RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 ST13P4Q8IZP2 240 aaPredicted RBP9.02□□□□□ -0.97
CTNND1-231ENST00000532463 NOX5Q96PH1 765 aa9.02□□□□□ -0.97
CTNND1-231ENST00000532463 SH3GL2Q99962 352 aa9.02□□□□□ -0.97
CTNND1-231ENST00000532463 CLSTN2Q9H4D0 955 aa9.02□□□□□ -0.97
CTNND1-231ENST00000532463 CABP5Q9NP86 173 aa9.02□□□□□ -0.97
CTNND1-231ENST00000532463 MYL6BP14649 208 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 DEUP1Q05D60 604 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 RAPGEF1Q13905 1077 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 SND1Q7KZF4 910 aaKnown RBP eCLIP9.01□□□□□ -0.97
CTNND1-231ENST00000532463 DDX54Q8TDD1 881 aaKnown RBP9.01□□□□□ -0.97
CTNND1-231ENST00000532463 PHF23Q9BUL5 403 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-231ENST00000532463 IFNKQ9P0W0 207 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 FAM8A1Q9UBU6 413 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 TYRO3Q06418 890 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 CASC4Q6P4E1 433 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 CEP70Q8NHQ1 597 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 GOLGA5Q8TBA6 731 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 RNF34Q969K3 372 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 PPWD1Q96BP3 646 aaKnown RBP9.01□□□□□ -0.97
CTNND1-231ENST00000532463 STAC3Q96MF2 364 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 TRIM31Q9BZY9 425 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 SH2D4AQ9H788 454 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 VPS37BQ9H9H4 285 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 VAT1LQ9HCJ6 419 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 DACT1Q9NYF0 836 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 FLOT2Q14254 428 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 CWF19L2Q2TBE0 894 aaKnown RBP9.01□□□□□ -0.97
CTNND1-231ENST00000532463 MICU3Q86XE3 530 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 NCOA7Q8NI08 942 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 RAB17Q9H0T7 212 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 EXOC6BQ9Y2D4 811 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 RTL1A6NKG5 1358 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 CADPSQ9ULU8 1353 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 RAD54L2Q9Y4B4 1467 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 TRPA1O75762 1119 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 MRPS15P82914 257 aaKnown RBP9.01□□□□□ -0.97
CTNND1-231ENST00000532463 WDR44Q5JSH3 913 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 MGARPQ8TDB4 240 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 ZKSCAN3Q9BRR0 538 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 C6orf50Q9HD87 102 aa9.01□□□□□ -0.97
CTNND1-231ENST00000532463 PACSIN2Q9UNF0 486 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-231ENST00000532463 ARHGAP44Q17R89 818 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 CARD6Q9BX69 1037 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 PAIP2BQ9ULR5 123 aaKnown RBP9□□□□□ -0.97
CTNND1-231ENST00000532463 TSPY2A6NKD2 308 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 GSTA1P08263 222 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 GSTA2P09210 222 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 KRT79Q5XKE5 535 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 CYP26C1Q6V0L0 522 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 TRIML2Q8N7C3 387 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 TEKT1Q969V4 418 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9□□□□□ -0.97
CTNND1-231ENST00000532463 H0YC42 278 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 ATF3P18847 181 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 KRT4P19013 534 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 PSMD7P51665 324 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9□□□□□ -0.97
CTNND1-231ENST00000532463 NUTM2AQ8IVF1 878 aaPredicted RBP9□□□□□ -0.97
CTNND1-231ENST00000532463 SECISBP2LQ93073 1101 aaKnown RBP9□□□□□ -0.97
CTNND1-231ENST00000532463 DDX28Q9NUL7 540 aaKnown RBP9□□□□□ -0.97
CTNND1-231ENST00000532463 MAP3K7O43318 606 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 GPC4O75487 556 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 ASPHQ12797 758 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 ELF2Q15723 593 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 SLC9C1Q4G0N8 1177 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 NUTM2GQ5VZR2 741 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 FAM212AQ96EL1 285 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 SAAL1Q96ER3 474 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 ZNF644Q9H582 1327 aaPredicted RBP9□□□□□ -0.97
CTNND1-231ENST00000532463 TBC1D8O95759 1140 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 LDHCP07864 332 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 SLC5A1P13866 664 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 TAF11Q15544 211 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 CFAP221Q4G0U5 840 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 TMEM132EQ6IEE7 984 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 EFCAB13Q8IY85 973 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 SYCE1Q8N0S2 351 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 BCAS4Q8TDM0 211 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 DDX41Q9UJV9 622 aaKnown RBP9□□□□□ -0.97
CTNND1-231ENST00000532463 MAD1L1Q9Y6D9 718 aa9□□□□□ -0.97
CTNND1-231ENST00000532463 RAD51AP2Q09MP3 1159 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 MFSD6Q6ZSS7 791 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 CCDC105Q8IYK2 499 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 CAPS2Q9BXY5 557 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 TRIM8Q9BZR9 551 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 SUN1O94901 812 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 NPR1P16066 1061 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 RANBP1P43487 201 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 SF3A3Q12874 501 aaKnown RBP eCLIP8.99□□□□□ -0.972e-7■■■□□ 14.9
CTNND1-231ENST00000532463 SNX1Q13596 522 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 BRD3Q15059 726 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 MYRIPQ8NFW9 859 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 DHX58Q96C10 678 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 NAP1L4Q99733 375 aaKnown RBP8.99□□□□□ -0.97
CTNND1-231ENST00000532463 SPG7Q9UQ90 795 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 GNAQP50148 359 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 TMTC2Q8N394 836 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 NME8Q8N427 588 aa8.99□□□□□ -0.97
CTNND1-231ENST00000532463 DBNLQ9UJU6 430 aaKnown RBP8.99□□□□□ -0.97
CTNND1-231ENST00000532463 RAD50Q92878 1312 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms