RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 SETSIPP0DME0 302 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 ADD1P35611 737 aaKnown RBP8.83□□□□□ -1
PTPRK-219ENST00000531050 SKOR1P84550 965 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 TUBB2AQ13885 445 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 SAFB2Q14151 953 aaKnown RBP eCLIP8.83□□□□□ -1
PTPRK-219ENST00000531050 RNF187Q5TA31 235 aaPredicted RBP8.83□□□□□ -1
PTPRK-219ENST00000531050 CCDC73Q6ZRK6 1079 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 MICALCLQ6ZW33 695 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 BRAPQ7Z569 592 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 CTAGE6Q86UF2 777 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 MFN1Q8IWA4 741 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 CTAGE4Q8IX94 777 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 EPAS1Q99814 870 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 SLX1AQ9BQ83 275 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 TUBB2BQ9BVA1 445 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 TSGA10Q9BZW7 698 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 TRPC6Q9Y210 931 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 KIF20BQ96Q89 1820 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 CD163L1Q9NR16 1453 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 SETD1AO15047 1707 aaKnown RBP8.82□□□□□ -1
PTPRK-219ENST00000531050 ERICH2A1L162 156 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 STX10O60499 249 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 SSBP05455 408 aaKnown RBP eCLIP8.82□□□□□ -1
PTPRK-219ENST00000531050 ATP5JP18859 108 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 HDGFP51858 240 aaKnown RBP8.82□□□□□ -1
PTPRK-219ENST00000531050 TBX2Q13207 712 aaPredicted RBP8.82□□□□□ -1
PTPRK-219ENST00000531050 AMOTQ4VCS5 1084 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 SLC30A9Q6PML9 568 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 RASSF8Q8NHQ8 419 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 TM6SF1Q9BZW5 370 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 YIPF3Q9GZM5 350 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 PICK1Q9NRD5 415 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 RCOR1Q9UKL0 485 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 CORO1CQ9ULV4 474 aaPredicted RBP8.82□□□□□ -1
PTPRK-219ENST00000531050 CYP46A1Q9Y6A2 500 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 A0A0U1RQJ8 604 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 TOP1P11387 765 aaKnown RBP8.82□□□□□ -1
PTPRK-219ENST00000531050 RANBP1P43487 201 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 CD151P48509 253 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 UBASH3AP57075 661 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 CEBPZQ03701 1054 aaKnown RBP8.82□□□□□ -1
PTPRK-219ENST00000531050 PDCLQ13371 301 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 NAA35Q5VZE5 725 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 NSMCE1Q8WV22 266 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 ATRIPQ8WXE1 791 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 MKL1Q969V6 931 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 ACSBG1Q96GR2 724 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 FANCLQ9NW38 375 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 RGL1Q9NZL6 768 aa8.82□□□□□ -1
PTPRK-219ENST00000531050 NEDD4P46934 1319 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 PES1O00541 588 aaKnown RBP8.81□□□□□ -1
PTPRK-219ENST00000531050 LINGO3P0C6S8 592 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 CSB-PGBD3P0DP91 1061 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 DRP2Q13474 957 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 COL9A3Q14050 684 aaPredicted RBP8.81□□□□□ -1
PTPRK-219ENST00000531050 WHAMMP3Q1A5X7 153 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 C6orf89Q6UWU4 347 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 TC2NQ8N9U0 490 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 DDX54Q8TDD1 881 aaKnown RBP8.81□□□□□ -1
PTPRK-219ENST00000531050 GDAP1L1Q96MZ0 367 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 FTOQ9C0B1 505 aaKnown RBP eCLIP8.81□□□□□ -1
PTPRK-219ENST00000531050 EBF2Q9HAK2 575 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 GOPCQ9HD26 462 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 INTS13Q9NVM9 706 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 HAUS2Q9NVX0 235 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 KIAA1468Q9P260 1216 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 CFAP45Q9UL16 551 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.81□□□□□ -1
PTPRK-219ENST00000531050 DIP2BQ9P265 1576 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 USP14P54578 494 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 MTX1Q13505 466 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 DCTN1Q14203 1278 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 MTF1Q14872 753 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 ARMCX6Q7L4S7 300 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 FMR1NBQ8N0W7 255 aaPredicted RBP8.81□□□□□ -1
PTPRK-219ENST00000531050 FSIP1Q8NA03 581 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 CCDC114Q96M63 670 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 SPAG5Q96R06 1193 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 OSBPL9Q96SU4 736 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 NUP58Q9BVL2 599 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.81□□□□□ -1
PTPRK-219ENST00000531050 MAF1Q9H063 256 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 LZTFL1Q9NQ48 299 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 SPG7Q9UQ90 795 aa8.81□□□□□ -1
PTPRK-219ENST00000531050 GOLGA6BA6NDN3 693 aa8.8□□□□□ -1
PTPRK-219ENST00000531050 OPLAHO14841 1288 aa8.8□□□□□ -1
PTPRK-219ENST00000531050 IKBKBO14920 756 aa8.8□□□□□ -1
PTPRK-219ENST00000531050 CBFA2T2O43439 604 aa8.8□□□□□ -1
PTPRK-219ENST00000531050 PAPOLAP51003 745 aaKnown RBP8.8□□□□□ -1
PTPRK-219ENST00000531050 PIP4K2BP78356 416 aa8.8□□□□□ -1
PTPRK-219ENST00000531050 ROR2Q01974 943 aaKnown RBP8.8□□□□□ -1
PTPRK-219ENST00000531050 SETDB1Q15047 1291 aa8.8□□□□□ -1
PTPRK-219ENST00000531050 SPRED3Q2MJR0 410 aa8.8□□□□□ -1
PTPRK-219ENST00000531050 MYLK4Q86YV6 388 aaPredicted RBP8.8□□□□□ -1
PTPRK-219ENST00000531050 TRIM58Q8NG06 486 aa8.8□□□□□ -1
PTPRK-219ENST00000531050 SMARCC2Q8TAQ2 1214 aa8.8□□□□□ -1
PTPRK-219ENST00000531050 FAM81AQ8TBF8 368 aa8.8□□□□□ -1
PTPRK-219ENST00000531050 ZNF473Q8WTR7 871 aaKnown RBP8.8□□□□□ -1
PTPRK-219ENST00000531050 STAMBPL1Q96FJ0 436 aa8.8□□□□□ -1
PTPRK-219ENST00000531050 ACTR5Q9H9F9 607 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms