RNA–Protein interactions for RNA: ENST00000533415.5

CDC27-210, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 2,570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-210ENST00000533415 GNAT2P19087 354 aa15.9■□□□□ 0.14
CDC27-210ENST00000533415 GUCY1B3Q02153 619 aa15.9■□□□□ 0.14
CDC27-210ENST00000533415 ALX1Q15699 326 aa15.9■□□□□ 0.14
CDC27-210ENST00000533415 MCTP1Q6DN14 999 aa15.9■□□□□ 0.14
CDC27-210ENST00000533415 MICU3Q86XE3 530 aa15.9■□□□□ 0.14
CDC27-210ENST00000533415 TICAM2Q86XR7 235 aa15.9■□□□□ 0.14
CDC27-210ENST00000533415 GTF3C6Q969F1 213 aa15.9■□□□□ 0.14
CDC27-210ENST00000533415 GZF1Q9H116 711 aaPredicted RBP15.9■□□□□ 0.14
CDC27-210ENST00000533415 ZBTB12Q9Y330 459 aaPredicted RBP15.9■□□□□ 0.14
CDC27-210ENST00000533415 PDS5AQ29RF7 1337 aaKnown RBP15.89■□□□□ 0.14
CDC27-210ENST00000533415 SALL1Q9NSC2 1324 aa15.89■□□□□ 0.14
CDC27-210ENST00000533415 CCDC82Q8N4S0 544 aa15.89■□□□□ 0.13
CDC27-210ENST00000533415 MTFR1LQ9H019 292 aa15.89■□□□□ 0.13
CDC27-210ENST00000533415 COL4A5P29400 1685 aa15.89■□□□□ 0.13
CDC27-210ENST00000533415 TMEM67Q5HYA8 995 aa15.89■□□□□ 0.13
CDC27-210ENST00000533415 TEX11Q8IYF3 940 aa15.89■□□□□ 0.13
CDC27-210ENST00000533415 HPS5Q9UPZ3 1129 aa15.89■□□□□ 0.13
CDC27-210ENST00000533415 MTMR7Q9Y216 660 aa15.89■□□□□ 0.13
CDC27-210ENST00000533415 IFIT3O14879 490 aaKnown RBP15.88■□□□□ 0.13
CDC27-210ENST00000533415 POLD1P28340 1107 aa15.88■□□□□ 0.13
CDC27-210ENST00000533415 RBM5P52756 815 aaKnown RBP eCLIP15.88■□□□□ 0.13
CDC27-210ENST00000533415 ANKRD1Q15327 319 aa15.88■□□□□ 0.13
CDC27-210ENST00000533415 OTUD7BQ6GQQ9 843 aa15.88■□□□□ 0.13
CDC27-210ENST00000533415 NFXL1Q6ZNB6 911 aa15.88■□□□□ 0.13
CDC27-210ENST00000533415 INTS4Q96HW7 963 aaKnown RBP15.88■□□□□ 0.13
CDC27-210ENST00000533415 ZSCAN31Q96LW9 406 aaPredicted RBP15.88■□□□□ 0.13
CDC27-210ENST00000533415 SH2B1Q9NRF2 756 aaPredicted RBP15.88■□□□□ 0.13
CDC27-210ENST00000533415 BCS1LQ9Y276 419 aa15.88■□□□□ 0.13
CDC27-210ENST00000533415 BAG4O95429 457 aaKnown RBP15.88■□□□□ 0.13
CDC27-210ENST00000533415 HMGB1P09429 215 aaKnown RBP15.88■□□□□ 0.13
CDC27-210ENST00000533415 ADD1P35611 737 aaKnown RBP15.88■□□□□ 0.13
CDC27-210ENST00000533415 CCDC125Q86Z20 511 aa15.88■□□□□ 0.13
CDC27-210ENST00000533415 SLC16A10Q8TF71 515 aa15.88■□□□□ 0.13
CDC27-210ENST00000533415 EYA3Q99504 573 aa15.88■□□□□ 0.13
CDC27-210ENST00000533415 CWC22Q9HCG8 908 aaKnown RBP15.88■□□□□ 0.13
CDC27-210ENST00000533415 DDX4Q9NQI0 724 aaKnown RBP15.88■□□□□ 0.13
CDC27-210ENST00000533415 CIZ1Q9ULV3 898 aaPredicted RBP15.88■□□□□ 0.13
CDC27-210ENST00000533415 CCDC88AQ3V6T2 1871 aa15.88■□□□□ 0.13
CDC27-210ENST00000533415 QSER1Q2KHR3 1735 aa15.88■□□□□ 0.13
CDC27-210ENST00000533415 FAM205AQ6ZU69 1335 aa15.88■□□□□ 0.13
CDC27-210ENST00000533415 SH2B2O14492 632 aaPredicted RBP15.87■□□□□ 0.13
CDC27-210ENST00000533415 RHBDL3P58872 404 aa15.87■□□□□ 0.13
CDC27-210ENST00000533415 CDC37L1Q7L3B6 337 aa15.87■□□□□ 0.13
CDC27-210ENST00000533415 ZFPM1Q8IX07 1006 aa15.87■□□□□ 0.13
CDC27-210ENST00000533415 IGDCC4Q8TDY8 1250 aa15.87■□□□□ 0.13
CDC27-210ENST00000533415 SHTN1A0MZ66 631 aa15.87■□□□□ 0.13
CDC27-210ENST00000533415 NFIAQ12857 509 aa15.87■□□□□ 0.13
CDC27-210ENST00000533415 STAG1Q8WVM7 1258 aa15.87■□□□□ 0.13
CDC27-210ENST00000533415 AIFM3Q96NN9 605 aa15.87■□□□□ 0.13
CDC27-210ENST00000533415 LY9Q9HBG7 655 aa15.87■□□□□ 0.13
CDC27-210ENST00000533415 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.87■□□□□ 0.13
CDC27-210ENST00000533415 BRD1O95696 1058 aa15.86■□□□□ 0.13
CDC27-210ENST00000533415 PTGER2P43116 358 aa15.86■□□□□ 0.13
CDC27-210ENST00000533415 TCP10Q12799 353 aa15.86■□□□□ 0.13
CDC27-210ENST00000533415 LARGE2Q8N3Y3 721 aa15.86■□□□□ 0.13
CDC27-210ENST00000533415 SNED1Q8TER0 1413 aa15.86■□□□□ 0.13
CDC27-210ENST00000533415 PTPDC1A2A3K4 754 aa15.86■□□□□ 0.13
CDC27-210ENST00000533415 FAM196BA6NMK8 535 aa15.86■□□□□ 0.13
CDC27-210ENST00000533415 CDC27P30260 824 aa15.86■□□□□ 0.13
CDC27-210ENST00000533415 RASSF7Q02833 373 aa15.86■□□□□ 0.13
CDC27-210ENST00000533415 DACT2Q5SW24 774 aa15.86■□□□□ 0.13
CDC27-210ENST00000533415 RASGRP2Q7LDG7 609 aa15.86■□□□□ 0.13
CDC27-210ENST00000533415 PHKBQ93100 1093 aa15.86■□□□□ 0.13
CDC27-210ENST00000533415 STX6O43752 255 aa15.85■□□□□ 0.13
CDC27-210ENST00000533415 PFKFB2O60825 505 aa15.85■□□□□ 0.13
CDC27-210ENST00000533415 LARP1BQ659C4 914 aaKnown RBP15.85■□□□□ 0.13
CDC27-210ENST00000533415 NSUN7Q8NE18 718 aaKnown RBP15.85■□□□□ 0.13
CDC27-210ENST00000533415 NUP133Q8WUM0 1156 aa15.85■□□□□ 0.13
CDC27-210ENST00000533415 NOL10Q9BSC4 688 aaKnown RBP15.85■□□□□ 0.13
CDC27-210ENST00000533415 AGXT2Q9BYV1 514 aa15.85■□□□□ 0.13
CDC27-210ENST00000533415 ALDH8A1Q9H2A2 487 aaPredicted RBP15.85■□□□□ 0.13
CDC27-210ENST00000533415 MKRN1Q9UHC7 482 aaKnown RBP15.85■□□□□ 0.13
CDC27-210ENST00000533415 ANGEL1Q9UNK9 670 aaKnown RBP15.85■□□□□ 0.13
CDC27-210ENST00000533415 GPR75-ASB3A0A0A6YYF3 556 aa15.85■□□□□ 0.13
CDC27-210ENST00000533415 hCG_1642624A0A1W2PR95 340 aa15.85■□□□□ 0.13
CDC27-210ENST00000533415 BAG3O95817 575 aa15.85■□□□□ 0.13
CDC27-210ENST00000533415 POLR3DP05423 398 aaPredicted RBP15.85■□□□□ 0.13
CDC27-210ENST00000533415 GSTO1P78417 241 aa15.85■□□□□ 0.13
CDC27-210ENST00000533415 NUCB2P80303 420 aa15.85■□□□□ 0.13
CDC27-210ENST00000533415 KIAA2012Q0VF49 1180 aa15.85■□□□□ 0.13
CDC27-210ENST00000533415 CCDC93Q567U6 631 aa15.85■□□□□ 0.13
CDC27-210ENST00000533415 ILDR2Q71H61 639 aa15.85■□□□□ 0.13
CDC27-210ENST00000533415 USP40Q9NVE5 1235 aa15.85■□□□□ 0.13
CDC27-210ENST00000533415 PIM2Q9P1W9 311 aa15.85■□□□□ 0.13
CDC27-210ENST00000533415 FLT1P17948 1338 aa15.85■□□□□ 0.13
CDC27-210ENST00000533415 USP17L3A6NCW0 530 aa15.84■□□□□ 0.13
CDC27-210ENST00000533415 USP17L4A6NCW7 530 aa15.84■□□□□ 0.13
CDC27-210ENST00000533415 USP17L1Q7RTZ2 530 aa15.84■□□□□ 0.13
CDC27-210ENST00000533415 CLEC10AQ8IUN9 316 aa15.84■□□□□ 0.13
CDC27-210ENST00000533415 SGIP1Q9BQI5 828 aa15.84■□□□□ 0.13
CDC27-210ENST00000533415 MTMR6Q9Y217 621 aa15.84■□□□□ 0.13
CDC27-210ENST00000533415 SHROOM1Q2M3G4 852 aaPredicted RBP15.84■□□□□ 0.13
CDC27-210ENST00000533415 TBC1D22AQ8WUA7 517 aa15.84■□□□□ 0.13
CDC27-210ENST00000533415 TNKSO95271 1327 aa15.84■□□□□ 0.13
CDC27-210ENST00000533415 CRKP46108 304 aa15.83■□□□□ 0.13
CDC27-210ENST00000533415 APOBEC3HQ6NTF7 200 aaKnown RBP15.83■□□□□ 0.13
CDC27-210ENST00000533415 PIBF1Q8WXW3 757 aa15.83■□□□□ 0.13
CDC27-210ENST00000533415 PSMD14O00487 310 aa15.83■□□□□ 0.12
CDC27-210ENST00000533415 FDPSP14324 419 aaKnown RBP15.83■□□□□ 0.12
CDC27-210ENST00000533415 DALRD3Q5D0E6 543 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms