RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 HDLBPQ00341 1268 aaKnown RBP19.64■□□□□ 0.73
PACS1-209ENST00000529757 CHST3Q7LGC8 479 aa19.64■□□□□ 0.73
PACS1-209ENST00000529757 FBXL16Q8N461 479 aa19.64■□□□□ 0.73
PACS1-209ENST00000529757 TGFBRAP1Q8WUH2 860 aa19.64■□□□□ 0.73
PACS1-209ENST00000529757 AGXT2Q9BYV1 514 aa19.64■□□□□ 0.73
PACS1-209ENST00000529757 MCM9Q9NXL9 1143 aa19.64■□□□□ 0.73
PACS1-209ENST00000529757 MKRN1Q9UHC7 482 aaKnown RBP19.64■□□□□ 0.73
PACS1-209ENST00000529757 MYO3BQ8WXR4 1341 aa19.64■□□□□ 0.73
PACS1-209ENST00000529757 LTBP3Q9NS15 1303 aa19.64■□□□□ 0.73
PACS1-209ENST00000529757 CYP2D7A0A087X1C5 515 aa19.63■□□□□ 0.73
PACS1-209ENST00000529757 B4E1Z4 1266 aa19.63■□□□□ 0.73
PACS1-209ENST00000529757 LARGE1O95461 756 aa19.63■□□□□ 0.73
PACS1-209ENST00000529757 CRKP46108 304 aa19.63■□□□□ 0.73
PACS1-209ENST00000529757 BRF1Q92994 677 aa19.63■□□□□ 0.73
PACS1-209ENST00000529757 CHMP5Q9NZZ3 219 aa19.63■□□□□ 0.73
PACS1-209ENST00000529757 LAMB1P07942 1786 aa19.62■□□□□ 0.73
PACS1-209ENST00000529757 PCP11498 1178 aaKnown RBP19.62■□□□□ 0.73
PACS1-209ENST00000529757 ANTXR2P58335 489 aa19.62■□□□□ 0.73
PACS1-209ENST00000529757 ME3Q16798 604 aa19.62■□□□□ 0.73
PACS1-209ENST00000529757 RSBN1LQ6PCB5 846 aaPredicted RBP19.62■□□□□ 0.73
PACS1-209ENST00000529757 AMOTL1Q8IY63 956 aa19.62■□□□□ 0.73
PACS1-209ENST00000529757 CWC22Q9HCG8 908 aaKnown RBP19.62■□□□□ 0.73
PACS1-209ENST00000529757 INCENPQ9NQS7 918 aa19.62■□□□□ 0.73
PACS1-209ENST00000529757 CIZ1Q9ULV3 898 aaPredicted RBP19.62■□□□□ 0.73
PACS1-209ENST00000529757 TACC3Q9Y6A5 838 aa19.62■□□□□ 0.73
PACS1-209ENST00000529757 ARFGEF1Q9Y6D6 1849 aa19.62■□□□□ 0.73
PACS1-209ENST00000529757 NAV1Q8NEY1 1877 aa19.62■□□□□ 0.73
PACS1-209ENST00000529757 RAD17O75943 681 aa19.62■□□□□ 0.73
PACS1-209ENST00000529757 SLC3A2P08195 630 aaKnown RBP19.62■□□□□ 0.73
PACS1-209ENST00000529757 MAPKAPK5Q8IW41 473 aa19.62■□□□□ 0.73
PACS1-209ENST00000529757 JDP2Q8WYK2 163 aa19.62■□□□□ 0.73
PACS1-209ENST00000529757 ZDHHC15Q96MV8 337 aa19.62■□□□□ 0.73
PACS1-209ENST00000529757 FHDC1Q9C0D6 1143 aaPredicted RBP19.62■□□□□ 0.73
PACS1-209ENST00000529757 TOMM22Q9NS69 142 aa19.62■□□□□ 0.73
PACS1-209ENST00000529757 PSMD14O00487 310 aa19.61■□□□□ 0.73
PACS1-209ENST00000529757 VIL1P09327 827 aaKnown RBP19.61■□□□□ 0.73
PACS1-209ENST00000529757 USP17L8P0C7I0 530 aa19.61■□□□□ 0.73
PACS1-209ENST00000529757 RRP12Q5JTH9 1297 aaKnown RBP19.61■□□□□ 0.73
PACS1-209ENST00000529757 CYB5R4Q7L1T6 521 aa19.61■□□□□ 0.73
PACS1-209ENST00000529757 STK11IPQ8N1F8 1099 aa19.61■□□□□ 0.73
PACS1-209ENST00000529757 SERPINA10Q9UK55 444 aa19.61■□□□□ 0.73
PACS1-209ENST00000529757 FLT1P17948 1338 aa19.61■□□□□ 0.73
PACS1-209ENST00000529757 ADAMTSL1Q8N6G6 1762 aa19.6■□□□□ 0.73
PACS1-209ENST00000529757 KDM4AO75164 1064 aa19.6■□□□□ 0.73
PACS1-209ENST00000529757 CYP2D6P10635 497 aa19.6■□□□□ 0.73
PACS1-209ENST00000529757 C12orf60Q5U649 245 aa19.6■□□□□ 0.73
PACS1-209ENST00000529757 APOBEC3HQ6NTF7 200 aaKnown RBP19.6■□□□□ 0.73
PACS1-209ENST00000529757 USP40Q9NVE5 1235 aa19.6■□□□□ 0.73
PACS1-209ENST00000529757 CDK5RAP2Q96SN8 1893 aa19.6■□□□□ 0.73
PACS1-209ENST00000529757 SMIM22K7EJ46 135 aa19.59■□□□□ 0.73
PACS1-209ENST00000529757 FGRP09769 529 aa19.59■□□□□ 0.73
PACS1-209ENST00000529757 CCDC83Q8IWF9 413 aa19.59■□□□□ 0.73
PACS1-209ENST00000529757 NKX2-3Q8TAU0 364 aa19.59■□□□□ 0.73
PACS1-209ENST00000529757 TMEM87BQ96K49 555 aa19.59■□□□□ 0.73
PACS1-209ENST00000529757 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.59■□□□□ 0.73
PACS1-209ENST00000529757 POLR3DP05423 398 aaPredicted RBP19.59■□□□□ 0.73
PACS1-209ENST00000529757 RBM5P52756 815 aaKnown RBP eCLIP19.59■□□□□ 0.73
PACS1-209ENST00000529757 APOBRQ0VD83 1088 aa19.59■□□□□ 0.73
PACS1-209ENST00000529757 CDC42EP5Q6NZY7 148 aa19.59■□□□□ 0.73
PACS1-209ENST00000529757 NECAB1Q8N987 351 aa19.59■□□□□ 0.73
PACS1-209ENST00000529757 ESR2Q92731 530 aa19.59■□□□□ 0.73
PACS1-209ENST00000529757 ZSWIM5Q9P217 1185 aa19.59■□□□□ 0.73
PACS1-209ENST00000529757 ROBO3Q96MS0 1386 aa19.58■□□□□ 0.72
PACS1-209ENST00000529757 DDX60LQ5H9U9 1706 aaKnown RBP19.58■□□□□ 0.72
PACS1-209ENST00000529757 RASSF7Q02833 373 aa19.58■□□□□ 0.72
PACS1-209ENST00000529757 PDE4BQ07343 736 aa19.58■□□□□ 0.72
PACS1-209ENST00000529757 GMLQ99445 158 aa19.58■□□□□ 0.72
PACS1-209ENST00000529757 GPHNQ9NQX3 736 aaPredicted RBP19.58■□□□□ 0.72
PACS1-209ENST00000529757 SAP30BPQ9UHR5 308 aaKnown RBP19.58■□□□□ 0.72
PACS1-209ENST00000529757 ANGEL1Q9UNK9 670 aaKnown RBP19.58■□□□□ 0.72
PACS1-209ENST00000529757 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.58■□□□□ 0.72
PACS1-209ENST00000529757 FOCADQ5VW36 1801 aa19.58■□□□□ 0.72
PACS1-209ENST00000529757 SH2B2O14492 632 aaPredicted RBP19.57■□□□□ 0.72
PACS1-209ENST00000529757 ORC4O43929 436 aa19.57■□□□□ 0.72
PACS1-209ENST00000529757 WDHD1O75717 1129 aaPredicted RBP19.57■□□□□ 0.72
PACS1-209ENST00000529757 EVCP57679 992 aa19.57■□□□□ 0.72
PACS1-209ENST00000529757 EVX2Q03828 476 aa19.57■□□□□ 0.72
PACS1-209ENST00000529757 CXCL9Q07325 125 aa19.57■□□□□ 0.72
PACS1-209ENST00000529757 ST3GAL1Q11201 340 aa19.57■□□□□ 0.72
PACS1-209ENST00000529757 STK3Q13188 491 aa19.57■□□□□ 0.72
PACS1-209ENST00000529757 ZNF274Q96GC6 653 aaPredicted RBP19.57■□□□□ 0.72
PACS1-209ENST00000529757 MTA3Q9BTC8 594 aa19.57■□□□□ 0.72
PACS1-209ENST00000529757 HDAC9Q9UKV0 1011 aa19.57■□□□□ 0.72
PACS1-209ENST00000529757 PFKFB2O60825 505 aa19.56■□□□□ 0.72
PACS1-209ENST00000529757 SART3Q15020 963 aaKnown RBP19.56■□□□□ 0.72
PACS1-209ENST00000529757 SLC4A8Q2Y0W8 1093 aa19.56■□□□□ 0.72
PACS1-209ENST00000529757 CIAPIN1Q6FI81 312 aa19.56■□□□□ 0.72
PACS1-209ENST00000529757 AGBL3Q8NEM8 1001 aa19.56■□□□□ 0.72
PACS1-209ENST00000529757 GTF3C6Q969F1 213 aa19.56■□□□□ 0.72
PACS1-209ENST00000529757 IFIT3O14879 490 aaKnown RBP19.56■□□□□ 0.72
PACS1-209ENST00000529757 NT5C2P49902 561 aa19.56■□□□□ 0.72
PACS1-209ENST00000529757 PICALMQ13492 652 aa19.56■□□□□ 0.72
PACS1-209ENST00000529757 CFAP100Q494V2 611 aa19.56■□□□□ 0.72
PACS1-209ENST00000529757 TMEM67Q5HYA8 995 aa19.56■□□□□ 0.72
PACS1-209ENST00000529757 IGDCC4Q8TDY8 1250 aa19.56■□□□□ 0.72
PACS1-209ENST00000529757 SMC3Q9UQE7 1217 aa19.56■□□□□ 0.72
PACS1-209ENST00000529757 PCDHAC2Q9Y5I4 1007 aa19.56■□□□□ 0.72
PACS1-209ENST00000529757 RANBP6O60518 1105 aaKnown RBP19.55■□□□□ 0.72
PACS1-209ENST00000529757 PRDM1O75626 825 aa19.55■□□□□ 0.72
PACS1-209ENST00000529757 TNIP1Q15025 636 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms