RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 FMR1Q06787 632 aaKnown RBP eCLIP18.45■□□□□ 0.54
CCS-206ENST00000530961 NFIAQ12857 509 aa18.45■□□□□ 0.54
CCS-206ENST00000530961 CST9Q5W186 159 aa18.45■□□□□ 0.54
CCS-206ENST00000530961 DLK2Q6UY11 383 aa18.45■□□□□ 0.54
CCS-206ENST00000530961 TEX11Q8IYF3 940 aa18.45■□□□□ 0.54
CCS-206ENST00000530961 FAM198AQ9UFP1 575 aa18.45■□□□□ 0.54
CCS-206ENST00000530961 ZNF646O15015 1829 aaPredicted RBP18.44■□□□□ 0.54
CCS-206ENST00000530961 TRIM6-TRIM34B2RNG4 842 aa18.44■□□□□ 0.54
CCS-206ENST00000530961 RGS3P49796 1198 aa18.44■□□□□ 0.54
CCS-206ENST00000530961 FKBP1BP68106 108 aa18.44■□□□□ 0.54
CCS-206ENST00000530961 PRAMEF18Q5VWM3 479 aa18.44■□□□□ 0.54
CCS-206ENST00000530961 SH3RF3Q8TEJ3 882 aaPredicted RBP18.44■□□□□ 0.54
CCS-206ENST00000530961 HOOK2Q96ED9 719 aa18.44■□□□□ 0.54
CCS-206ENST00000530961 RIOK1Q9BRS2 568 aaKnown RBP18.44■□□□□ 0.54
CCS-206ENST00000530961 TMEM39BQ9GZU3 492 aa18.44■□□□□ 0.54
CCS-206ENST00000530961 ZNF408Q9H9D4 720 aa18.44■□□□□ 0.54
CCS-206ENST00000530961 CASP8AP2Q9UKL3 1982 aa18.43■□□□□ 0.54
CCS-206ENST00000530961 DLL1O00548 723 aa18.43■□□□□ 0.54
CCS-206ENST00000530961 DYNLL1P63167 89 aaKnown RBP18.43■□□□□ 0.54
CCS-206ENST00000530961 TCP10Q12799 353 aa18.43■□□□□ 0.54
CCS-206ENST00000530961 C2orf69Q8N8R5 385 aa18.43■□□□□ 0.54
CCS-206ENST00000530961 APPBP2Q92624 585 aa18.43■□□□□ 0.54
CCS-206ENST00000530961 TEPSINQ96N21 525 aa18.43■□□□□ 0.54
CCS-206ENST00000530961 TTC22Q5TAA0 569 aa18.42■□□□□ 0.54
CCS-206ENST00000530961 NBPF12Q5TAG4 269 aaPredicted RBP18.42■□□□□ 0.54
CCS-206ENST00000530961 RILPL2Q969X0 211 aa18.42■□□□□ 0.54
CCS-206ENST00000530961 CRNKL1Q9BZJ0 848 aaKnown RBP18.42■□□□□ 0.54
CCS-206ENST00000530961 GBA2Q9HCG7 927 aaPredicted RBP18.42■□□□□ 0.54
CCS-206ENST00000530961 PPP1R12BO60237 982 aaPredicted RBP18.41■□□□□ 0.54
CCS-206ENST00000530961 PICALMQ13492 652 aa18.41■□□□□ 0.54
CCS-206ENST00000530961 SLFNL1Q499Z3 407 aa18.41■□□□□ 0.54
CCS-206ENST00000530961 TGFBRAP1Q8WUH2 860 aa18.41■□□□□ 0.54
CCS-206ENST00000530961 PUS7LQ9H0K6 701 aaKnown RBP18.41■□□□□ 0.54
CCS-206ENST00000530961 DDX4Q9NQI0 724 aaKnown RBP18.41■□□□□ 0.54
CCS-206ENST00000530961 RFX7Q2KHR2 1363 aa18.41■□□□□ 0.54
CCS-206ENST00000530961 RPAP1Q9BWH6 1393 aaPredicted RBP18.41■□□□□ 0.54
CCS-206ENST00000530961 AOC2O75106 756 aa18.4■□□□□ 0.54
CCS-206ENST00000530961 MBD4O95243 580 aa18.4■□□□□ 0.54
CCS-206ENST00000530961 CHGBP05060 677 aa18.4■□□□□ 0.54
CCS-206ENST00000530961 USP5P45974 858 aa18.4■□□□□ 0.54
CCS-206ENST00000530961 ZMYM1Q5SVZ6 1142 aa18.4■□□□□ 0.54
CCS-206ENST00000530961 ARMC9Q7Z3E5 817 aa18.4■□□□□ 0.54
CCS-206ENST00000530961 ZSCAN29Q8IWY8 852 aaPredicted RBP18.4■□□□□ 0.54
CCS-206ENST00000530961 ZFPM1Q8IX07 1006 aa18.4■□□□□ 0.54
CCS-206ENST00000530961 OSBP2Q969R2 916 aa18.4■□□□□ 0.54
CCS-206ENST00000530961 OSBPL5Q9H0X9 879 aaPredicted RBP18.4■□□□□ 0.54
CCS-206ENST00000530961 DHX36Q9H2U1 1008 aaKnown RBP18.4■□□□□ 0.54
CCS-206ENST00000530961 HIP1O00291 1037 aa18.39■□□□□ 0.53
CCS-206ENST00000530961 GSPT1P15170 499 aaKnown RBP18.39■□□□□ 0.53
CCS-206ENST00000530961 SAPCD2Q86UD0 394 aa18.39■□□□□ 0.53
CCS-206ENST00000530961 LCORLQ8N3X6 602 aa18.39■□□□□ 0.53
CCS-206ENST00000530961 ARMT1Q9H993 441 aa18.39■□□□□ 0.53
CCS-206ENST00000530961 TLL2Q9Y6L7 1015 aa18.39■□□□□ 0.53
CCS-206ENST00000530961 UNCXA6NJT0 531 aa18.38■□□□□ 0.53
CCS-206ENST00000530961 TTLL12Q14166 644 aaPredicted RBP18.38■□□□□ 0.53
CCS-206ENST00000530961 MAP3K11Q16584 847 aa18.38■□□□□ 0.53
CCS-206ENST00000530961 DCAF15Q66K64 600 aa18.38■□□□□ 0.53
CCS-206ENST00000530961 MAPKAPK5Q8IW41 473 aa18.38■□□□□ 0.53
CCS-206ENST00000530961 HHIPL1Q96JK4 782 aa18.38■□□□□ 0.53
CCS-206ENST00000530961 CSRNP1Q96S65 589 aa18.38■□□□□ 0.53
CCS-206ENST00000530961 STRBPQ96SI9 672 aaKnown RBP18.38■□□□□ 0.53
CCS-206ENST00000530961 HELLSQ9NRZ9 838 aa18.38■□□□□ 0.53
CCS-206ENST00000530961 ATP8A2Q9NTI2 1148 aa18.38■□□□□ 0.53
CCS-206ENST00000530961 FLT1P17948 1338 aa18.38■□□□□ 0.53
CCS-206ENST00000530961 GNAT2P19087 354 aa18.37■□□□□ 0.53
CCS-206ENST00000530961 SDSP20132 328 aa18.37■□□□□ 0.53
CCS-206ENST00000530961 SH3BP5LQ7L8J4 393 aa18.37■□□□□ 0.53
CCS-206ENST00000530961 CDAN1Q8IWY9 1227 aa18.37■□□□□ 0.53
CCS-206ENST00000530961 DDRGK1Q96HY6 314 aa18.37■□□□□ 0.53
CCS-206ENST00000530961 PI4KBQ9UBF8 816 aa18.37■□□□□ 0.53
CCS-206ENST00000530961 ATRNL1Q5VV63 1379 aa18.37■□□□□ 0.53
CCS-206ENST00000530961 AKAP11Q9UKA4 1901 aa18.37■□□□□ 0.53
CCS-206ENST00000530961 DDTLA6NHG4 134 aaPredicted RBP18.36■□□□□ 0.53
CCS-206ENST00000530961 GPAA1O43292 621 aa18.36■□□□□ 0.53
CCS-206ENST00000530961 IREB2P48200 963 aaKnown RBP18.36■□□□□ 0.53
CCS-206ENST00000530961 HUNKP57058 714 aa18.36■□□□□ 0.53
CCS-206ENST00000530961 MAP3K10Q02779 954 aa18.36■□□□□ 0.53
CCS-206ENST00000530961 SLC4A4Q9Y6R1 1079 aa18.36■□□□□ 0.53
CCS-206ENST00000530961 TBC1D12O60347 775 aa18.35■□□□□ 0.53
CCS-206ENST00000530961 USP2O75604 605 aaPredicted RBP18.35■□□□□ 0.53
CCS-206ENST00000530961 MCMDC2Q4G0Z9 681 aa18.35■□□□□ 0.53
CCS-206ENST00000530961 GIMAP6Q6P9H5 292 aa18.35■□□□□ 0.53
CCS-206ENST00000530961 FOXP4Q8IVH2 680 aaPredicted RBP18.35■□□□□ 0.53
CCS-206ENST00000530961 ZNF341Q9BYN7 854 aa18.35■□□□□ 0.53
CCS-206ENST00000530961 DCP1AQ9NPI6 582 aaPredicted RBP18.35■□□□□ 0.53
CCS-206ENST00000530961 ANGEL1Q9UNK9 670 aaKnown RBP18.35■□□□□ 0.53
CCS-206ENST00000530961 COL2A1P02458 1487 aaPredicted RBP18.34■□□□□ 0.53
CCS-206ENST00000530961 UBE2Q2LH0YL09 131 aa18.34■□□□□ 0.53
CCS-206ENST00000530961 M0R2C6 588 aa18.34■□□□□ 0.53
CCS-206ENST00000530961 PRKAB2O43741 272 aa18.34■□□□□ 0.53
CCS-206ENST00000530961 HLA-DOAP06340 250 aa18.34■□□□□ 0.53
CCS-206ENST00000530961 PRKG1Q13976 671 aa18.34■□□□□ 0.53
CCS-206ENST00000530961 BMP2KLQ5H9B9 411 aa18.34■□□□□ 0.53
CCS-206ENST00000530961 LDLRAD1Q5T700 205 aa18.34■□□□□ 0.53
CCS-206ENST00000530961 MIGA2Q7L4E1 593 aa18.34■□□□□ 0.53
CCS-206ENST00000530961 TTC6Q86TZ1 520 aa18.34■□□□□ 0.53
CCS-206ENST00000530961 SDR42E1Q8WUS8 393 aa18.34■□□□□ 0.53
CCS-206ENST00000530961 SEC62Q99442 399 aaKnown RBP18.34■□□□□ 0.53
CCS-206ENST00000530961 DIAPH3Q9NSV4 1193 aa18.34■□□□□ 0.53
CCS-206ENST00000530961 PALD1Q9ULE6 856 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms