RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 IDEP14735 1019 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 PPP1R7Q15435 360 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 MRPL46Q9H2W6 279 aaKnown RBP8.11□□□□□ -1.11
CTNND1-229ENST00000531014 ZKSCAN5Q9Y2L8 839 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 GOLGA6CA6NDK9 693 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 GNAT3A8MTJ3 354 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 GOLGA6DP0CG33 693 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 CUL4BQ13620 913 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 PPP2R5AQ15172 486 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 LARGE2Q8N3Y3 721 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 TMEM57Q8N5G2 664 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 PAWRQ96IZ0 340 aaKnown RBP8.11□□□□□ -1.11
CTNND1-229ENST00000531014 TRIM47Q96LD4 638 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 CDC5LQ99459 802 aaKnown RBP8.11□□□□□ -1.11
CTNND1-229ENST00000531014 ZNF287Q9HBT7 754 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 GOLGA6AQ9NYA3 693 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 PRDM15P57071 1507 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-229ENST00000531014 PLEKHG3A1L390 1219 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 RHOXF2BP0C7M4 288 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 PCYT1AP49585 367 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 TMED1Q13445 227 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 ANKRD20A3Q5VUR7 823 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 POTEAQ6S8J7 498 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 DCPSQ96C86 337 aaKnown RBP8.11□□□□□ -1.11
CTNND1-229ENST00000531014 RHOXF2Q9BQY4 288 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 TCP11L1Q9NUJ3 509 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 RMND1Q9NWS8 449 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 RBM27Q9P2N5 1060 aaKnown RBP8.11□□□□□ -1.11
CTNND1-229ENST00000531014 PNPLA6Q8IY17 1366 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 KIF13AQ9H1H9 1805 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 ARHGEF9O43307 516 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 ARMC9Q7Z3E5 817 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 NUDCD3Q8IVD9 361 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 SIL1Q9H173 461 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 EFCC1Q9HA90 598 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 RIPOR2Q9Y4F9 1068 aa8.11□□□□□ -1.11
CTNND1-229ENST00000531014 CCDC194A0A1B0GVG4 234 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 BAG4O95429 457 aaKnown RBP8.1□□□□□ -1.11
CTNND1-229ENST00000531014 PRIM1P49642 420 aaKnown RBP8.1□□□□□ -1.11
CTNND1-229ENST00000531014 NLRP5P59047 1200 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 CCDC102BQ68D86 513 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 RUFY4Q6ZNE9 571 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 CCDC186Q7Z3E2 898 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 C2CD5Q86YS7 1000 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 SYCP3Q8IZU3 236 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 CCDC26Q8TAB7 109 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 ATP6V0A2Q9Y487 856 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 DAAM1Q9Y4D1 1078 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 KIAA0232Q92628 1395 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 C1orf167Q5SNV9 1468 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 PPFIA4O75335 1185 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 PPP2R3AQ06190 1150 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 RPGRIP1Q96KN7 1286 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 POLE3Q9NRF9 147 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 MRFAP1Q9Y605 127 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 U3KPZ7 1027 aaPredicted RBP8.1□□□□□ -1.11
CTNND1-229ENST00000531014 GAS8O95995 478 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 EEF2P13639 858 aaKnown RBP8.1□□□□□ -1.11
CTNND1-229ENST00000531014 U2AF2P26368 475 aaKnown RBP eCLIP8.1□□□□□ -1.111e-10■■□□□ 14
CTNND1-229ENST00000531014 CCDC93Q567U6 631 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 PPP1R21Q6ZMI0 780 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 SPATS2Q86XZ4 545 aaKnown RBP8.1□□□□□ -1.11
CTNND1-229ENST00000531014 IWS1Q96ST2 819 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 EHMT1Q9H9B1 1298 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 I3L4J1 428 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 SULT6B1Q6IMI4 303 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 PALMDQ9NP74 551 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 DDX21Q9NR30 783 aaKnown RBP eCLIP8.1□□□□□ -1.114e-6■□□□□ 11.2
CTNND1-229ENST00000531014 CTTNBP2NLQ9P2B4 639 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 NSD2O96028 1365 aa8.1□□□□□ -1.11
CTNND1-229ENST00000531014 GOLGA8AA7E2F4 631 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 GOLGA8BA8MQT2 603 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 ESRRGP62508 458 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 SLC15A2Q16348 729 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 RILPL1Q5EBL4 403 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 CWC27Q6UX04 472 aaKnown RBP8.09□□□□□ -1.11
CTNND1-229ENST00000531014 FAM71BQ8TC56 605 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 CSRNP2Q9H175 543 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 RNF181Q9P0P0 153 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 HHATQ5VTY9 493 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 CHD1LQ86WJ1 897 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 PDZD8Q8NEN9 1154 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 GABPB2Q8TAK5 448 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-229ENST00000531014 CUL5Q93034 780 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 ERO1AQ96HE7 468 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 ZNF408Q9H9D4 720 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 ANLNQ9NQW6 1124 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 NUB1Q9Y5A7 615 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 ATP7BP35670 1465 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 AATKQ6ZMQ8 1374 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 CCT4P50991 539 aaKnown RBP8.09□□□□□ -1.11
CTNND1-229ENST00000531014 UAP1Q16222 522 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-229ENST00000531014 TMEM106CQ9BVX2 250 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 DRC3Q9H069 523 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 AFG3L2Q9Y4W6 797 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 CAPN7Q9Y6W3 813 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.09□□□□□ -1.11
CTNND1-229ENST00000531014 FLT4P35916 1363 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 POTEB3A0JP26 581 aa8.09□□□□□ -1.11
CTNND1-229ENST00000531014 GJC1P36383 396 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms