RNA–Protein interactions for RNA: ENST00000531440.5

RNF170-208, Transcript of ring finger protein 170, humanhuman

TSL 4

Gene RNF170, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170-208ENST00000531440 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.34■□□□□ 0.21
RNF170-208ENST00000531440 MTMR10Q9NXD2 777 aa16.34■□□□□ 0.21
RNF170-208ENST00000531440 IFIT1P09914 478 aaKnown RBP16.33■□□□□ 0.2
RNF170-208ENST00000531440 CDC42EP5Q6NZY7 148 aa16.33■□□□□ 0.2
RNF170-208ENST00000531440 GADL1Q6ZQY3 521 aa16.33■□□□□ 0.2
RNF170-208ENST00000531440 KAZALD1Q96I82 304 aa16.33■□□□□ 0.2
RNF170-208ENST00000531440 SUCLG2Q96I99 432 aa16.33■□□□□ 0.2
RNF170-208ENST00000531440 NBPF3Q9H094 633 aa16.33■□□□□ 0.2
RNF170-208ENST00000531440 DAGLAQ9Y4D2 1042 aa16.33■□□□□ 0.2
RNF170-208ENST00000531440 AFG3L2Q9Y4W6 797 aa16.33■□□□□ 0.2
RNF170-208ENST00000531440 ZHX2Q9Y6X8 837 aa16.33■□□□□ 0.2
RNF170-208ENST00000531440 LOC285556D6RIA3 1793 aa16.33■□□□□ 0.2
RNF170-208ENST00000531440 HMGCRP04035 888 aa16.32■□□□□ 0.2
RNF170-208ENST00000531440 PTPRAP18433 802 aa16.32■□□□□ 0.2
RNF170-208ENST00000531440 ZEB1P37275 1124 aaPredicted RBP16.32■□□□□ 0.2
RNF170-208ENST00000531440 NFIAQ12857 509 aa16.32■□□□□ 0.2
RNF170-208ENST00000531440 PUM3Q15397 648 aaKnown RBP16.32■□□□□ 0.2
RNF170-208ENST00000531440 RABL6Q3YEC7 729 aaPredicted RBP16.32■□□□□ 0.2
RNF170-208ENST00000531440 Q7L0L9 218 aa16.32■□□□□ 0.2
RNF170-208ENST00000531440 DIS3LQ8TF46 1054 aaKnown RBP16.32■□□□□ 0.2
RNF170-208ENST00000531440 ZMYND8Q9ULU4 1186 aaPredicted RBP16.32■□□□□ 0.2
RNF170-208ENST00000531440 ATAD5Q96QE3 1844 aa16.31■□□□□ 0.2
RNF170-208ENST00000531440 ATRNL1Q5VV63 1379 aa16.31■□□□□ 0.2
RNF170-208ENST00000531440 UTYO14607 1347 aa16.31■□□□□ 0.2
RNF170-208ENST00000531440 PHF20L1A8MW92 1017 aa16.31■□□□□ 0.2
RNF170-208ENST00000531440 FAM110CQ1W6H9 321 aa16.31■□□□□ 0.2
RNF170-208ENST00000531440 LRRC24Q50LG9 513 aa16.31■□□□□ 0.2
RNF170-208ENST00000531440 COL25A1Q9BXS0 654 aaPredicted RBP16.31■□□□□ 0.2
RNF170-208ENST00000531440 FAM198AQ9UFP1 575 aa16.31■□□□□ 0.2
RNF170-208ENST00000531440 PNMA3Q9UL41 463 aa16.31■□□□□ 0.2
RNF170-208ENST00000531440 TAOK2Q9UL54 1235 aa16.31■□□□□ 0.2
RNF170-208ENST00000531440 RPTORQ8N122 1335 aa16.3■□□□□ 0.2
RNF170-208ENST00000531440 FGFR2P21802 821 aa16.3■□□□□ 0.2
RNF170-208ENST00000531440 MAGEA10P43363 369 aaPredicted RBP16.3■□□□□ 0.2
RNF170-208ENST00000531440 BICC1Q9H694 974 aaKnown RBP16.3■□□□□ 0.2
RNF170-208ENST00000531440 HMX1Q9NP08 348 aaPredicted RBP16.3■□□□□ 0.2
RNF170-208ENST00000531440 AGTPBP1Q9UPW5 1226 aa16.3■□□□□ 0.2
RNF170-208ENST00000531440 PLXNB2O15031 1838 aa16.3■□□□□ 0.2
RNF170-208ENST00000531440 VCANP13611 3396 aa16.29■□□□□ 0.2
RNF170-208ENST00000531440 ENTPD3O75355 529 aa16.29■□□□□ 0.2
RNF170-208ENST00000531440 NBPF7P0C2Y1 421 aaPredicted RBP16.29■□□□□ 0.2
RNF170-208ENST00000531440 MAP3K10Q02779 954 aa16.29■□□□□ 0.2
RNF170-208ENST00000531440 EXOSC9Q06265 439 aaKnown RBP16.29■□□□□ 0.2
RNF170-208ENST00000531440 DIXDC1Q155Q3 683 aa16.29■□□□□ 0.2
RNF170-208ENST00000531440 SLC4A10Q6U841 1118 aa16.29■□□□□ 0.2
RNF170-208ENST00000531440 UBE2OQ9C0C9 1292 aaKnown RBP16.29■□□□□ 0.2
RNF170-208ENST00000531440 C11orf49Q9H6J7 331 aa16.29■□□□□ 0.2
RNF170-208ENST00000531440 USP40Q9NVE5 1235 aa16.29■□□□□ 0.2
RNF170-208ENST00000531440 LRRFIP2Q9Y608 721 aaKnown RBP16.29■□□□□ 0.2
RNF170-208ENST00000531440 CTNND1O60716 968 aaKnown RBP16.28■□□□□ 0.2
RNF170-208ENST00000531440 SLC5A1P13866 664 aa16.28■□□□□ 0.2
RNF170-208ENST00000531440 GCLCP48506 637 aaPredicted RBP16.28■□□□□ 0.2
RNF170-208ENST00000531440 WDR63Q8IWG1 891 aa16.28■□□□□ 0.2
RNF170-208ENST00000531440 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.28■□□□□ 0.2
RNF170-208ENST00000531440 ANKRD13CQ8N6S4 541 aa16.28■□□□□ 0.2
RNF170-208ENST00000531440 IDI2Q9BXS1 227 aa16.28■□□□□ 0.2
RNF170-208ENST00000531440 LDHBP07195 334 aaKnown RBP16.27■□□□□ 0.2
RNF170-208ENST00000531440 SYN1P17600 705 aa16.27■□□□□ 0.2
RNF170-208ENST00000531440 PROCA1Q8NCQ7 364 aaPredicted RBP16.27■□□□□ 0.2
RNF170-208ENST00000531440 LPIN2Q92539 896 aa16.27■□□□□ 0.2
RNF170-208ENST00000531440 OGDHLQ9ULD0 1010 aa16.27■□□□□ 0.2
RNF170-208ENST00000531440 FRMPD3Q5JV73 1810 aa16.26■□□□□ 0.19
RNF170-208ENST00000531440 SALL1Q9NSC2 1324 aa16.26■□□□□ 0.19
RNF170-208ENST00000531440 TRIM75PA6NK02 468 aa16.26■□□□□ 0.19
RNF170-208ENST00000531440 PRDX5P30044 214 aa16.26■□□□□ 0.19
RNF170-208ENST00000531440 RGS3P49796 1198 aa16.26■□□□□ 0.19
RNF170-208ENST00000531440 PABPC4Q13310 644 aaKnown RBP eCLIP16.26■□□□□ 0.19
RNF170-208ENST00000531440 FAM109BQ6ICB4 259 aaPredicted RBP16.26■□□□□ 0.19
RNF170-208ENST00000531440 ZFPM1Q8IX07 1006 aa16.26■□□□□ 0.19
RNF170-208ENST00000531440 ANKRD44Q8N8A2 993 aa16.26■□□□□ 0.19
RNF170-208ENST00000531440 SPINK5Q9NQ38 1064 aaPredicted RBP16.26■□□□□ 0.19
RNF170-208ENST00000531440 RFX7Q2KHR2 1363 aa16.26■□□□□ 0.19
RNF170-208ENST00000531440 ZSCAN29Q8IWY8 852 aaPredicted RBP16.25■□□□□ 0.19
RNF170-208ENST00000531440 GNL3LQ9NVN8 582 aaKnown RBP16.25■□□□□ 0.19
RNF170-208ENST00000531440 COL2A1P02458 1487 aaPredicted RBP16.24■□□□□ 0.19
RNF170-208ENST00000531440 TBC1D2Q9BYX2 928 aa16.24■□□□□ 0.19
RNF170-208ENST00000531440 GJD2Q9UKL4 321 aa16.24■□□□□ 0.19
RNF170-208ENST00000531440 LAMA2P24043 3122 aaKnown RBP16.23■□□□□ 0.19
RNF170-208ENST00000531440 MAST2Q6P0Q8 1798 aa16.23■□□□□ 0.19
RNF170-208ENST00000531440 SEMA3EO15041 775 aa16.23■□□□□ 0.19
RNF170-208ENST00000531440 ZBTB22O15209 634 aa16.23■□□□□ 0.19
RNF170-208ENST00000531440 TREML2Q5T2D2 321 aa16.23■□□□□ 0.19
RNF170-208ENST00000531440 SLF2Q8IX21 1173 aa16.23■□□□□ 0.19
RNF170-208ENST00000531440 ZGPATQ8N5A5 531 aaKnown RBP16.23■□□□□ 0.19
RNF170-208ENST00000531440 KLHDC4Q8TBB5 520 aa16.23■□□□□ 0.19
RNF170-208ENST00000531440 DENND2AQ9ULE3 1009 aa16.23■□□□□ 0.19
RNF170-208ENST00000531440 GAKO14976 1311 aa16.22■□□□□ 0.19
RNF170-208ENST00000531440 PFASO15067 1338 aa16.22■□□□□ 0.19
RNF170-208ENST00000531440 SPTBN5Q9NRC6 3674 aaKnown RBP16.22■□□□□ 0.19
RNF170-208ENST00000531440 POTEB2H3BUK9 544 aa16.22■□□□□ 0.19
RNF170-208ENST00000531440 EYA2O00167 538 aa16.22■□□□□ 0.19
RNF170-208ENST00000531440 MAP3K21Q5TCX8 1036 aa16.22■□□□□ 0.19
RNF170-208ENST00000531440 SH3BP5LQ7L8J4 393 aa16.22■□□□□ 0.19
RNF170-208ENST00000531440 TRMT44Q8IYL2 757 aaKnown RBP16.22■□□□□ 0.19
RNF170-208ENST00000531440 TTC28Q96AY4 2481 aa16.22■□□□□ 0.19
RNF170-208ENST00000531440 DDTLA6NHG4 134 aaPredicted RBP16.21■□□□□ 0.19
RNF170-208ENST00000531440 TBC1D12O60347 775 aa16.21■□□□□ 0.19
RNF170-208ENST00000531440 COL6A1P12109 1028 aa16.21■□□□□ 0.19
RNF170-208ENST00000531440 OSBPL5Q9H0X9 879 aaPredicted RBP16.21■□□□□ 0.19
RNF170-208ENST00000531440 FBXO3Q9UK99 471 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms