RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 SNX14Q9Y5W7 946 aa16.79■□□□□ 0.28
HIF3A-215ENST00000533145 LAMB1P07942 1786 aa16.79■□□□□ 0.28
HIF3A-215ENST00000533145 SHTN1A0MZ66 631 aa16.78■□□□□ 0.28
HIF3A-215ENST00000533145 ZNF213O14771 459 aa16.78■□□□□ 0.28
HIF3A-215ENST00000533145 ZKSCAN1P17029 563 aaPredicted RBP16.78■□□□□ 0.28
HIF3A-215ENST00000533145 TDO2P48775 406 aa16.78■□□□□ 0.28
HIF3A-215ENST00000533145 SPDYE2Q495Y8 402 aa16.78■□□□□ 0.28
HIF3A-215ENST00000533145 CTR9Q6PD62 1173 aa16.78■□□□□ 0.28
HIF3A-215ENST00000533145 RASEFQ8IZ41 740 aa16.78■□□□□ 0.28
HIF3A-215ENST00000533145 ARPP21Q9UBL0 812 aaPredicted RBP16.78■□□□□ 0.28
HIF3A-215ENST00000533145 ZNF70Q9UC06 446 aaPredicted RBP16.78■□□□□ 0.28
HIF3A-215ENST00000533145 PALD1Q9ULE6 856 aa16.78■□□□□ 0.28
HIF3A-215ENST00000533145 WDR90Q96KV7 1748 aa16.78■□□□□ 0.28
HIF3A-215ENST00000533145 FLT1P17948 1338 aa16.77■□□□□ 0.28
HIF3A-215ENST00000533145 USP17L12C9JPN9 530 aa16.77■□□□□ 0.28
HIF3A-215ENST00000533145 USP17L21D6R901 530 aa16.77■□□□□ 0.28
HIF3A-215ENST00000533145 MYO1BO43795 1136 aa16.77■□□□□ 0.28
HIF3A-215ENST00000533145 ENTPD3O75355 529 aa16.77■□□□□ 0.28
HIF3A-215ENST00000533145 KRT32Q14532 448 aa16.77■□□□□ 0.28
HIF3A-215ENST00000533145 TM6SF1Q9BZW5 370 aa16.77■□□□□ 0.28
HIF3A-215ENST00000533145 DDX4Q9NQI0 724 aaKnown RBP16.77■□□□□ 0.28
HIF3A-215ENST00000533145 COL2A1P02458 1487 aaPredicted RBP16.76■□□□□ 0.27
HIF3A-215ENST00000533145 LMOD1P29536 600 aaPredicted RBP16.76■□□□□ 0.27
HIF3A-215ENST00000533145 EPS15P42566 896 aa16.76■□□□□ 0.27
HIF3A-215ENST00000533145 KIF4BQ2VIQ3 1234 aa16.76■□□□□ 0.27
HIF3A-215ENST00000533145 NBPF9Q3BBW0 867 aa16.76■□□□□ 0.27
HIF3A-215ENST00000533145 C12orf60Q5U649 245 aa16.76■□□□□ 0.27
HIF3A-215ENST00000533145 SAMD7Q7Z3H4 446 aa16.76■□□□□ 0.27
HIF3A-215ENST00000533145 MAPKAPK5Q8IW41 473 aa16.76■□□□□ 0.27
HIF3A-215ENST00000533145 OSBPL5Q9H0X9 879 aaPredicted RBP16.76■□□□□ 0.27
HIF3A-215ENST00000533145 ADARB2Q9NS39 739 aaKnown RBP16.76■□□□□ 0.27
HIF3A-215ENST00000533145 TMOD2Q9NZR1 351 aa16.76■□□□□ 0.27
HIF3A-215ENST00000533145 FAM198AQ9UFP1 575 aa16.76■□□□□ 0.27
HIF3A-215ENST00000533145 EGFRP00533 1210 aa16.75■□□□□ 0.27
HIF3A-215ENST00000533145 FGRP09769 529 aa16.75■□□□□ 0.27
HIF3A-215ENST00000533145 PPARAQ07869 468 aa16.75■□□□□ 0.27
HIF3A-215ENST00000533145 NFIAQ12857 509 aa16.75■□□□□ 0.27
HIF3A-215ENST00000533145 FAM83AQ86UY5 434 aa16.75■□□□□ 0.27
HIF3A-215ENST00000533145 DHX36Q9H2U1 1008 aaKnown RBP16.75■□□□□ 0.27
HIF3A-215ENST00000533145 MCM9Q9NXL9 1143 aa16.75■□□□□ 0.27
HIF3A-215ENST00000533145 TAOK2Q9UL54 1235 aa16.75■□□□□ 0.27
HIF3A-215ENST00000533145 PCP11498 1178 aaKnown RBP16.74■□□□□ 0.27
HIF3A-215ENST00000533145 PSMA5P28066 241 aa16.74■□□□□ 0.27
HIF3A-215ENST00000533145 TBC1D10BQ4KMP7 808 aaPredicted RBP16.74■□□□□ 0.27
HIF3A-215ENST00000533145 RBM26Q5T8P6 1007 aaKnown RBP16.74■□□□□ 0.27
HIF3A-215ENST00000533145 AMOTL1Q8IY63 956 aa16.74■□□□□ 0.27
HIF3A-215ENST00000533145 FAM151AQ8WW52 585 aa16.74■□□□□ 0.27
HIF3A-215ENST00000533145 NBPF3Q9H094 633 aa16.74■□□□□ 0.27
HIF3A-215ENST00000533145 POLR2AP24928 1970 aaKnown RBP16.74■□□□□ 0.27
HIF3A-215ENST00000533145 ATRNL1Q5VV63 1379 aa16.74■□□□□ 0.27
HIF3A-215ENST00000533145 ROBO3Q96MS0 1386 aa16.74■□□□□ 0.27
HIF3A-215ENST00000533145 MINDY4BA8MYZ0 360 aa16.73■□□□□ 0.27
HIF3A-215ENST00000533145 E7EWF7 191 aa16.73■□□□□ 0.27
HIF3A-215ENST00000533145 POLR3DP05423 398 aaPredicted RBP16.73■□□□□ 0.27
HIF3A-215ENST00000533145 NT5C2P49902 561 aa16.73■□□□□ 0.27
HIF3A-215ENST00000533145 HIRAP54198 1017 aaPredicted RBP16.73■□□□□ 0.27
HIF3A-215ENST00000533145 HAND2P61296 217 aa16.73■□□□□ 0.27
HIF3A-215ENST00000533145 PICALMQ13492 652 aa16.73■□□□□ 0.27
HIF3A-215ENST00000533145 RABEP1Q15276 862 aa16.73■□□□□ 0.27
HIF3A-215ENST00000533145 ADCK5Q3MIX3 580 aa16.73■□□□□ 0.27
HIF3A-215ENST00000533145 AKNAD1Q5T1N1 836 aa16.73■□□□□ 0.27
HIF3A-215ENST00000533145 TTC6Q86TZ1 520 aa16.73■□□□□ 0.27
HIF3A-215ENST00000533145 STAG1Q8WVM7 1258 aa16.73■□□□□ 0.27
HIF3A-215ENST00000533145 HACL1Q9UJ83 578 aa16.73■□□□□ 0.27
HIF3A-215ENST00000533145 TAF6LQ9Y6J9 622 aa16.73■□□□□ 0.27
HIF3A-215ENST00000533145 CEP350Q5VT06 3117 aa16.73■□□□□ 0.27
HIF3A-215ENST00000533145 CLRN2A0PK11 232 aa16.72■□□□□ 0.27
HIF3A-215ENST00000533145 IQCA1LA6NCM1 817 aa16.72■□□□□ 0.27
HIF3A-215ENST00000533145 POTECB2RU33 542 aa16.72■□□□□ 0.27
HIF3A-215ENST00000533145 SLC3A2P08195 630 aaKnown RBP16.72■□□□□ 0.27
HIF3A-215ENST00000533145 PLCD1P51178 756 aa16.72■□□□□ 0.27
HIF3A-215ENST00000533145 TNFAIP1Q13829 316 aa16.72■□□□□ 0.27
HIF3A-215ENST00000533145 STOX1Q6ZVD7 989 aa16.72■□□□□ 0.27
HIF3A-215ENST00000533145 USP50Q70EL3 339 aaPredicted RBP16.72■□□□□ 0.27
HIF3A-215ENST00000533145 METTL16Q86W50 562 aaKnown RBP16.72■□□□□ 0.27
HIF3A-215ENST00000533145 ZFPM1Q8IX07 1006 aa16.72■□□□□ 0.27
HIF3A-215ENST00000533145 TRPM4Q8TD43 1214 aa16.72■□□□□ 0.27
HIF3A-215ENST00000533145 NEK1Q96PY6 1258 aa16.72■□□□□ 0.27
HIF3A-215ENST00000533145 RNF41Q9H4P4 317 aaPredicted RBP16.72■□□□□ 0.27
HIF3A-215ENST00000533145 ZSWIM6Q9HCJ5 1215 aa16.72■□□□□ 0.27
HIF3A-215ENST00000533145 RBM19Q9Y4C8 960 aaKnown RBP16.72■□□□□ 0.27
HIF3A-215ENST00000533145 PITPNM2Q9BZ72 1349 aa16.71■□□□□ 0.27
HIF3A-215ENST00000533145 SIPA1L1O43166 1804 aa16.71■□□□□ 0.27
HIF3A-215ENST00000533145 CYP2D7A0A087X1C5 515 aa16.71■□□□□ 0.27
HIF3A-215ENST00000533145 HMGB1P09429 215 aaKnown RBP16.71■□□□□ 0.27
HIF3A-215ENST00000533145 TNNI2P48788 182 aa16.71■□□□□ 0.27
HIF3A-215ENST00000533145 CACNB3P54284 484 aa16.71■□□□□ 0.27
HIF3A-215ENST00000533145 CTDSPL2Q05D32 466 aa16.71■□□□□ 0.27
HIF3A-215ENST00000533145 GABPAQ06546 454 aa16.71■□□□□ 0.27
HIF3A-215ENST00000533145 MFSD6Q6ZSS7 791 aa16.71■□□□□ 0.27
HIF3A-215ENST00000533145 SH3BP5LQ7L8J4 393 aa16.71■□□□□ 0.27
HIF3A-215ENST00000533145 TBC1D10CQ8IV04 446 aa16.71■□□□□ 0.27
HIF3A-215ENST00000533145 EHD4Q9H223 541 aa16.71■□□□□ 0.27
HIF3A-215ENST00000533145 CNNM2Q9H8M5 875 aa16.71■□□□□ 0.27
HIF3A-215ENST00000533145 PI4KBQ9UBF8 816 aa16.71■□□□□ 0.27
HIF3A-215ENST00000533145 PGAP2Q9UHJ9 254 aa16.71■□□□□ 0.27
HIF3A-215ENST00000533145 SAP30BPQ9UHR5 308 aaKnown RBP16.71■□□□□ 0.27
HIF3A-215ENST00000533145 TACC3Q9Y6A5 838 aa16.71■□□□□ 0.27
HIF3A-215ENST00000533145 CNTNAP1P78357 1384 aa16.71■□□□□ 0.27
HIF3A-215ENST00000533145 TCP10L2B9ZVM9 353 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms