPP1Q9H773 170 aa14.9□□□□□ -0.02
SF3B2-213ENST00000533421 SNRKQ9NRH2 765 aa14.9□□□□□ -0.02
SF3B2-213ENST00000533421 NDUFB9Q9Y6M9 179 aa14.9□□□□□ -0.02
SF3B2-213ENST00000533421 MYO5AQ9Y4I1 1855 aaKnown RBP14.9□□□□□ -0.02
SF3B2-213ENST00000533421 MAST2Q6P0Q8 1798 aa14.9□□□□□ -0.02
SF3B2-213ENST00000533421 CASP8AP2Q9UKL3 1982 aa14.89□□□□□ -0.03
SF3B2-213ENST00000533421 SPDYE5A6NIY4 337 aa14.89□□□□□ -0.03
SF3B2-213ENST00000533421 IFIT2P09913 472 aaKnown RBP14.89□□□□□ -0.03
SF3B2-213ENST00000533421 NFIAQ12857 509 aa14.89□□□□□ -0.03
SF3B2-213ENST00000533421 DGKZQ13574 1117 aa14.89□□□□□ -0.03
SF3B2-213ENST00000533421 TTF1Q15361 905 aaPredicted RBP14.89□□□□□ -0.03
SF3B2-213ENST00000533421 TBC1D9Q6ZT07 1266 aa14.89□□□□□ -0.03
SF3B2-213ENST00000533421 CDAN1Q8IWY9 1227 aa14.89□□□□□ -0.03
SF3B2-213ENST00000533421 FAM198AQ9UFP1 575 aa14.89□□□□□ -0.03
SF3B2-213ENST00000533421 DOCK2Q92608 1830 aa14.88□□□□□ -0.03
SF3B2-213ENST00000533421 CETPP11597 493 aa14.88□□□□□ -0.03
SF3B2-213ENST00000533421 PPATQ06203 517 aa14.88□□□□□ -0.03
SF3B2-213ENST00000533421 SNAPC2Q13487 334 aa14.88□□□□□ -0.03
SF3B2-213ENST00000533421 PICALMQ13492 652 aa14.88□□□□□ -0.03
SF3B2-213ENST00000533421 PKN2Q16513 984 aaKnown RBP14.88□□□□□ -0.03
SF3B2-213ENST00000533421 TSHZ3Q63HK5 1081 aa14.88□□□□□ -0.03
SF3B2-213ENST00000533421 B4GALNT3Q6L9W6 998 aa14.88□□□□□ -0.03
SF3B2-213ENST00000533421 MIGA2Q7L4E1 593 aa14.88□□□□□ -0.03
SF3B2-213ENST00000533421 OTUD5Q96G74 571 aa14.88□□□□□ -0.03
SF3B2-213ENST00000533421 LRRCC1Q9C099 1032 aa14.88□□□□□ -0.03
SF3B2-213ENST00000533421 TESPA1A2RU30 521 aaPredicted RBP14.87□□□□□ -0.03
SF3B2-213ENST00000533421 GPR25O00155 361 aa14.87□□□□□ -0.03
SF3B2-213ENST00000533421 FKTNO75072 461 aa14.87□□□□□ -0.03
SF3B2-213ENST00000533421 TBC1D8O95759 1140 aa14.87□□□□□ -0.03
SF3B2-213ENST00000533421 CYP2E1P05181 493 aaPredicted RBP14.87□□□□□ -0.03
SF3B2-213ENST00000533421 ZAP70P43403 619 aa14.87□□□□□ -0.03
SF3B2-213ENST00000533421 MAP3K12Q12852 859 aa14.87□□□□□ -0.03
SF3B2-213ENST00000533421 PPIL2Q13356 520 aa14.87□□□□□ -0.03
SF3B2-213ENST00000533421 CTU1Q7Z7A3 348 aaKnown RBP14.87□□□□□ -0.03
SF3B2-213ENST00000533421 OTUD7AQ8TE49 926 aaPredicted RBP14.87□□□□□ -0.03
SF3B2-213ENST00000533421 ABHD8Q96I13 439 aa14.87□□□□□ -0.03
SF3B2-213ENST00000533421 ZCCHC17Q9NP64 241 aaKnown RBP14.87□□□□□ -0.03
SF3B2-213ENST00000533421 ZNF112Q9UJU3 913 aa14.87□□□□□ -0.03
SF3B2-213ENST00000533421 SNCAIPQ9Y6H5 919 aa14.87□□□□□ -0.03
SF3B2-213ENST00000533421 COL2A1P02458 1487 aaPredicted RBP14.87□□□□□ -0.03
SF3B2-213ENST00000533421 RFX7Q2KHR2 1363 aa14.86□□□□□ -0.03
SF3B2-213ENST00000533421 CCL15-CCL14A0A0B4J2E2 113 aa14.86□□□□□ -0.03
SF3B2-213ENST00000533421 IDH1O75874 414 aaKnown RBP14.86□□□□□ -0.03
SF3B2-213ENST00000533421 HDAC1Q13547 482 aaPredicted RBP14.86□□□□□ -0.03
SF3B2-213ENST00000533421 ARHGEF6Q15052 776 aa14.86□□□□□ -0.03
SF3B2-213ENST00000533421 CCL15Q16663 113 aa14.86□□□□□ -0.03
SF3B2-213ENST00000533421 NOL9Q5SY16 702 aaKnown RBP14.86□□□□□ -0.03
SF3B2-213ENST00000533421 TEX11Q8IYF3 940 aa14.86□□□□□ -0.03
SF3B2-213ENST00000533421 ZKSCAN4Q969J2 545 aaPredicted RBP14.86□□□□□ -0.03
SF3B2-213ENST00000533421 MCOLN1Q9GZU1 580 aa14.86□□□□□ -0.03
SF3B2-213ENST00000533421 DHX36Q9H2U1 1008 aaKnown RBP14.86□□□□□ -0.03
SF3B2-213ENST00000533421 PICK1Q9NRD5 415 aa14.86□□□□□ -0.03
SF3B2-213ENST00000533421 ATRNL1Q5VV63 1379 aa14.85□□□□□ -0.03
SF3B2-213ENST00000533421 GJA5P36382 358 aa14.85□□□□□ -0.03
SF3B2-213ENST00000533421 RHBDL3P58872 404 aa14.85□□□□□ -0.03
SF3B2-213ENST00000533421 ANKRD45Q5TZF3 282 aa14.85□□□□□ -0.03
SF3B2-213ENST00000533421 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.85□□□□□ -0.03
SF3B2-213ENST00000533421 ZNF296Q8WUU4 475 aaPredicted RBP14.85□□□□□ -0.03
SF3B2-213ENST00000533421 MS4A4AQ96JQ5 239 aa14.85□□□□□ -0.03
SF3B2-213ENST00000533421 IGF2BP3O00425 579 aaKnown RBP eCLIP14.84□□□□□ -0.03
SF3B2-213ENST00000533421 TBC1D12O60347 775 aa14.84□□□□□ -0.03
SF3B2-213ENST00000533421 INPP5BP32019 993 aa14.84□□□□□ -0.03
SF3B2-213ENST00000533421 PPP4CP60510 307 aa14.84□□□□□ -0.03
SF3B2-213ENST00000533421 ERO1AQ96HE7 468 aa14.84□□□□□ -0.03
SF3B2-213ENST00000533421 TRIM34Q9BYJ4 488 aa14.84□□□□□ -0.03
SF3B2-213ENST00000533421 OSBPL5Q9H0X9 879 aaPredicted RBP14.84□□□□□ -0.03
SF3B2-213ENST00000533421 RWDD1Q9H446 243 aaPredicted RBP14.84□□□□□ -0.03
SF3B2-213ENST00000533421 ZFYVE28Q9HCC9 887 aa14.84□□□□□ -0.03
SF3B2-213ENST00000533421 AATFQ9NY61 560 aaKnown RBP eCLIP14.84□□□□□ -0.03
SF3B2-213ENST00000533421 HERC5Q9UII4 1024 aaKnown RBP14.84□□□□□ -0.03
SF3B2-213ENST00000533421 IRF6O14896 467 aa14.83□□□□□ -0.04
SF3B2-213ENST00000533421 CTNND1O60716 968 aaKnown RBP14.83□□□□□ -0.04
SF3B2-213ENST00000533421 CYP7A1P22680 504 aa14.83□□□□□ -0.04
SF3B2-213ENST00000533421 MAP3K10Q02779 954 aa14.83□□□□□ -0.04
SF3B2-213ENST00000533421 TAF1CQ15572 869 aaPredicted RBP14.83□□□□□ -0.04
SF3B2-213ENST00000533421 SCYL3Q8IZE3 742 aa14.83□□□□□ -0.04
SF3B2-213ENST00000533421 ZNF384Q8TF68 577 aa14.83□□□□□ -0.04
SF3B2-213ENST00000533421 EDC3Q96F86 508 aaKnown RBP14.83□□□□□ -0.04
SF3B2-213ENST00000533421 GPATCH3Q96I76 525 aa14.83□□□□□ -0.04
SF3B2-213ENST00000533421 TBC1D2Q9BYX2 928 aa14.83□□□□□ -0.04
SF3B2-213ENST00000533421 LNPKQ9C0E8 428 aa14.83□□□□□ -0.04
SF3B2-213ENST00000533421 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.83□□□□□ -0.04
SF3B2-213ENST00000533421 DDX4Q9NQI0 724 aaKnown RBP14.83□□□□□ -0.04
SF3B2-213ENST00000533421 DDTLA6NHG4 134 aaPredicted RBP14.82□□□□□ -0.04
SF3B2-213ENST00000533421 HLA-DOAP06340 250 aa14.82□□□□□ -0.04
SF3B2-213ENST00000533421 AAMPQ13685 434 aa14.82□□□□□ -0.04
SF3B2-213ENST00000533421 ZFPM1Q8IX07 1006 aa14.82□□□□□ -0.04
SF3B2-213ENST00000533421 SH3RF3Q8TEJ3 882 aaPredicted RBP14.82□□□□□ -0.04
SF3B2-213ENST00000533421 CNKSR2Q8WXI2 1034 aa14.82□□□□□ -0.04
SF3B2-213ENST00000533421 BRI3BPQ8WY22 251 aa14.82□□□□□ -0.04
SF3B2-213ENST00000533421 ANTXR1Q9H6X2 564 aa14.82□□□□□ -0.04
SF3B2-213ENST00000533421 PIH1D3Q9NQM4 214 aaKnown RBP14.82□□□□□ -0.04
SF3B2-213ENST00000533421 PI4KBQ9UBF8 816 aa14.82□□□□□ -0.04
SF3B2-213ENST00000533421 CCDC85CA6NKD9 419 aa14.81□□□□□ -0.04
SF3B2-213ENST00000533421 CXCL11O14625 94 aa14.81□□□□□ -0.04
SF3B2-213ENST00000533421 NEFLP07196 543 aa14.81□□□□□ -0.04
SF3B2-213ENST00000533421 CRHR2Q13324 411 aa14.81□□□□□ -0.04
SF3B2-213ENST00000533421 FASTKD5Q7L8L6 764 aaKnown RBP14.81□□□□□ -0.04
SF3B2-213ENST00000533421 MAGEB6Q8N7X4 407 aa14.81□□□□□ -0.04
SF3B2-213ENST00000533421 DNAJC2Q99543 621 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms