RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 ZNF408Q9H9D4 720 aa13.24□□□□□ -0.29
CAPN1-218ENST00000530442 A0A0D9SFI3 127 aa13.23□□□□□ -0.29
CAPN1-218ENST00000530442 ENTPD3O75355 529 aa13.23□□□□□ -0.29
CAPN1-218ENST00000530442 NPM3O75607 178 aaKnown RBP13.23□□□□□ -0.29
CAPN1-218ENST00000530442 CELF2O95319 508 aaKnown RBP13.23□□□□□ -0.29
CAPN1-218ENST00000530442 ZMYM1Q5SVZ6 1142 aa13.23□□□□□ -0.29
CAPN1-218ENST00000530442 CST9Q5W186 159 aa13.23□□□□□ -0.29
CAPN1-218ENST00000530442 SH3BP5LQ7L8J4 393 aa13.23□□□□□ -0.29
CAPN1-218ENST00000530442 MAPKAPK5Q8IW41 473 aa13.23□□□□□ -0.29
CAPN1-218ENST00000530442 TGFBRAP1Q8WUH2 860 aa13.23□□□□□ -0.29
CAPN1-218ENST00000530442 FAM151AQ8WW52 585 aa13.23□□□□□ -0.29
CAPN1-218ENST00000530442 SEC62Q99442 399 aaKnown RBP13.23□□□□□ -0.29
CAPN1-218ENST00000530442 OSBPL5Q9H0X9 879 aaPredicted RBP13.23□□□□□ -0.29
CAPN1-218ENST00000530442 GPAA1O43292 621 aa13.22□□□□□ -0.29
CAPN1-218ENST00000530442 APLP1P51693 650 aa13.22□□□□□ -0.29
CAPN1-218ENST00000530442 NBPF12Q5TAG4 269 aaPredicted RBP13.22□□□□□ -0.29
CAPN1-218ENST00000530442 TICAM2Q86XR7 235 aa13.22□□□□□ -0.29
CAPN1-218ENST00000530442 SDR42E1Q8WUS8 393 aa13.22□□□□□ -0.29
CAPN1-218ENST00000530442 AIDAQ96BJ3 306 aa13.22□□□□□ -0.29
CAPN1-218ENST00000530442 FAM227BQ96M60 508 aa13.22□□□□□ -0.29
CAPN1-218ENST00000530442 ATAD5Q96QE3 1844 aa13.22□□□□□ -0.29
CAPN1-218ENST00000530442 MYH8P13535 1937 aa13.21□□□□□ -0.29
CAPN1-218ENST00000530442 LAMA4Q16363 1823 aa13.21□□□□□ -0.29
CAPN1-218ENST00000530442 DDTLA6NHG4 134 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-218ENST00000530442 PRKAB2O43741 272 aa13.21□□□□□ -0.29
CAPN1-218ENST00000530442 NMIQ13287 307 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-218ENST00000530442 BMP2KLQ5H9B9 411 aa13.21□□□□□ -0.29
CAPN1-218ENST00000530442 CCDC129Q6ZRS4 1044 aa13.21□□□□□ -0.29
CAPN1-218ENST00000530442 STRBPQ96SI9 672 aaKnown RBP13.21□□□□□ -0.29
CAPN1-218ENST00000530442 CRNKL1Q9BZJ0 848 aaKnown RBP13.21□□□□□ -0.29
CAPN1-218ENST00000530442 MKRN1Q9UHC7 482 aaKnown RBP13.21□□□□□ -0.29
CAPN1-218ENST00000530442 FZD1Q9UP38 647 aa13.21□□□□□ -0.29
CAPN1-218ENST00000530442 DOCK1Q14185 1865 aa13.21□□□□□ -0.3
CAPN1-218ENST00000530442 TMEM88BA6NKF7 163 aa13.2□□□□□ -0.3
CAPN1-218ENST00000530442 HSPA6P17066 643 aa13.2□□□□□ -0.3
CAPN1-218ENST00000530442 USP5P45974 858 aa13.2□□□□□ -0.3
CAPN1-218ENST00000530442 ZNF589Q86UQ0 364 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-218ENST00000530442 GBA2Q9HCG7 927 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-218ENST00000530442 HELLSQ9NRZ9 838 aa13.2□□□□□ -0.3
CAPN1-218ENST00000530442 CEP350Q5VT06 3117 aa13.19□□□□□ -0.3
CAPN1-218ENST00000530442 FOXP2O15409 715 aa13.19□□□□□ -0.3
CAPN1-218ENST00000530442 SLURP2P0DP57 97 aa13.19□□□□□ -0.3
CAPN1-218ENST00000530442 NF2P35240 595 aa13.19□□□□□ -0.3
CAPN1-218ENST00000530442 MOB2Q70IA6 237 aa13.19□□□□□ -0.3
CAPN1-218ENST00000530442 ZSCAN29Q8IWY8 852 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-218ENST00000530442 CSRNP1Q96S65 589 aa13.19□□□□□ -0.3
CAPN1-218ENST00000530442 IL25Q9H293 177 aa13.19□□□□□ -0.3
CAPN1-218ENST00000530442 EPB41L4AQ9HCS5 686 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-218ENST00000530442 DCP1AQ9NPI6 582 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-218ENST00000530442 CREBZFQ9NS37 354 aa13.19□□□□□ -0.3
CAPN1-218ENST00000530442 DIAPH3Q9NSV4 1193 aa13.19□□□□□ -0.3
CAPN1-218ENST00000530442 SAP30BPQ9UHR5 308 aaKnown RBP13.19□□□□□ -0.3
CAPN1-218ENST00000530442 GTF3C3Q9Y5Q9 886 aa13.19□□□□□ -0.3
CAPN1-218ENST00000530442 SLC4A4Q9Y6R1 1079 aa13.19□□□□□ -0.3
CAPN1-218ENST00000530442 THSD7BQ9C0I4 1608 aa13.19□□□□□ -0.3
CAPN1-218ENST00000530442 HIP1O00291 1037 aa13.18□□□□□ -0.3
CAPN1-218ENST00000530442 HTRA3P83110 453 aa13.18□□□□□ -0.3
CAPN1-218ENST00000530442 EVX2Q03828 476 aa13.18□□□□□ -0.3
CAPN1-218ENST00000530442 PRKG1Q13976 671 aa13.18□□□□□ -0.3
CAPN1-218ENST00000530442 SLC4A8Q2Y0W8 1093 aa13.18□□□□□ -0.3
CAPN1-218ENST00000530442 SUPT20HL1Q3ZLR7 823 aa13.18□□□□□ -0.3
CAPN1-218ENST00000530442 MCMDC2Q4G0Z9 681 aa13.18□□□□□ -0.3
CAPN1-218ENST00000530442 CWC27Q6UX04 472 aaKnown RBP13.18□□□□□ -0.3
CAPN1-218ENST00000530442 PALD1Q9ULE6 856 aa13.18□□□□□ -0.3
CAPN1-218ENST00000530442 TLL2Q9Y6L7 1015 aa13.18□□□□□ -0.3
CAPN1-218ENST00000530442 CCDC171Q6TFL3 1326 aa13.17□□□□□ -0.3
CAPN1-218ENST00000530442 GSG1L2A8MUP6 293 aa13.17□□□□□ -0.3
CAPN1-218ENST00000530442 GNAT2P19087 354 aa13.17□□□□□ -0.3
CAPN1-218ENST00000530442 CHMLP26374 656 aa13.17□□□□□ -0.3
CAPN1-218ENST00000530442 FKBP1BP68106 108 aa13.17□□□□□ -0.3
CAPN1-218ENST00000530442 MAP3K11Q16584 847 aa13.17□□□□□ -0.3
CAPN1-218ENST00000530442 VPS53Q5VIR6 699 aa13.17□□□□□ -0.3
CAPN1-218ENST00000530442 SAPCD2Q86UD0 394 aa13.17□□□□□ -0.3
CAPN1-218ENST00000530442 DHX36Q9H2U1 1008 aaKnown RBP13.17□□□□□ -0.3
CAPN1-218ENST00000530442 DNAJC18Q9H819 358 aa13.17□□□□□ -0.3
CAPN1-218ENST00000530442 ATP8A2Q9NTI2 1148 aa13.17□□□□□ -0.3
CAPN1-218ENST00000530442 MCM9Q9NXL9 1143 aa13.17□□□□□ -0.3
CAPN1-218ENST00000530442 ANGEL1Q9UNK9 670 aaKnown RBP13.17□□□□□ -0.3
CAPN1-218ENST00000530442 PHIPQ8WWQ0 1821 aa13.17□□□□□ -0.3
CAPN1-218ENST00000530442 RAD50Q92878 1312 aa13.16□□□□□ -0.3
CAPN1-218ENST00000530442 FAM196BA6NMK8 535 aa13.16□□□□□ -0.3
CAPN1-218ENST00000530442 USP2O75604 605 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-218ENST00000530442 CYP2D6P10635 497 aa13.16□□□□□ -0.3
CAPN1-218ENST00000530442 TTLL12Q14166 644 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-218ENST00000530442 DCAF15Q66K64 600 aa13.16□□□□□ -0.3
CAPN1-218ENST00000530442 MIGA2Q7L4E1 593 aa13.16□□□□□ -0.3
CAPN1-218ENST00000530442 C2orf69Q8N8R5 385 aa13.16□□□□□ -0.3
CAPN1-218ENST00000530442 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.16□□□□□ -0.3
CAPN1-218ENST00000530442 HOOK2Q96ED9 719 aa13.16□□□□□ -0.3
CAPN1-218ENST00000530442 ABT1Q9ULW3 272 aaKnown RBP13.16□□□□□ -0.3
CAPN1-218ENST00000530442 PATL2C9JE40 543 aaKnown RBP13.15□□□□□ -0.3
CAPN1-218ENST00000530442 SMIM22K7EJ46 135 aa13.15□□□□□ -0.3
CAPN1-218ENST00000530442 PPP1R12BO60237 982 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-218ENST00000530442 HLA-DOAP06340 250 aa13.15□□□□□ -0.3
CAPN1-218ENST00000530442 PLCD1P51178 756 aa13.15□□□□□ -0.3
CAPN1-218ENST00000530442 HUNKP57058 714 aa13.15□□□□□ -0.3
CAPN1-218ENST00000530442 MAP3K10Q02779 954 aa13.15□□□□□ -0.3
CAPN1-218ENST00000530442 ARMC9Q7Z3E5 817 aa13.15□□□□□ -0.3
CAPN1-218ENST00000530442 KLRG1Q96E93 195 aa13.15□□□□□ -0.3
CAPN1-218ENST00000530442 ZNF341Q9BYN7 854 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms