RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 OS9Q13438 667 aaPredicted RBP23.3■■□□□ 1.32
SSH3-209ENST00000532600 NOL9Q5SY16 702 aaKnown RBP23.3■■□□□ 1.32
SSH3-209ENST00000532600 SLF2Q8IX21 1173 aa23.3■■□□□ 1.32
SSH3-209ENST00000532600 DBNLQ9UJU6 430 aaKnown RBP23.3■■□□□ 1.32
SSH3-209ENST00000532600 HTTP42858 3142 aa23.3■■□□□ 1.32
SSH3-209ENST00000532600 SOX10P56693 466 aa23.29■■□□□ 1.32
SSH3-209ENST00000532600 PPATQ06203 517 aa23.29■■□□□ 1.32
SSH3-209ENST00000532600 FBXO46Q6PJ61 603 aaPredicted RBP23.29■■□□□ 1.32
SSH3-209ENST00000532600 OTOP1Q7RTM1 612 aa23.29■■□□□ 1.32
SSH3-209ENST00000532600 CD99L2Q8TCZ2 262 aa23.29■■□□□ 1.32
SSH3-209ENST00000532600 EAF2Q96CJ1 260 aaPredicted RBP23.29■■□□□ 1.32
SSH3-209ENST00000532600 MAST2Q6P0Q8 1798 aa23.29■■□□□ 1.32
SSH3-209ENST00000532600 BTBD19C9JJ37 291 aa23.28■■□□□ 1.32
SSH3-209ENST00000532600 CYP2E1P05181 493 aaPredicted RBP23.28■■□□□ 1.32
SSH3-209ENST00000532600 CETPP11597 493 aa23.28■■□□□ 1.32
SSH3-209ENST00000532600 PICALMQ13492 652 aa23.28■■□□□ 1.32
SSH3-209ENST00000532600 MOGSQ13724 837 aa23.28■■□□□ 1.32
SSH3-209ENST00000532600 CCDC8Q9H0W5 538 aaPredicted RBP23.28■■□□□ 1.32
SSH3-209ENST00000532600 RAI14Q9P0K7 980 aa23.28■■□□□ 1.32
SSH3-209ENST00000532600 SNAPC2Q13487 334 aa23.27■■□□□ 1.32
SSH3-209ENST00000532600 TAF1CQ15572 869 aaPredicted RBP23.27■■□□□ 1.32
SSH3-209ENST00000532600 TTC39AQ5SRH9 613 aa23.27■■□□□ 1.32
SSH3-209ENST00000532600 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.27■■□□□ 1.32
SSH3-209ENST00000532600 ZNF512BQ96KM6 892 aaPredicted RBP23.27■■□□□ 1.32
SSH3-209ENST00000532600 KCNH4Q9UQ05 1017 aa23.27■■□□□ 1.32
SSH3-209ENST00000532600 EXOC6BQ9Y2D4 811 aa23.27■■□□□ 1.32
SSH3-209ENST00000532600 ADGRA1Q86SQ6 560 aa23.26■■□□□ 1.31
SSH3-209ENST00000532600 PIH1D3Q9NQM4 214 aaKnown RBP23.26■■□□□ 1.31
SSH3-209ENST00000532600 TRIM17Q9Y577 477 aa23.26■■□□□ 1.31
SSH3-209ENST00000532600 TNRC18O15417 2968 aaPredicted RBP23.26■■□□□ 1.31
SSH3-209ENST00000532600 ZSWIM8A7E2V4 1837 aa23.26■■□□□ 1.31
SSH3-209ENST00000532600 NPM3O75607 178 aaKnown RBP23.25■■□□□ 1.31
SSH3-209ENST00000532600 ZAP70P43403 619 aa23.25■■□□□ 1.31
SSH3-209ENST00000532600 GSTO1P78417 241 aa23.25■■□□□ 1.31
SSH3-209ENST00000532600 SP3Q02447 781 aa23.25■■□□□ 1.31
SSH3-209ENST00000532600 MLLT1Q03111 559 aaPredicted RBP23.25■■□□□ 1.31
SSH3-209ENST00000532600 CCDC158Q5M9N0 1113 aa23.25■■□□□ 1.31
SSH3-209ENST00000532600 SIRT2Q8IXJ6 389 aa23.25■■□□□ 1.31
SSH3-209ENST00000532600 LRP2BPQ9P2M1 347 aa23.25■■□□□ 1.31
SSH3-209ENST00000532600 COG6Q9Y2V7 657 aa23.25■■□□□ 1.31
SSH3-209ENST00000532600 PHIPQ8WWQ0 1821 aa23.24■■□□□ 1.31
SSH3-209ENST00000532600 CDK5RAP2Q96SN8 1893 aa23.24■■□□□ 1.31
SSH3-209ENST00000532600 LDHCP07864 332 aa23.24■■□□□ 1.31
SSH3-209ENST00000532600 ZSCAN29Q8IWY8 852 aaPredicted RBP23.24■■□□□ 1.31
SSH3-209ENST00000532600 ERO1AQ96HE7 468 aa23.24■■□□□ 1.31
SSH3-209ENST00000532600 ZFYVE28Q9HCC9 887 aa23.24■■□□□ 1.31
SSH3-209ENST00000532600 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.24■■□□□ 1.31
SSH3-209ENST00000532600 SCYL3Q8IZE3 742 aa23.23■■□□□ 1.31
SSH3-209ENST00000532600 SH3RF3Q8TEJ3 882 aaPredicted RBP23.23■■□□□ 1.31
SSH3-209ENST00000532600 ZCCHC17Q9NP64 241 aaKnown RBP23.23■■□□□ 1.31
SSH3-209ENST00000532600 ZBTB40Q9NUA8 1239 aa23.23■■□□□ 1.31
SSH3-209ENST00000532600 SIPA1L1O43166 1804 aa23.23■■□□□ 1.31
SSH3-209ENST00000532600 DOCK1Q14185 1865 aa23.23■■□□□ 1.31
SSH3-209ENST00000532600 COL2A1P02458 1487 aaPredicted RBP23.23■■□□□ 1.31
SSH3-209ENST00000532600 FAM196BA6NMK8 535 aa23.22■■□□□ 1.31
SSH3-209ENST00000532600 OSBPL5Q9H0X9 879 aaPredicted RBP23.22■■□□□ 1.31
SSH3-209ENST00000532600 PTPN22Q9Y2R2 807 aa23.22■■□□□ 1.31
SSH3-209ENST00000532600 NDUFB9Q9Y6M9 179 aa23.22■■□□□ 1.31
SSH3-209ENST00000532600 TLR2O60603 784 aa23.21■■□□□ 1.31
SSH3-209ENST00000532600 MAP4K4O95819 1239 aaPredicted RBP23.21■■□□□ 1.31
SSH3-209ENST00000532600 PTPRAP18433 802 aa23.21■■□□□ 1.31
SSH3-209ENST00000532600 C20orf194Q5TEA3 1177 aa23.21■■□□□ 1.31
SSH3-209ENST00000532600 NAA16Q6N069 864 aaPredicted RBP23.21■■□□□ 1.31
SSH3-209ENST00000532600 ADGRA2Q96PE1 1338 aa23.21■■□□□ 1.31
SSH3-209ENST00000532600 PTPRFP10586 1907 aa23.2■■□□□ 1.3
SSH3-209ENST00000532600 FOCADQ5VW36 1801 aa23.2■■□□□ 1.3
SSH3-209ENST00000532600 MS4A1P11836 297 aa23.2■■□□□ 1.3
SSH3-209ENST00000532600 RRP1BQ14684 758 aaKnown RBP23.2■■□□□ 1.3
SSH3-209ENST00000532600 GPAT2Q6NUI2 795 aa23.2■■□□□ 1.3
SSH3-209ENST00000532600 ANKRD23Q86SG2 305 aa23.2■■□□□ 1.3
SSH3-209ENST00000532600 TEX11Q8IYF3 940 aa23.2■■□□□ 1.3
SSH3-209ENST00000532600 ARHGAP39Q9C0H5 1083 aa23.2■■□□□ 1.3
SSH3-209ENST00000532600 EFCC1Q9HA90 598 aa23.2■■□□□ 1.3
SSH3-209ENST00000532600 AATFQ9NY61 560 aaKnown RBP eCLIP23.2■■□□□ 1.3
SSH3-209ENST00000532600 TBC1D12O60347 775 aa23.19■■□□□ 1.3
SSH3-209ENST00000532600 PPP4CP60510 307 aa23.19■■□□□ 1.3
SSH3-209ENST00000532600 CCDC84Q86UT8 332 aaPredicted RBP23.19■■□□□ 1.3
SSH3-209ENST00000532600 AACSQ86V21 672 aa23.19■■□□□ 1.3
SSH3-209ENST00000532600 RHPN1Q8TCX5 695 aa23.19■■□□□ 1.3
SSH3-209ENST00000532600 ANTXR1Q9H6X2 564 aa23.19■■□□□ 1.3
SSH3-209ENST00000532600 IL1RAPL2Q9NP60 686 aa23.19■■□□□ 1.3
SSH3-209ENST00000532600 DDX19BQ9UMR2 479 aa23.19■■□□□ 1.3
SSH3-209ENST00000532600 AFG3L2Q9Y4W6 797 aa23.19■■□□□ 1.3
SSH3-209ENST00000532600 ZHX2Q9Y6X8 837 aa23.19■■□□□ 1.3
SSH3-209ENST00000532600 PDHXO00330 501 aa23.18■■□□□ 1.3
SSH3-209ENST00000532600 CXCL11O14625 94 aa23.18■■□□□ 1.3
SSH3-209ENST00000532600 CTNND1O60716 968 aaKnown RBP23.18■■□□□ 1.3
SSH3-209ENST00000532600 C17orf99Q6UX52 265 aa23.18■■□□□ 1.3
SSH3-209ENST00000532600 CTGFP29279 349 aa23.17■■□□□ 1.3
SSH3-209ENST00000532600 ERC1Q8IUD2 1116 aa23.17■■□□□ 1.3
SSH3-209ENST00000532600 RPAP2Q8IXW5 612 aaPredicted RBP23.17■■□□□ 1.3
SSH3-209ENST00000532600 A0A0G2JLL6 359 aaPredicted RBP23.16■■□□□ 1.3
SSH3-209ENST00000532600 DYNLL1P63167 89 aaKnown RBP23.16■■□□□ 1.3
SSH3-209ENST00000532600 PRRT2Q7Z6L0 340 aaPredicted RBP23.16■■□□□ 1.3
SSH3-209ENST00000532600 PICK1Q9NRD5 415 aa23.16■■□□□ 1.3
SSH3-209ENST00000532600 ATAD5Q96QE3 1844 aa23.16■■□□□ 1.3
SSH3-209ENST00000532600 LACTBP83111 547 aaPredicted RBP23.15■■□□□ 1.3
SSH3-209ENST00000532600 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.15■■□□□ 1.3
SSH3-209ENST00000532600 CPA4Q9UI42 421 aa23.15■■□□□ 1.3
SSH3-209ENST00000532600 FLT1P17948 1338 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms