RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 PTH1RQ03431 593 aa6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 KCNMA1Q12791 1236 aa6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 TFCP2Q12800 502 aa6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 MCMDC2Q4G0Z9 681 aa6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 FBXL16Q8N461 479 aa6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 KCTD17Q8N5Z5 321 aa6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 PIGBQ92521 554 aa6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 SYAP1Q96A49 352 aaPredicted RBP6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 ZNF512BQ96KM6 892 aaPredicted RBP6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 CNTNAP3BQ96NU0 1288 aa6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 TSEN34Q9BSV6 310 aaKnown RBP6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 DSCC1Q9BVC3 393 aa6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 CNTNAP3Q9BZ76 1288 aa6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 UPF3BQ9BZI7 483 aaKnown RBP6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 SIL1Q9H173 461 aa6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 BOLA2Q9H3K6 86 aa6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 GRPEL1Q9HAV7 217 aa6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 STRN4Q9NRL3 753 aa6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 BTG4Q9NY30 223 aa6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 TLR7Q9NYK1 1049 aaKnown RBP6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 TCHHQ07283 1943 aa6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 COL5A3P25940 1745 aaPredicted RBP6.81□□□□□ -1.32
ATPAF1-210ENST00000532925 FIGNL2A6NMB9 653 aa6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 TTLL8A6PVC2 850 aa6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 ATP5J2-PTCD1G3V325 749 aa6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 EXOC5O00471 708 aa6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 PTCD1O75127 700 aaKnown RBP6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 TAF5LO75529 589 aa6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 ATRNO75882 1429 aa6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 MAP4K4O95819 1239 aaPredicted RBP6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 CYP19A1P11511 503 aaPredicted RBP6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 PTSQ03393 145 aa6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 CBLBQ13191 982 aa6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 MCTP1Q6DN14 999 aa6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 PRPF40BQ6NWY9 871 aaKnown RBP6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 BLOC1S2Q6QNY1 142 aa6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 DDX60Q8IY21 1712 aaKnown RBP6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 RGS22Q8NE09 1264 aa6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 DDX54Q8TDD1 881 aaKnown RBP6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 JAKMIP1Q96N16 626 aaKnown RBP6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 DBNDD2Q9BQY9 259 aa6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 PDRG1Q9NUG6 133 aa6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 CEP126Q9P2H0 1117 aa6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 SMC3Q9UQE7 1217 aa6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 LAMA4Q16363 1823 aa6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 RTL9Q8NET4 1388 aa6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 AKAP11Q9UKA4 1901 aa6.8□□□□□ -1.32
ATPAF1-210ENST00000532925 SPATA31A1Q5TZJ5 1347 aa6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 RIC1Q4ADV7 1423 aa6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 DOCK2Q92608 1830 aa6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 STX6O43752 255 aa6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 ZSCAN22P10073 491 aaPredicted RBP6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 XRCC6P12956 609 aaKnown RBP eCLIP6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 RPS6KB1P23443 525 aa6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 KCNJ4P48050 445 aa6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 PKP1Q13835 747 aa6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 SUZ12Q15022 739 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 TMEM132AQ24JP5 1023 aa6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 CCDC57Q2TAC2 916 aa6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 TUSC1Q2TAM9 212 aa6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 ERFEQ4G0M1 354 aa6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 ZMYM1Q5SVZ6 1142 aa6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 ILDR2Q71H61 639 aa6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 DNAJC10Q8IXB1 793 aa6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 FAM43AQ8N2R8 423 aa6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 HELBQ8NG08 1087 aaPredicted RBP6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 FAM227BQ96M60 508 aa6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 AGXT2Q9BYV1 514 aa6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 PAG1Q9NWQ8 432 aa6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.79□□□□□ -1.32
ATPAF1-210ENST00000532925 WDR19Q8NEZ3 1342 aa6.78□□□□□ -1.32
ATPAF1-210ENST00000532925 A0A1B0GUL7 405 aa6.78□□□□□ -1.32
ATPAF1-210ENST00000532925 PDE8AO60658 829 aa6.78□□□□□ -1.32
ATPAF1-210ENST00000532925 F13A1P00488 732 aa6.78□□□□□ -1.32
ATPAF1-210ENST00000532925 NCLP19338 710 aaKnown RBP6.78□□□□□ -1.32
ATPAF1-210ENST00000532925 PIP4K2AP48426 406 aaPredicted RBP6.78□□□□□ -1.32
ATPAF1-210ENST00000532925 CTSWP56202 376 aa6.78□□□□□ -1.32
ATPAF1-210ENST00000532925 PDE4DQ08499 809 aa6.78□□□□□ -1.32
ATPAF1-210ENST00000532925 IFIT5Q13325 482 aaKnown RBP6.78□□□□□ -1.32
ATPAF1-210ENST00000532925 PARP10Q53GL7 1025 aa6.78□□□□□ -1.32
ATPAF1-210ENST00000532925 CCDC158Q5M9N0 1113 aa6.78□□□□□ -1.32
ATPAF1-210ENST00000532925 PPP1R26Q5T8A7 1209 aaPredicted RBP6.78□□□□□ -1.32
ATPAF1-210ENST00000532925 ZNF589Q86UQ0 364 aaPredicted RBP6.78□□□□□ -1.32
ATPAF1-210ENST00000532925 NLRP10Q86W26 655 aa6.78□□□□□ -1.32
ATPAF1-210ENST00000532925 KLHDC4Q8TBB5 520 aa6.78□□□□□ -1.32
ATPAF1-210ENST00000532925 SMARCC1Q92922 1105 aaPredicted RBP6.78□□□□□ -1.32
ATPAF1-210ENST00000532925 LLPHQ9BRT6 129 aaKnown RBP6.78□□□□□ -1.32
ATPAF1-210ENST00000532925 ASAP1Q9ULH1 1129 aa6.78□□□□□ -1.32
ATPAF1-210ENST00000532925 CARMIL3Q8ND23 1372 aa6.78□□□□□ -1.32
ATPAF1-210ENST00000532925 KAT6BQ8WYB5 2073 aa6.78□□□□□ -1.32
ATPAF1-210ENST00000532925 SCN7AQ01118 1682 aa6.77□□□□□ -1.32
ATPAF1-210ENST00000532925 ELP1O95163 1332 aa6.77□□□□□ -1.32
ATPAF1-210ENST00000532925 ZMYM6O95789 1325 aa6.77□□□□□ -1.32
ATPAF1-210ENST00000532925 SPATA31A5Q5VU36 1347 aa6.77□□□□□ -1.32
ATPAF1-210ENST00000532925 SPATA31A7Q8IWB4 1347 aa6.77□□□□□ -1.32
ATPAF1-210ENST00000532925 LETM1O95202 739 aaPredicted RBP6.77□□□□□ -1.33
ATPAF1-210ENST00000532925 IFIT1P09914 478 aaKnown RBP6.77□□□□□ -1.33
ATPAF1-210ENST00000532925 SYT1P21579 422 aa6.77□□□□□ -1.33
ATPAF1-210ENST00000532925 CLK2P49760 499 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms