RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 TDRD12Q587J7 1177 aaKnown RBP14.1□□□□□ -0.15
SCN3B-206ENST00000530277 ZNF622Q969S3 477 aaKnown RBP eCLIP14.1□□□□□ -0.15
SCN3B-206ENST00000530277 CEP89Q96ST8 783 aa14.1□□□□□ -0.15
SCN3B-206ENST00000530277 PIH1D3Q9NQM4 214 aaKnown RBP14.1□□□□□ -0.15
SCN3B-206ENST00000530277 ADAMTS13Q76LX8 1427 aa14.1□□□□□ -0.15
SCN3B-206ENST00000530277 PDE8BO95263 885 aa14.1□□□□□ -0.15
SCN3B-206ENST00000530277 SLU7O95391 586 aaKnown RBP14.1□□□□□ -0.15
SCN3B-206ENST00000530277 CASP1P29466 404 aa14.1□□□□□ -0.15
SCN3B-206ENST00000530277 CCDC150Q8NCX0 1101 aa14.1□□□□□ -0.15
SCN3B-206ENST00000530277 MCAMP43121 646 aa14.09□□□□□ -0.15
SCN3B-206ENST00000530277 RESTQ13127 1097 aa14.09□□□□□ -0.15
SCN3B-206ENST00000530277 MYO1BO43795 1136 aa14.09□□□□□ -0.15
SCN3B-206ENST00000530277 RHOXF2BP0C7M4 288 aa14.09□□□□□ -0.15
SCN3B-206ENST00000530277 DYNLL1P63167 89 aaKnown RBP14.09□□□□□ -0.15
SCN3B-206ENST00000530277 CCDC181Q5TID7 509 aa14.09□□□□□ -0.15
SCN3B-206ENST00000530277 CAPZA3Q96KX2 299 aa14.09□□□□□ -0.15
SCN3B-206ENST00000530277 RHOXF2Q9BQY4 288 aa14.09□□□□□ -0.15
SCN3B-206ENST00000530277 CTDP1Q9Y5B0 961 aaPredicted RBP14.09□□□□□ -0.15
SCN3B-206ENST00000530277 CARMIL3Q8ND23 1372 aa14.09□□□□□ -0.15
SCN3B-206ENST00000530277 TRIM21P19474 475 aaKnown RBP14.09□□□□□ -0.15
SCN3B-206ENST00000530277 AKNAD1Q5T1N1 836 aa14.09□□□□□ -0.15
SCN3B-206ENST00000530277 ADALQ6DHV7 355 aa14.09□□□□□ -0.15
SCN3B-206ENST00000530277 AK7Q96M32 723 aa14.09□□□□□ -0.15
SCN3B-206ENST00000530277 CARD6Q9BX69 1037 aa14.09□□□□□ -0.15
SCN3B-206ENST00000530277 ELP1O95163 1332 aa14.09□□□□□ -0.15
SCN3B-206ENST00000530277 FRMPD1Q5SYB0 1578 aa14.09□□□□□ -0.15
SCN3B-206ENST00000530277 RPAP1Q9BWH6 1393 aaPredicted RBP14.09□□□□□ -0.15
SCN3B-206ENST00000530277 GOLGA8HP0CJ92 632 aa14.08□□□□□ -0.15
SCN3B-206ENST00000530277 LETM2Q2VYF4 491 aa14.08□□□□□ -0.15
SCN3B-206ENST00000530277 MMRN2Q9H8L6 949 aa14.08□□□□□ -0.15
SCN3B-206ENST00000530277 GUCA1BQ9UMX6 200 aa14.08□□□□□ -0.15
SCN3B-206ENST00000530277 PCDHA5Q9Y5H7 936 aa14.08□□□□□ -0.15
SCN3B-206ENST00000530277 CLTCQ00610 1675 aaKnown RBP14.08□□□□□ -0.15
SCN3B-206ENST00000530277 ERCC6LQ2NKX8 1250 aa14.08□□□□□ -0.16
SCN3B-206ENST00000530277 APOA5Q6Q788 366 aa14.08□□□□□ -0.16
SCN3B-206ENST00000530277 USP31Q70CQ4 1352 aa14.08□□□□□ -0.16
SCN3B-206ENST00000530277 ERVV-2B6SEH9 535 aa14.08□□□□□ -0.16
SCN3B-206ENST00000530277 NAPAP54920 295 aa14.08□□□□□ -0.16
SCN3B-206ENST00000530277 RAD51AP2Q09MP3 1159 aa14.08□□□□□ -0.16
SCN3B-206ENST00000530277 ZFYVE27Q5T4F4 411 aa14.08□□□□□ -0.16
SCN3B-206ENST00000530277 ZNF274Q96GC6 653 aaPredicted RBP14.08□□□□□ -0.16
SCN3B-206ENST00000530277 GOLPH3LQ9H4A5 285 aa14.08□□□□□ -0.16
SCN3B-206ENST00000530277 TCP11L1Q9NUJ3 509 aa14.08□□□□□ -0.16
SCN3B-206ENST00000530277 ZNF335Q9H4Z2 1342 aaPredicted RBP14.08□□□□□ -0.16
SCN3B-206ENST00000530277 ZNF76P36508 570 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 ASIC1P78348 528 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 GIGYF2Q6Y7W6 1299 aaKnown RBP14.07□□□□□ -0.16
SCN3B-206ENST00000530277 CACNA2D4Q7Z3S7 1137 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 ZNF654Q8IZM8 581 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 RASGRP4Q8TDF6 673 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 ZSWIM5Q9P217 1185 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 MYOM1P52179 1685 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 KRT2P35908 639 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 TCERG1LQ5VWI1 586 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 NLRP10Q86W26 655 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 MAPKAPK5Q8IW41 473 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 CDC42BPGQ6DT37 1551 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 PCCAP05165 728 aaPredicted RBP14.07□□□□□ -0.16
SCN3B-206ENST00000530277 KIF5BP33176 963 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 ZNF569Q5MCW4 686 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 JAKMIP3Q5VZ66 844 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 LCORLQ8N3X6 602 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 KIAA1524Q8TCG1 905 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 GPKOWQ92917 476 aaPredicted RBP eCLIP14.07□□□□□ -0.16
SCN3B-206ENST00000530277 CTNND2Q9UQB3 1225 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 TNKSO95271 1327 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 UBE2Q2LH0YL09 131 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 H7C1W4 665 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 KIF2AO00139 706 aaPredicted RBP14.07□□□□□ -0.16
SCN3B-206ENST00000530277 PDIA6Q15084 440 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 CCDC144BQ3MJ40 725 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 GDAP1L1Q96MZ0 367 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 GPR101Q96P66 508 aaPredicted RBP14.07□□□□□ -0.16
SCN3B-206ENST00000530277 PSMB7Q99436 277 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 BAG1Q99933 345 aaPredicted RBP14.07□□□□□ -0.16
SCN3B-206ENST00000530277 CCDC94Q9BW85 323 aaPredicted RBP14.07□□□□□ -0.16
SCN3B-206ENST00000530277 JADE2Q9NQC1 790 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 CCDC87Q9NVE4 849 aa14.07□□□□□ -0.16
SCN3B-206ENST00000530277 TNNI2P48788 182 aa14.06□□□□□ -0.16
SCN3B-206ENST00000530277 LRRC8AQ8IWT6 810 aa14.06□□□□□ -0.16
SCN3B-206ENST00000530277 TTLL11Q8NHH1 800 aa14.06□□□□□ -0.16
SCN3B-206ENST00000530277 TMEM87BQ96K49 555 aa14.06□□□□□ -0.16
SCN3B-206ENST00000530277 PLEKHA4Q9H4M7 779 aa14.06□□□□□ -0.16
SCN3B-206ENST00000530277 TMTC2Q8N394 836 aa14.06□□□□□ -0.16
SCN3B-206ENST00000530277 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.06□□□□□ -0.16
SCN3B-206ENST00000530277 TAB2Q9NYJ8 693 aa14.06□□□□□ -0.16
SCN3B-206ENST00000530277 HEG1Q9ULI3 1381 aa14.06□□□□□ -0.16
SCN3B-206ENST00000530277 MAP3K15Q6ZN16 1313 aa14.06□□□□□ -0.16
SCN3B-206ENST00000530277 CHRNDQ07001 517 aa14.06□□□□□ -0.16
SCN3B-206ENST00000530277 NRKQ7Z2Y5 1582 aa14.05□□□□□ -0.16
SCN3B-206ENST00000530277 RASGRF1Q13972 1273 aa14.05□□□□□ -0.16
SCN3B-206ENST00000530277 TBC1D10CQ8IV04 446 aa14.05□□□□□ -0.16
SCN3B-206ENST00000530277 PDLIM2Q96JY6 352 aa14.05□□□□□ -0.16
SCN3B-206ENST00000530277 BAG3O95817 575 aa14.05□□□□□ -0.16
SCN3B-206ENST00000530277 UBXN1Q04323 297 aa14.05□□□□□ -0.16
SCN3B-206ENST00000530277 IGSF22Q8N9C0 903 aa14.05□□□□□ -0.16
SCN3B-206ENST00000530277 LINC00301Q8NCQ3 95 aa14.05□□□□□ -0.16
SCN3B-206ENST00000530277 NLRP12P59046 1061 aa14.05□□□□□ -0.16
SCN3B-206ENST00000530277 PPARAQ07869 468 aa14.05□□□□□ -0.16
SCN3B-206ENST00000530277 POSTNQ15063 836 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms