RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 TAF1CQ15572 869 aaPredicted RBP28.31■■■□□ 2.12
LTBP3-220ENST00000532661 ATRNL1Q5VV63 1379 aa28.31■■■□□ 2.12
LTBP3-220ENST00000532661 DDTLA6NHG4 134 aaPredicted RBP28.3■■■□□ 2.12
LTBP3-220ENST00000532661 PPATQ06203 517 aa28.3■■■□□ 2.12
LTBP3-220ENST00000532661 SNAPC2Q13487 334 aa28.3■■■□□ 2.12
LTBP3-220ENST00000532661 TTC39AQ5SRH9 613 aa28.3■■■□□ 2.12
LTBP3-220ENST00000532661 OTOP1Q7RTM1 612 aa28.3■■■□□ 2.12
LTBP3-220ENST00000532661 ZSCAN29Q8IWY8 852 aaPredicted RBP28.3■■■□□ 2.12
LTBP3-220ENST00000532661 BTBD19C9JJ37 291 aa28.29■■■□□ 2.12
LTBP3-220ENST00000532661 SP3Q02447 781 aa28.29■■■□□ 2.12
LTBP3-220ENST00000532661 ZFYVE28Q9HCC9 887 aa28.29■■■□□ 2.12
LTBP3-220ENST00000532661 GSTO1P78417 241 aa28.28■■■□□ 2.12
LTBP3-220ENST00000532661 CCDC158Q5M9N0 1113 aa28.28■■■□□ 2.12
LTBP3-220ENST00000532661 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.28■■■□□ 2.12
LTBP3-220ENST00000532661 ERO1AQ96HE7 468 aa28.28■■■□□ 2.12
LTBP3-220ENST00000532661 TLR7Q9NYK1 1049 aaKnown RBP28.28■■■□□ 2.12
LTBP3-220ENST00000532661 LRP2BPQ9P2M1 347 aa28.28■■■□□ 2.12
LTBP3-220ENST00000532661 PHF20L1A8MW92 1017 aa28.27■■■□□ 2.12
LTBP3-220ENST00000532661 LDHCP07864 332 aa28.27■■■□□ 2.12
LTBP3-220ENST00000532661 NOL9Q5SY16 702 aaKnown RBP28.27■■■□□ 2.12
LTBP3-220ENST00000532661 CCDC8Q9H0W5 538 aaPredicted RBP28.27■■■□□ 2.12
LTBP3-220ENST00000532661 DBNLQ9UJU6 430 aaKnown RBP28.27■■■□□ 2.12
LTBP3-220ENST00000532661 AK9Q5TCS8 1911 aa28.27■■■□□ 2.12
LTBP3-220ENST00000532661 EAF2Q96CJ1 260 aaPredicted RBP28.26■■■□□ 2.11
LTBP3-220ENST00000532661 CYP2E1P05181 493 aaPredicted RBP28.25■■■□□ 2.11
LTBP3-220ENST00000532661 EXOC6BQ9Y2D4 811 aa28.25■■■□□ 2.11
LTBP3-220ENST00000532661 MAP3K10Q02779 954 aa28.24■■■□□ 2.11
LTBP3-220ENST00000532661 EFCC1Q9HA90 598 aa28.24■■■□□ 2.11
LTBP3-220ENST00000532661 KCNH4Q9UQ05 1017 aa28.24■■■□□ 2.11
LTBP3-220ENST00000532661 HTTP42858 3142 aa28.24■■■□□ 2.11
LTBP3-220ENST00000532661 ZAP70P43403 619 aa28.23■■■□□ 2.11
LTBP3-220ENST00000532661 MOGSQ13724 837 aa28.22■■■□□ 2.11
LTBP3-220ENST00000532661 SCYL3Q8IZE3 742 aa28.22■■■□□ 2.11
LTBP3-220ENST00000532661 ZNF512BQ96KM6 892 aaPredicted RBP28.22■■■□□ 2.11
LTBP3-220ENST00000532661 ZCCHC17Q9NP64 241 aaKnown RBP28.22■■■□□ 2.11
LTBP3-220ENST00000532661 PTPN22Q9Y2R2 807 aa28.22■■■□□ 2.11
LTBP3-220ENST00000532661 COG6Q9Y2V7 657 aa28.22■■■□□ 2.11
LTBP3-220ENST00000532661 FAM196BA6NMK8 535 aa28.21■■■□□ 2.11
LTBP3-220ENST00000532661 TLR2O60603 784 aa28.21■■■□□ 2.11
LTBP3-220ENST00000532661 NPM3O75607 178 aaKnown RBP28.21■■■□□ 2.11
LTBP3-220ENST00000532661 MS4A1P11836 297 aa28.21■■■□□ 2.11
LTBP3-220ENST00000532661 NAA16Q6N069 864 aaPredicted RBP28.21■■■□□ 2.11
LTBP3-220ENST00000532661 SH3RF3Q8TEJ3 882 aaPredicted RBP28.21■■■□□ 2.11
LTBP3-220ENST00000532661 PIH1D3Q9NQM4 214 aaKnown RBP28.21■■■□□ 2.11
LTBP3-220ENST00000532661 ADGRA1Q86SQ6 560 aa28.2■■■□□ 2.1
LTBP3-220ENST00000532661 TEX11Q8IYF3 940 aa28.2■■■□□ 2.1
LTBP3-220ENST00000532661 RCAN3Q9UKA8 241 aa28.2■■■□□ 2.1
LTBP3-220ENST00000532661 ZHX2Q9Y6X8 837 aa28.2■■■□□ 2.1
LTBP3-220ENST00000532661 DOCK2Q92608 1830 aa28.2■■■□□ 2.1
LTBP3-220ENST00000532661 TNRC18O15417 2968 aaPredicted RBP28.19■■■□□ 2.1
LTBP3-220ENST00000532661 MAP4K4O95819 1239 aaPredicted RBP28.19■■■□□ 2.1
LTBP3-220ENST00000532661 PTPRAP18433 802 aa28.19■■■□□ 2.1
LTBP3-220ENST00000532661 ANKRD23Q86SG2 305 aa28.19■■■□□ 2.1
LTBP3-220ENST00000532661 OSBPL5Q9H0X9 879 aaPredicted RBP28.19■■■□□ 2.1
LTBP3-220ENST00000532661 AATFQ9NY61 560 aaKnown RBP eCLIP28.19■■■□□ 2.1
LTBP3-220ENST00000532661 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.19■■■□□ 2.1
LTBP3-220ENST00000532661 PDHXO00330 501 aa28.18■■■□□ 2.1
LTBP3-220ENST00000532661 PICK1Q9NRD5 415 aa28.18■■■□□ 2.1
LTBP3-220ENST00000532661 NDUFB9Q9Y6M9 179 aa28.18■■■□□ 2.1
LTBP3-220ENST00000532661 CXCL11O14625 94 aa28.17■■■□□ 2.1
LTBP3-220ENST00000532661 GPAT2Q6NUI2 795 aa28.17■■■□□ 2.1
LTBP3-220ENST00000532661 CCDC84Q86UT8 332 aaPredicted RBP28.17■■■□□ 2.1
LTBP3-220ENST00000532661 NOL10Q9BSC4 688 aaKnown RBP28.17■■■□□ 2.1
LTBP3-220ENST00000532661 ARHGAP39Q9C0H5 1083 aa28.17■■■□□ 2.1
LTBP3-220ENST00000532661 IL1RAPL2Q9NP60 686 aa28.17■■■□□ 2.1
LTBP3-220ENST00000532661 ZBTB40Q9NUA8 1239 aa28.17■■■□□ 2.1
LTBP3-220ENST00000532661 TBC1D12O60347 775 aa28.16■■■□□ 2.1
LTBP3-220ENST00000532661 CTNND1O60716 968 aaKnown RBP28.16■■■□□ 2.1
LTBP3-220ENST00000532661 AACSQ86V21 672 aa28.16■■■□□ 2.1
LTBP3-220ENST00000532661 ERC1Q8IUD2 1116 aa28.16■■■□□ 2.1
LTBP3-220ENST00000532661 SIRT2Q8IXJ6 389 aa28.16■■■□□ 2.1
LTBP3-220ENST00000532661 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.16■■■□□ 2.1
LTBP3-220ENST00000532661 CPA4Q9UI42 421 aa28.16■■■□□ 2.1
LTBP3-220ENST00000532661 DDX19BQ9UMR2 479 aa28.16■■■□□ 2.1
LTBP3-220ENST00000532661 AFG3L2Q9Y4W6 797 aa28.16■■■□□ 2.1
LTBP3-220ENST00000532661 ECM2O94769 699 aaPredicted RBP28.15■■■□□ 2.1
LTBP3-220ENST00000532661 BAG3O95817 575 aa28.15■■■□□ 2.1
LTBP3-220ENST00000532661 PPP4CP60510 307 aa28.15■■■□□ 2.1
LTBP3-220ENST00000532661 C17orf99Q6UX52 265 aa28.15■■■□□ 2.1
LTBP3-220ENST00000532661 APBB1O00213 710 aa28.14■■■□□ 2.1
LTBP3-220ENST00000532661 RHPN1Q8TCX5 695 aa28.14■■■□□ 2.1
LTBP3-220ENST00000532661 A0A0G2JLL6 359 aaPredicted RBP28.13■■■□□ 2.09
LTBP3-220ENST00000532661 LACTBP83111 547 aaPredicted RBP28.13■■■□□ 2.09
LTBP3-220ENST00000532661 RRP1BQ14684 758 aaKnown RBP28.13■■■□□ 2.09
LTBP3-220ENST00000532661 PRRT2Q7Z6L0 340 aaPredicted RBP28.13■■■□□ 2.09
LTBP3-220ENST00000532661 RPAP2Q8IXW5 612 aaPredicted RBP28.13■■■□□ 2.09
LTBP3-220ENST00000532661 TGFBRAP1Q8WUH2 860 aa28.13■■■□□ 2.09
LTBP3-220ENST00000532661 ANTXR1Q9H6X2 564 aa28.13■■■□□ 2.09
LTBP3-220ENST00000532661 CYP7A1P22680 504 aa28.12■■■□□ 2.09
LTBP3-220ENST00000532661 DYNLL1P63167 89 aaKnown RBP28.12■■■□□ 2.09
LTBP3-220ENST00000532661 HSP90AB4PQ58FF6 505 aa28.12■■■□□ 2.09
LTBP3-220ENST00000532661 C20orf194Q5TEA3 1177 aa28.12■■■□□ 2.09
LTBP3-220ENST00000532661 MAPKAPK5Q8IW41 473 aa28.12■■■□□ 2.09
LTBP3-220ENST00000532661 PTCH2Q9Y6C5 1203 aa28.12■■■□□ 2.09
LTBP3-220ENST00000532661 COL2A1P02458 1487 aaPredicted RBP28.12■■■□□ 2.09
LTBP3-220ENST00000532661 ADGRA2Q96PE1 1338 aa28.12■■■□□ 2.09
LTBP3-220ENST00000532661 IDH1O75874 414 aaKnown RBP28.11■■■□□ 2.09
LTBP3-220ENST00000532661 CYP2C8P10632 490 aa28.11■■■□□ 2.09
LTBP3-220ENST00000532661 PLCG2P16885 1265 aa28.11■■■□□ 2.09
LTBP3-220ENST00000532661 ARHGEF6Q15052 776 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms