RNA–Protein interactions for RNA: ENST00000531339.5

SIPA1-207, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 5

Gene SIPA1, Length 799 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-207ENST00000531339 EPB41L4AQ9HCS5 686 aaPredicted RBP21.72■■□□□ 1.07
SIPA1-207ENST00000531339 ZBTB12Q9Y330 459 aaPredicted RBP21.72■■□□□ 1.07
SIPA1-207ENST00000531339 USP17L8P0C7I0 530 aa21.71■■□□□ 1.07
SIPA1-207ENST00000531339 RBM5P52756 815 aaKnown RBP eCLIP21.71■■□□□ 1.07
SIPA1-207ENST00000531339 RHBDL3P58872 404 aa21.71■■□□□ 1.07
SIPA1-207ENST00000531339 KRT32Q14532 448 aa21.71■■□□□ 1.07
SIPA1-207ENST00000531339 RABEP1Q15276 862 aa21.71■■□□□ 1.07
SIPA1-207ENST00000531339 TEX11Q8IYF3 940 aa21.71■■□□□ 1.07
SIPA1-207ENST00000531339 RASEFQ8IZ41 740 aa21.71■■□□□ 1.07
SIPA1-207ENST00000531339 SDR42E1Q8WUS8 393 aa21.71■■□□□ 1.07
SIPA1-207ENST00000531339 RASSF10A6NK89 507 aa21.7■■□□□ 1.06
SIPA1-207ENST00000531339 CYP21A2P08686 494 aa21.7■■□□□ 1.06
SIPA1-207ENST00000531339 USP5P45974 858 aa21.7■■□□□ 1.06
SIPA1-207ENST00000531339 APOBEC3HQ6NTF7 200 aaKnown RBP21.7■■□□□ 1.06
SIPA1-207ENST00000531339 GJA3Q9Y6H8 435 aa21.7■■□□□ 1.06
SIPA1-207ENST00000531339 PDE4DIPQ5VU43 2346 aa21.69■■□□□ 1.06
SIPA1-207ENST00000531339 ZNF213O14771 459 aa21.69■■□□□ 1.06
SIPA1-207ENST00000531339 CFAP100Q494V2 611 aa21.69■■□□□ 1.06
SIPA1-207ENST00000531339 LDHDQ86WU2 507 aa21.69■■□□□ 1.06
SIPA1-207ENST00000531339 DPF2Q92785 391 aa21.69■■□□□ 1.06
SIPA1-207ENST00000531339 DCP1AQ9NPI6 582 aaPredicted RBP21.69■■□□□ 1.06
SIPA1-207ENST00000531339 USP40Q9NVE5 1235 aa21.69■■□□□ 1.06
SIPA1-207ENST00000531339 WDR33Q9C0J8 1336 aaKnown RBP21.69■■□□□ 1.06
SIPA1-207ENST00000531339 ZNF541Q9H0D2 1346 aa21.69■■□□□ 1.06
SIPA1-207ENST00000531339 PSMA5P28066 241 aa21.68■■□□□ 1.06
SIPA1-207ENST00000531339 CDC42EP5Q6NZY7 148 aa21.68■■□□□ 1.06
SIPA1-207ENST00000531339 IL27Q8NEV9 243 aa21.68■■□□□ 1.06
SIPA1-207ENST00000531339 TGFBRAP1Q8WUH2 860 aa21.68■■□□□ 1.06
SIPA1-207ENST00000531339 ADAMTSL1Q8N6G6 1762 aa21.68■■□□□ 1.06
SIPA1-207ENST00000531339 SCN4AP35499 1836 aa21.68■■□□□ 1.06
SIPA1-207ENST00000531339 THSD7BQ9C0I4 1608 aa21.67■■□□□ 1.06
SIPA1-207ENST00000531339 GMPSP49915 693 aaPredicted RBP21.67■■□□□ 1.06
SIPA1-207ENST00000531339 DLGAP5Q15398 846 aa21.67■■□□□ 1.06
SIPA1-207ENST00000531339 DEFB115Q30KQ5 88 aa21.67■■□□□ 1.06
SIPA1-207ENST00000531339 TM6SF1Q9BZW5 370 aa21.67■■□□□ 1.06
SIPA1-207ENST00000531339 TAF1DQ9H5J8 278 aaPredicted RBP21.67■■□□□ 1.06
SIPA1-207ENST00000531339 ZNF280AP59817 542 aaPredicted RBP21.66■■□□□ 1.06
SIPA1-207ENST00000531339 HAND2P61296 217 aa21.66■■□□□ 1.06
SIPA1-207ENST00000531339 MAP2K1Q02750 393 aaPredicted RBP21.66■■□□□ 1.06
SIPA1-207ENST00000531339 SBK1Q52WX2 424 aa21.66■■□□□ 1.06
SIPA1-207ENST00000531339 GPC2Q8N158 579 aa21.66■■□□□ 1.06
SIPA1-207ENST00000531339 MTMR14Q8NCE2 650 aa21.66■■□□□ 1.06
SIPA1-207ENST00000531339 JAKMIP1Q96N16 626 aaKnown RBP21.66■■□□□ 1.06
SIPA1-207ENST00000531339 LAMA4Q16363 1823 aa21.65■■□□□ 1.06
SIPA1-207ENST00000531339 CTR9Q6PD62 1173 aa21.65■■□□□ 1.06
SIPA1-207ENST00000531339 AMOTL1Q8IY63 956 aa21.65■■□□□ 1.06
SIPA1-207ENST00000531339 MCM9Q9NXL9 1143 aa21.65■■□□□ 1.06
SIPA1-207ENST00000531339 ARPP21Q9UBL0 812 aaPredicted RBP21.65■■□□□ 1.06
SIPA1-207ENST00000531339 TAF6LQ9Y6J9 622 aa21.65■■□□□ 1.06
SIPA1-207ENST00000531339 SPDYE2BA6NHP3 402 aa21.64■■□□□ 1.05
SIPA1-207ENST00000531339 MINDY4BA8MYZ0 360 aa21.64■■□□□ 1.05
SIPA1-207ENST00000531339 USP17L12C9JPN9 530 aa21.64■■□□□ 1.05
SIPA1-207ENST00000531339 USP17L21D6R901 530 aa21.64■■□□□ 1.05
SIPA1-207ENST00000531339 SPDYE6P0CI01 402 aa21.64■■□□□ 1.05
SIPA1-207ENST00000531339 PPARAQ07869 468 aa21.64■■□□□ 1.05
SIPA1-207ENST00000531339 ADCK5Q3MIX3 580 aa21.64■■□□□ 1.05
SIPA1-207ENST00000531339 MAPKAPK5Q8IW41 473 aa21.64■■□□□ 1.05
SIPA1-207ENST00000531339 PRMT6Q96LA8 375 aaPredicted RBP21.64■■□□□ 1.05
SIPA1-207ENST00000531339 TSKSQ9UJT2 592 aa21.64■■□□□ 1.05
SIPA1-207ENST00000531339 ANAPC4Q9UJX5 808 aa21.64■■□□□ 1.05
SIPA1-207ENST00000531339 PCDHAC2Q9Y5I4 1007 aa21.64■■□□□ 1.05
SIPA1-207ENST00000531339 BAZ2AQ9UIF9 1905 aaKnown RBP21.64■■□□□ 1.05
SIPA1-207ENST00000531339 CDK5RAP2Q96SN8 1893 aa21.64■■□□□ 1.05
SIPA1-207ENST00000531339 FLT1P17948 1338 aa21.63■■□□□ 1.05
SIPA1-207ENST00000531339 E7EWF7 191 aa21.63■■□□□ 1.05
SIPA1-207ENST00000531339 WDHD1O75717 1129 aaPredicted RBP21.63■■□□□ 1.05
SIPA1-207ENST00000531339 CASTP20810 708 aaKnown RBP21.63■■□□□ 1.05
SIPA1-207ENST00000531339 NEK1Q96PY6 1258 aa21.63■■□□□ 1.05
SIPA1-207ENST00000531339 ZSWIM6Q9HCJ5 1215 aa21.63■■□□□ 1.05
SIPA1-207ENST00000531339 CNOT7Q9UIV1 285 aaKnown RBP21.63■■□□□ 1.05
SIPA1-207ENST00000531339 CYP46A1Q9Y6A2 500 aa21.63■■□□□ 1.05
SIPA1-207ENST00000531339 ECM29Q5VYK3 1845 aa21.63■■□□□ 1.05
SIPA1-207ENST00000531339 NAV1Q8NEY1 1877 aa21.62■■□□□ 1.05
SIPA1-207ENST00000531339 FOCADQ5VW36 1801 aa21.62■■□□□ 1.05
SIPA1-207ENST00000531339 ST18O60284 1047 aa21.62■■□□□ 1.05
SIPA1-207ENST00000531339 NPM3O75607 178 aaKnown RBP21.62■■□□□ 1.05
SIPA1-207ENST00000531339 HMGB1P09429 215 aaKnown RBP21.62■■□□□ 1.05
SIPA1-207ENST00000531339 NEK4P51957 841 aa21.62■■□□□ 1.05
SIPA1-207ENST00000531339 BLOC1S2Q6QNY1 142 aa21.62■■□□□ 1.05
SIPA1-207ENST00000531339 STOX1Q6ZVD7 989 aa21.62■■□□□ 1.05
SIPA1-207ENST00000531339 MICALL2Q8IY33 904 aa21.62■■□□□ 1.05
SIPA1-207ENST00000531339 IDI2Q9BXS1 227 aa21.62■■□□□ 1.05
SIPA1-207ENST00000531339 NBPF3Q9H094 633 aa21.62■■□□□ 1.05
SIPA1-207ENST00000531339 TDRD3Q9H7E2 651 aaKnown RBP21.62■■□□□ 1.05
SIPA1-207ENST00000531339 MYOZ2Q9NPC6 264 aa21.62■■□□□ 1.05
SIPA1-207ENST00000531339 TMOD2Q9NZR1 351 aa21.62■■□□□ 1.05
SIPA1-207ENST00000531339 H7C1D1 291 aa21.61■■□□□ 1.05
SIPA1-207ENST00000531339 MYO1BO43795 1136 aa21.61■■□□□ 1.05
SIPA1-207ENST00000531339 POLR3DP05423 398 aaPredicted RBP21.61■■□□□ 1.05
SIPA1-207ENST00000531339 SLC3A2P08195 630 aaKnown RBP21.61■■□□□ 1.05
SIPA1-207ENST00000531339 CTDSPL2Q05D32 466 aa21.61■■□□□ 1.05
SIPA1-207ENST00000531339 TRDNQ13061 729 aa21.61■■□□□ 1.05
SIPA1-207ENST00000531339 EAPPQ56P03 285 aaPredicted RBP21.61■■□□□ 1.05
SIPA1-207ENST00000531339 TBC1D10CQ8IV04 446 aa21.61■■□□□ 1.05
SIPA1-207ENST00000531339 ZBED3Q96IU2 234 aaPredicted RBP21.61■■□□□ 1.05
SIPA1-207ENST00000531339 L3MBTL3Q96JM7 780 aaPredicted RBP21.61■■□□□ 1.05
SIPA1-207ENST00000531339 UPF3BQ9BZI7 483 aaKnown RBP21.61■■□□□ 1.05
SIPA1-207ENST00000531339 MCOLN1Q9GZU1 580 aa21.61■■□□□ 1.05
SIPA1-207ENST00000531339 RNF41Q9H4P4 317 aaPredicted RBP21.61■■□□□ 1.05
SIPA1-207ENST00000531339 IQCA1LA6NCM1 817 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms