RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 PPATQ06203 517 aa19.42■□□□□ 0.7
LDLRAD3-205ENST00000532490 CCDC158Q5M9N0 1113 aa19.42■□□□□ 0.7
LDLRAD3-205ENST00000532490 TTC39AQ5SRH9 613 aa19.42■□□□□ 0.7
LDLRAD3-205ENST00000532490 NOL9Q5SY16 702 aaKnown RBP19.42■□□□□ 0.7
LDLRAD3-205ENST00000532490 FAM43AQ8N2R8 423 aa19.42■□□□□ 0.7
LDLRAD3-205ENST00000532490 SNRKQ9NRH2 765 aa19.42■□□□□ 0.7
LDLRAD3-205ENST00000532490 TLR7Q9NYK1 1049 aaKnown RBP19.42■□□□□ 0.7
LDLRAD3-205ENST00000532490 RCAN3Q9UKA8 241 aa19.42■□□□□ 0.7
LDLRAD3-205ENST00000532490 CYP2E1P05181 493 aaPredicted RBP19.41■□□□□ 0.7
LDLRAD3-205ENST00000532490 ZBTB40Q9NUA8 1239 aa19.41■□□□□ 0.7
LDLRAD3-205ENST00000532490 RAI14Q9P0K7 980 aa19.41■□□□□ 0.7
LDLRAD3-205ENST00000532490 HPS5Q9UPZ3 1129 aa19.41■□□□□ 0.7
LDLRAD3-205ENST00000532490 MYO5AQ9Y4I1 1855 aaKnown RBP19.4■□□□□ 0.7
LDLRAD3-205ENST00000532490 MAP4K4O95819 1239 aaPredicted RBP19.4■□□□□ 0.7
LDLRAD3-205ENST00000532490 CETPP11597 493 aa19.4■□□□□ 0.7
LDLRAD3-205ENST00000532490 SNAPC2Q13487 334 aa19.4■□□□□ 0.7
LDLRAD3-205ENST00000532490 CCDC8Q9H0W5 538 aaPredicted RBP19.4■□□□□ 0.7
LDLRAD3-205ENST00000532490 LRP2BPQ9P2M1 347 aa19.4■□□□□ 0.7
LDLRAD3-205ENST00000532490 DDX19BQ9UMR2 479 aa19.4■□□□□ 0.7
LDLRAD3-205ENST00000532490 KCNH4Q9UQ05 1017 aa19.4■□□□□ 0.7
LDLRAD3-205ENST00000532490 EXOC6BQ9Y2D4 811 aa19.4■□□□□ 0.7
LDLRAD3-205ENST00000532490 COG6Q9Y2V7 657 aa19.4■□□□□ 0.7
LDLRAD3-205ENST00000532490 BTBD19C9JJ37 291 aa19.39■□□□□ 0.69
LDLRAD3-205ENST00000532490 SLURP2P0DP57 97 aa19.39■□□□□ 0.69
LDLRAD3-205ENST00000532490 CAP1Q01518 475 aa19.39■□□□□ 0.69
LDLRAD3-205ENST00000532490 PICALMQ13492 652 aa19.39■□□□□ 0.69
LDLRAD3-205ENST00000532490 FBXO46Q6PJ61 603 aaPredicted RBP19.39■□□□□ 0.69
LDLRAD3-205ENST00000532490 SIRT2Q8IXJ6 389 aa19.39■□□□□ 0.69
LDLRAD3-205ENST00000532490 ZCCHC17Q9NP64 241 aaKnown RBP19.39■□□□□ 0.69
LDLRAD3-205ENST00000532490 ZAP70P43403 619 aa19.38■□□□□ 0.69
LDLRAD3-205ENST00000532490 RPAP2Q8IXW5 612 aaPredicted RBP19.38■□□□□ 0.69
LDLRAD3-205ENST00000532490 HTTP42858 3142 aa19.37■□□□□ 0.69
LDLRAD3-205ENST00000532490 IGSF3O75054 1194 aa19.37■□□□□ 0.69
LDLRAD3-205ENST00000532490 SP3Q02447 781 aa19.37■□□□□ 0.69
LDLRAD3-205ENST00000532490 MOGSQ13724 837 aa19.37■□□□□ 0.69
LDLRAD3-205ENST00000532490 TAF1CQ15572 869 aaPredicted RBP19.37■□□□□ 0.69
LDLRAD3-205ENST00000532490 OTOP1Q7RTM1 612 aa19.37■□□□□ 0.69
LDLRAD3-205ENST00000532490 ERC1Q8IUD2 1116 aa19.37■□□□□ 0.69
LDLRAD3-205ENST00000532490 ZSCAN29Q8IWY8 852 aaPredicted RBP19.37■□□□□ 0.69
LDLRAD3-205ENST00000532490 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.37■□□□□ 0.69
LDLRAD3-205ENST00000532490 ERO1AQ96HE7 468 aa19.37■□□□□ 0.69
LDLRAD3-205ENST00000532490 ZFYVE28Q9HCC9 887 aa19.37■□□□□ 0.69
LDLRAD3-205ENST00000532490 PIH1D3Q9NQM4 214 aaKnown RBP19.37■□□□□ 0.69
LDLRAD3-205ENST00000532490 MAST2Q6P0Q8 1798 aa19.37■□□□□ 0.69
LDLRAD3-205ENST00000532490 COL2A1P02458 1487 aaPredicted RBP19.36■□□□□ 0.69
LDLRAD3-205ENST00000532490 TBC1D12O60347 775 aa19.36■□□□□ 0.69
LDLRAD3-205ENST00000532490 PPP4CP60510 307 aa19.36■□□□□ 0.69
LDLRAD3-205ENST00000532490 NAA16Q6N069 864 aaPredicted RBP19.36■□□□□ 0.69
LDLRAD3-205ENST00000532490 ADGRA1Q86SQ6 560 aa19.36■□□□□ 0.69
LDLRAD3-205ENST00000532490 SCYL3Q8IZE3 742 aa19.36■□□□□ 0.69
LDLRAD3-205ENST00000532490 RHPN1Q8TCX5 695 aa19.36■□□□□ 0.69
LDLRAD3-205ENST00000532490 CD99L2Q8TCZ2 262 aa19.36■□□□□ 0.69
LDLRAD3-205ENST00000532490 TRIM17Q9Y577 477 aa19.36■□□□□ 0.69
LDLRAD3-205ENST00000532490 HSP90AB4PQ58FF6 505 aa19.35■□□□□ 0.69
LDLRAD3-205ENST00000532490 C20orf194Q5TEA3 1177 aa19.35■□□□□ 0.69
LDLRAD3-205ENST00000532490 SH3RF3Q8TEJ3 882 aaPredicted RBP19.35■□□□□ 0.69
LDLRAD3-205ENST00000532490 OSBPL5Q9H0X9 879 aaPredicted RBP19.35■□□□□ 0.69
LDLRAD3-205ENST00000532490 CXCL11O14625 94 aa19.34■□□□□ 0.69
LDLRAD3-205ENST00000532490 TLR2O60603 784 aa19.34■□□□□ 0.69
LDLRAD3-205ENST00000532490 CTNND1O60716 968 aaKnown RBP19.34■□□□□ 0.69
LDLRAD3-205ENST00000532490 PTPRAP18433 802 aa19.34■□□□□ 0.69
LDLRAD3-205ENST00000532490 MLLT1Q03111 559 aaPredicted RBP19.34■□□□□ 0.69
LDLRAD3-205ENST00000532490 PDE3AQ14432 1141 aa19.34■□□□□ 0.69
LDLRAD3-205ENST00000532490 ANKRD23Q86SG2 305 aa19.34■□□□□ 0.69
LDLRAD3-205ENST00000532490 AACSQ86V21 672 aa19.34■□□□□ 0.69
LDLRAD3-205ENST00000532490 TEX11Q8IYF3 940 aa19.34■□□□□ 0.69
LDLRAD3-205ENST00000532490 AATFQ9NY61 560 aaKnown RBP eCLIP19.34■□□□□ 0.69
LDLRAD3-205ENST00000532490 CDK5RAP2Q96SN8 1893 aa19.33■□□□□ 0.69
LDLRAD3-205ENST00000532490 PHIPQ8WWQ0 1821 aa19.33■□□□□ 0.69
LDLRAD3-205ENST00000532490 SOX10P56693 466 aa19.33■□□□□ 0.68
LDLRAD3-205ENST00000532490 IL1RAPL2Q9NP60 686 aa19.33■□□□□ 0.68
LDLRAD3-205ENST00000532490 PTPN22Q9Y2R2 807 aa19.33■□□□□ 0.68
LDLRAD3-205ENST00000532490 AFG3L2Q9Y4W6 797 aa19.33■□□□□ 0.68
LDLRAD3-205ENST00000532490 NDUFB9Q9Y6M9 179 aa19.33■□□□□ 0.68
LDLRAD3-205ENST00000532490 ZHX2Q9Y6X8 837 aa19.33■□□□□ 0.68
LDLRAD3-205ENST00000532490 DOCK1Q14185 1865 aa19.33■□□□□ 0.68
LDLRAD3-205ENST00000532490 BAG3O95817 575 aa19.32■□□□□ 0.68
LDLRAD3-205ENST00000532490 GPAT2Q6NUI2 795 aa19.32■□□□□ 0.68
LDLRAD3-205ENST00000532490 CHMP4BQ9H444 224 aaKnown RBP19.32■□□□□ 0.68
LDLRAD3-205ENST00000532490 ANTXR1Q9H6X2 564 aa19.32■□□□□ 0.68
LDLRAD3-205ENST00000532490 EFCC1Q9HA90 598 aa19.32■□□□□ 0.68
LDLRAD3-205ENST00000532490 FOCADQ5VW36 1801 aa19.32■□□□□ 0.68
LDLRAD3-205ENST00000532490 ADGRA2Q96PE1 1338 aa19.31■□□□□ 0.68
LDLRAD3-205ENST00000532490 SIPA1L1O43166 1804 aa19.31■□□□□ 0.68
LDLRAD3-205ENST00000532490 FAM196BA6NMK8 535 aa19.31■□□□□ 0.68
LDLRAD3-205ENST00000532490 HMMRO75330 724 aa19.31■□□□□ 0.68
LDLRAD3-205ENST00000532490 PLCG2P16885 1265 aa19.31■□□□□ 0.68
LDLRAD3-205ENST00000532490 C17orf99Q6UX52 265 aa19.31■□□□□ 0.68
LDLRAD3-205ENST00000532490 KIF1BPQ96EK5 621 aa19.31■□□□□ 0.68
LDLRAD3-205ENST00000532490 NOL10Q9BSC4 688 aaKnown RBP19.31■□□□□ 0.68
LDLRAD3-205ENST00000532490 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.31■□□□□ 0.68
LDLRAD3-205ENST00000532490 PICK1Q9NRD5 415 aa19.31■□□□□ 0.68
LDLRAD3-205ENST00000532490 PTPRFP10586 1907 aa19.31■□□□□ 0.68
LDLRAD3-205ENST00000532490 A0A0G2JLL6 359 aaPredicted RBP19.3■□□□□ 0.68
LDLRAD3-205ENST00000532490 PDHXO00330 501 aa19.3■□□□□ 0.68
LDLRAD3-205ENST00000532490 RRP1BQ14684 758 aaKnown RBP19.3■□□□□ 0.68
LDLRAD3-205ENST00000532490 PRRT2Q7Z6L0 340 aaPredicted RBP19.3■□□□□ 0.68
LDLRAD3-205ENST00000532490 TGFBRAP1Q8WUH2 860 aa19.3■□□□□ 0.68
LDLRAD3-205ENST00000532490 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.3■□□□□ 0.68
LDLRAD3-205ENST00000532490 CENPFP49454 3210 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms