RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 CYP2E1P05181 493 aaPredicted RBP21.92■■□□□ 1.1
SMG1-203ENST00000532700 INHBEP58166 350 aa21.92■■□□□ 1.1
SMG1-203ENST00000532700 PICALMQ13492 652 aa21.92■■□□□ 1.1
SMG1-203ENST00000532700 RCAN3Q9UKA8 241 aa21.92■■□□□ 1.1
SMG1-203ENST00000532700 PTPRFP10586 1907 aa21.92■■□□□ 1.1
SMG1-203ENST00000532700 SPTY2D1Q68D10 685 aaPredicted RBP21.91■■□□□ 1.1
SMG1-203ENST00000532700 PIH1D3Q9NQM4 214 aaKnown RBP21.91■■□□□ 1.1
SMG1-203ENST00000532700 ATAD5Q96QE3 1844 aa21.9■■□□□ 1.1
SMG1-203ENST00000532700 PHF20L1A8MW92 1017 aa21.9■■□□□ 1.1
SMG1-203ENST00000532700 ALDH1A1P00352 501 aa21.9■■□□□ 1.1
SMG1-203ENST00000532700 ZAP70P43403 619 aa21.9■■□□□ 1.1
SMG1-203ENST00000532700 TTC39AQ5SRH9 613 aa21.9■■□□□ 1.1
SMG1-203ENST00000532700 DCAF15Q66K64 600 aa21.9■■□□□ 1.1
SMG1-203ENST00000532700 ERO1BQ86YB8 467 aa21.9■■□□□ 1.1
SMG1-203ENST00000532700 RAI14Q9P0K7 980 aa21.9■■□□□ 1.1
SMG1-203ENST00000532700 HPS5Q9UPZ3 1129 aa21.9■■□□□ 1.1
SMG1-203ENST00000532700 HTTP42858 3142 aa21.89■■□□□ 1.1
SMG1-203ENST00000532700 FAM196BA6NMK8 535 aa21.89■■□□□ 1.09
SMG1-203ENST00000532700 ENTPD3O75355 529 aa21.89■■□□□ 1.09
SMG1-203ENST00000532700 UQCRFS1P1P0C7P4 283 aa21.89■■□□□ 1.09
SMG1-203ENST00000532700 ZBTB40Q9NUA8 1239 aa21.89■■□□□ 1.09
SMG1-203ENST00000532700 GTF2A2P52657 109 aa21.88■■□□□ 1.09
SMG1-203ENST00000532700 SOX10P56693 466 aa21.88■■□□□ 1.09
SMG1-203ENST00000532700 PPIL2Q13356 520 aa21.88■■□□□ 1.09
SMG1-203ENST00000532700 MOGSQ13724 837 aa21.88■■□□□ 1.09
SMG1-203ENST00000532700 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.88■■□□□ 1.09
SMG1-203ENST00000532700 CD99L2Q8TCZ2 262 aa21.88■■□□□ 1.09
SMG1-203ENST00000532700 BTBD19C9JJ37 291 aa21.87■■□□□ 1.09
SMG1-203ENST00000532700 NOL9Q5SY16 702 aaKnown RBP21.87■■□□□ 1.09
SMG1-203ENST00000532700 CCDC84Q86UT8 332 aaPredicted RBP21.87■■□□□ 1.09
SMG1-203ENST00000532700 SH3RF3Q8TEJ3 882 aaPredicted RBP21.87■■□□□ 1.09
SMG1-203ENST00000532700 IL1RAPL2Q9NP60 686 aa21.87■■□□□ 1.09
SMG1-203ENST00000532700 LRP2BPQ9P2M1 347 aa21.87■■□□□ 1.09
SMG1-203ENST00000532700 MAP3K10Q02779 954 aa21.86■■□□□ 1.09
SMG1-203ENST00000532700 RRP1BQ14684 758 aaKnown RBP21.86■■□□□ 1.09
SMG1-203ENST00000532700 OTOP1Q7RTM1 612 aa21.86■■□□□ 1.09
SMG1-203ENST00000532700 HOOK2Q96ED9 719 aa21.86■■□□□ 1.09
SMG1-203ENST00000532700 ANTXR1Q9H6X2 564 aa21.86■■□□□ 1.09
SMG1-203ENST00000532700 APBB1O00213 710 aa21.85■■□□□ 1.09
SMG1-203ENST00000532700 RGS19P49795 217 aa21.85■■□□□ 1.09
SMG1-203ENST00000532700 TAF1CQ15572 869 aaPredicted RBP21.85■■□□□ 1.09
SMG1-203ENST00000532700 CCDC158Q5M9N0 1113 aa21.85■■□□□ 1.09
SMG1-203ENST00000532700 ZSCAN29Q8IWY8 852 aaPredicted RBP21.85■■□□□ 1.09
SMG1-203ENST00000532700 SLF2Q8IX21 1173 aa21.85■■□□□ 1.09
SMG1-203ENST00000532700 ZNF512BQ96KM6 892 aaPredicted RBP21.85■■□□□ 1.09
SMG1-203ENST00000532700 PPATQ06203 517 aa21.84■■□□□ 1.09
SMG1-203ENST00000532700 AACSQ86V21 672 aa21.84■■□□□ 1.09
SMG1-203ENST00000532700 RHPN1Q8TCX5 695 aa21.84■■□□□ 1.09
SMG1-203ENST00000532700 AATFQ9NY61 560 aaKnown RBP eCLIP21.84■■□□□ 1.09
SMG1-203ENST00000532700 KCNH4Q9UQ05 1017 aa21.84■■□□□ 1.09
SMG1-203ENST00000532700 TRIM17Q9Y577 477 aa21.84■■□□□ 1.09
SMG1-203ENST00000532700 COL2A1P02458 1487 aaPredicted RBP21.83■■□□□ 1.09
SMG1-203ENST00000532700 CETPP11597 493 aa21.83■■□□□ 1.09
SMG1-203ENST00000532700 DYNLL1P63167 89 aaKnown RBP21.83■■□□□ 1.09
SMG1-203ENST00000532700 SNAPC2Q13487 334 aa21.83■■□□□ 1.09
SMG1-203ENST00000532700 ARHGAP39Q9C0H5 1083 aa21.83■■□□□ 1.09
SMG1-203ENST00000532700 OSBPL5Q9H0X9 879 aaPredicted RBP21.83■■□□□ 1.09
SMG1-203ENST00000532700 DDX19BQ9UMR2 479 aa21.83■■□□□ 1.09
SMG1-203ENST00000532700 TNRC18O15417 2968 aaPredicted RBP21.82■■□□□ 1.08
SMG1-203ENST00000532700 GSTO1P78417 241 aa21.82■■□□□ 1.08
SMG1-203ENST00000532700 OTUD7BQ6GQQ9 843 aa21.82■■□□□ 1.08
SMG1-203ENST00000532700 NAA16Q6N069 864 aaPredicted RBP21.82■■□□□ 1.08
SMG1-203ENST00000532700 FBXO46Q6PJ61 603 aaPredicted RBP21.82■■□□□ 1.08
SMG1-203ENST00000532700 TEX11Q8IYF3 940 aa21.82■■□□□ 1.08
SMG1-203ENST00000532700 DDX60LQ5H9U9 1706 aaKnown RBP21.82■■□□□ 1.08
SMG1-203ENST00000532700 ADGRA2Q96PE1 1338 aa21.81■■□□□ 1.08
SMG1-203ENST00000532700 LDHCP07864 332 aa21.81■■□□□ 1.08
SMG1-203ENST00000532700 PTPRAP18433 802 aa21.81■■□□□ 1.08
SMG1-203ENST00000532700 SP3Q02447 781 aa21.81■■□□□ 1.08
SMG1-203ENST00000532700 SHROOM1Q2M3G4 852 aaPredicted RBP21.81■■□□□ 1.08
SMG1-203ENST00000532700 GPAT2Q6NUI2 795 aa21.81■■□□□ 1.08
SMG1-203ENST00000532700 SCYL3Q8IZE3 742 aa21.81■■□□□ 1.08
SMG1-203ENST00000532700 MYH1P12882 1939 aa21.8■■□□□ 1.08
SMG1-203ENST00000532700 NPM3O75607 178 aaKnown RBP21.8■■□□□ 1.08
SMG1-203ENST00000532700 ECM2O94769 699 aaPredicted RBP21.8■■□□□ 1.08
SMG1-203ENST00000532700 CTGFP29279 349 aa21.8■■□□□ 1.08
SMG1-203ENST00000532700 JAG1P78504 1218 aa21.8■■□□□ 1.08
SMG1-203ENST00000532700 BCL11AQ9H165 835 aa21.8■■□□□ 1.08
SMG1-203ENST00000532700 LOC285556D6RIA3 1793 aa21.79■■□□□ 1.08
SMG1-203ENST00000532700 MS4A1P11836 297 aa21.79■■□□□ 1.08
SMG1-203ENST00000532700 PKN2Q16513 984 aaKnown RBP21.79■■□□□ 1.08
SMG1-203ENST00000532700 MAPKAPK5Q8IW41 473 aa21.79■■□□□ 1.08
SMG1-203ENST00000532700 RPAP2Q8IXW5 612 aaPredicted RBP21.79■■□□□ 1.08
SMG1-203ENST00000532700 DNAJC18Q9H819 358 aa21.79■■□□□ 1.08
SMG1-203ENST00000532700 ZFYVE28Q9HCC9 887 aa21.79■■□□□ 1.08
SMG1-203ENST00000532700 ZHX2Q9Y6X8 837 aa21.79■■□□□ 1.08
SMG1-203ENST00000532700 IDH1O75874 414 aaKnown RBP21.78■■□□□ 1.08
SMG1-203ENST00000532700 PPP4CP60510 307 aa21.78■■□□□ 1.08
SMG1-203ENST00000532700 SLC4A8Q2Y0W8 1093 aa21.78■■□□□ 1.08
SMG1-203ENST00000532700 ERC1Q8IUD2 1116 aa21.78■■□□□ 1.08
SMG1-203ENST00000532700 MIGA1Q8NAN2 632 aa21.78■■□□□ 1.08
SMG1-203ENST00000532700 TGFBRAP1Q8WUH2 860 aa21.78■■□□□ 1.08
SMG1-203ENST00000532700 EDC3Q96F86 508 aaKnown RBP21.78■■□□□ 1.08
SMG1-203ENST00000532700 ERO1AQ96HE7 468 aa21.78■■□□□ 1.08
SMG1-203ENST00000532700 AFG3L2Q9Y4W6 797 aa21.78■■□□□ 1.08
SMG1-203ENST00000532700 FLT1P17948 1338 aa21.78■■□□□ 1.08
SMG1-203ENST00000532700 PDHXO00330 501 aa21.77■■□□□ 1.08
SMG1-203ENST00000532700 TLR2O60603 784 aa21.77■■□□□ 1.08
SMG1-203ENST00000532700 CYP7A1P22680 504 aa21.77■■□□□ 1.08
SMG1-203ENST00000532700 ANKRD23Q86SG2 305 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms