RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 ATG3Q9NT62 314 aa7.75□□□□□ -1.17
C11orf88-204ENST00000529661 VTI1BQ9UEU0 232 aa7.75□□□□□ -1.17
C11orf88-204ENST00000529661 PRKAG2Q9UGJ0 569 aa7.75□□□□□ -1.17
C11orf88-204ENST00000529661 CSADQ9Y600 493 aa7.75□□□□□ -1.17
C11orf88-204ENST00000529661 DYNC1LI2O43237 492 aaPredicted RBP7.74□□□□□ -1.17
C11orf88-204ENST00000529661 HYAL3O43820 417 aaPredicted RBP7.74□□□□□ -1.17
C11orf88-204ENST00000529661 SORBS3O60504 671 aa7.74□□□□□ -1.17
C11orf88-204ENST00000529661 RNGTTO60942 597 aaKnown RBP7.74□□□□□ -1.17
C11orf88-204ENST00000529661 TRIM37O94972 964 aa7.74□□□□□ -1.17
C11orf88-204ENST00000529661 HCLS1P14317 486 aaPredicted RBP7.74□□□□□ -1.17
C11orf88-204ENST00000529661 SSTR4P31391 388 aa7.74□□□□□ -1.17
C11orf88-204ENST00000529661 TTLL4Q14679 1199 aa7.74□□□□□ -1.17
C11orf88-204ENST00000529661 TTBK2Q6IQ55 1244 aa7.74□□□□□ -1.17
C11orf88-204ENST00000529661 GIMAP7Q8NHV1 300 aa7.74□□□□□ -1.17
C11orf88-204ENST00000529661 GIPC2Q8TF65 315 aa7.74□□□□□ -1.17
C11orf88-204ENST00000529661 PCDHA4Q9UN74 947 aa7.74□□□□□ -1.17
C11orf88-204ENST00000529661 CYP8B1Q9UNU6 501 aa7.74□□□□□ -1.17
C11orf88-204ENST00000529661 RBM47A0AV96 593 aaKnown RBP7.73□□□□□ -1.17
C11orf88-204ENST00000529661 F13BP05160 661 aa7.73□□□□□ -1.17
C11orf88-204ENST00000529661 LMNB1P20700 586 aa7.73□□□□□ -1.17
C11orf88-204ENST00000529661 ADMP35318 185 aa7.73□□□□□ -1.17
C11orf88-204ENST00000529661 ZC3H12AQ5D1E8 599 aaKnown RBP7.73□□□□□ -1.17
C11orf88-204ENST00000529661 SMYD4Q8IYR2 804 aaPredicted RBP7.73□□□□□ -1.17
C11orf88-204ENST00000529661 SHISA5Q8N114 240 aa7.73□□□□□ -1.17
C11orf88-204ENST00000529661 OSBPL1AQ9BXW6 950 aa7.73□□□□□ -1.17
C11orf88-204ENST00000529661 SSU72Q9NP77 194 aaKnown RBP7.73□□□□□ -1.17
C11orf88-204ENST00000529661 PICK1Q9NRD5 415 aa7.73□□□□□ -1.17
C11orf88-204ENST00000529661 DCDC2CA8MYV0 355 aa7.72□□□□□ -1.17
C11orf88-204ENST00000529661 CTSHP09668 335 aa7.72□□□□□ -1.17
C11orf88-204ENST00000529661 RBM25P49756 843 aaKnown RBP7.72□□□□□ -1.17
C11orf88-204ENST00000529661 ERVK-24P63145 666 aa7.72□□□□□ -1.17
C11orf88-204ENST00000529661 ZAR1Q86SH2 424 aa7.72□□□□□ -1.17
C11orf88-204ENST00000529661 PCMTD2Q9NV79 361 aa7.72□□□□□ -1.17
C11orf88-204ENST00000529661 CACNA2D2Q9NY47 1150 aa7.72□□□□□ -1.17
C11orf88-204ENST00000529661 PRR19A6NJB7 356 aa7.71□□□□□ -1.18
C11orf88-204ENST00000529661 FAM170BA6NMN3 283 aa7.71□□□□□ -1.18
C11orf88-204ENST00000529661 COBLO75128 1261 aa7.71□□□□□ -1.18
C11orf88-204ENST00000529661 GRIK1P39086 918 aa7.71□□□□□ -1.18
C11orf88-204ENST00000529661 TAF1CQ15572 869 aaPredicted RBP7.71□□□□□ -1.18
C11orf88-204ENST00000529661 PPM1JQ5JR12 505 aa7.71□□□□□ -1.18
C11orf88-204ENST00000529661 CRELD1Q96HD1 420 aa7.71□□□□□ -1.18
C11orf88-204ENST00000529661 LEMD3Q9Y2U8 911 aa7.71□□□□□ -1.18
C11orf88-204ENST00000529661 NEFMP07197 916 aa7.7□□□□□ -1.18
C11orf88-204ENST00000529661 PTPN11Q06124 597 aaPredicted RBP7.7□□□□□ -1.18
C11orf88-204ENST00000529661 CDK5R2Q13319 367 aa7.7□□□□□ -1.18
C11orf88-204ENST00000529661 ZNF326Q5BKZ1 582 aaKnown RBP7.7□□□□□ -1.18
C11orf88-204ENST00000529661 C12orf40Q86WS4 652 aa7.7□□□□□ -1.18
C11orf88-204ENST00000529661 ISL2Q96A47 359 aa7.7□□□□□ -1.18
C11orf88-204ENST00000529661 ELMO3Q96BJ8 720 aa7.7□□□□□ -1.18
C11orf88-204ENST00000529661 METTL22Q9BUU2 404 aaPredicted RBP7.7□□□□□ -1.18
C11orf88-204ENST00000529661 C1GALT1Q9NS00 363 aa7.7□□□□□ -1.18
C11orf88-204ENST00000529661 PIM2Q9P1W9 311 aa7.7□□□□□ -1.18
C11orf88-204ENST00000529661 E9PSI1 815 aa7.69□□□□□ -1.18
C11orf88-204ENST00000529661 CD97P48960 835 aa7.69□□□□□ -1.18
C11orf88-204ENST00000529661 LIG3P49916 1009 aa7.69□□□□□ -1.18
C11orf88-204ENST00000529661 SEPT6Q14141 434 aa7.69□□□□□ -1.18
C11orf88-204ENST00000529661 SEZ6L2Q6UXD5 910 aa7.69□□□□□ -1.18
C11orf88-204ENST00000529661 RNF214Q8ND24 703 aa7.69□□□□□ -1.18
C11orf88-204ENST00000529661 GATA6Q92908 595 aa7.69□□□□□ -1.18
C11orf88-204ENST00000529661 GAL3ST3Q96A11 431 aa7.69□□□□□ -1.18
C11orf88-204ENST00000529661 PRAMEF27A3QJZ7 478 aa7.68□□□□□ -1.18
C11orf88-204ENST00000529661 F6X3S4 739 aa7.68□□□□□ -1.18
C11orf88-204ENST00000529661 MED26O95402 600 aa7.68□□□□□ -1.18
C11orf88-204ENST00000529661 ITGAEP38570 1179 aa7.68□□□□□ -1.18
C11orf88-204ENST00000529661 ST13P50502 369 aaKnown RBP7.68□□□□□ -1.18
C11orf88-204ENST00000529661 INPP5AQ14642 412 aa7.68□□□□□ -1.18
C11orf88-204ENST00000529661 DUSP27Q5VZP5 1158 aa7.68□□□□□ -1.18
C11orf88-204ENST00000529661 SCARA3Q6AZY7 606 aa7.68□□□□□ -1.18
C11orf88-204ENST00000529661 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.68□□□□□ -1.18
C11orf88-204ENST00000529661 ZNF765Q7L2R6 523 aa7.68□□□□□ -1.18
C11orf88-204ENST00000529661 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.68□□□□□ -1.18
C11orf88-204ENST00000529661 PCOLCE2Q9UKZ9 415 aa7.68□□□□□ -1.18
C11orf88-204ENST00000529661 PCDHB5Q9Y5E4 795 aa7.68□□□□□ -1.18
C11orf88-204ENST00000529661 HOXA10P31260 410 aaPredicted RBP7.67□□□□□ -1.18
C11orf88-204ENST00000529661 RPS26P62854 115 aaKnown RBP7.67□□□□□ -1.18
C11orf88-204ENST00000529661 CYP27A1Q02318 531 aa7.67□□□□□ -1.18
C11orf88-204ENST00000529661 INTS5Q6P9B9 1019 aaKnown RBP7.67□□□□□ -1.18
C11orf88-204ENST00000529661 LRFN4Q6PJG9 635 aa7.67□□□□□ -1.18
C11orf88-204ENST00000529661 AGMOQ6ZNB7 445 aa7.67□□□□□ -1.18
C11orf88-204ENST00000529661 NBPF11Q86T75 865 aa7.67□□□□□ -1.18
C11orf88-204ENST00000529661 PLPPR2Q96GM1 343 aa7.67□□□□□ -1.18
C11orf88-204ENST00000529661 NOC4LQ9BVI4 516 aaKnown RBP7.67□□□□□ -1.18
C11orf88-204ENST00000529661 LRRC4CQ9HCJ2 640 aa7.67□□□□□ -1.18
C11orf88-204ENST00000529661 TLR6Q9Y2C9 796 aa7.67□□□□□ -1.18
C11orf88-204ENST00000529661 FAM87AP0C7U9 286 aa7.66□□□□□ -1.18
C11orf88-204ENST00000529661 RLBP1P12271 317 aa7.66□□□□□ -1.18
C11orf88-204ENST00000529661 CPSF6Q16630 551 aaKnown RBP eCLIP7.66□□□□□ -1.18
C11orf88-204ENST00000529661 WIPI1Q5MNZ9 446 aaPredicted RBP7.66□□□□□ -1.18
C11orf88-204ENST00000529661 HDXQ7Z353 690 aa7.66□□□□□ -1.18
C11orf88-204ENST00000529661 BCL11AQ9H165 835 aa7.66□□□□□ -1.18
C11orf88-204ENST00000529661 MIR1-1HGQ9H1L0 117 aa7.66□□□□□ -1.18
C11orf88-204ENST00000529661 USP31Q70CQ4 1352 aa7.66□□□□□ -1.18
C11orf88-204ENST00000529661 FANCGO15287 622 aa7.65□□□□□ -1.18
C11orf88-204ENST00000529661 CYP26A1O43174 497 aa7.65□□□□□ -1.18
C11orf88-204ENST00000529661 FOSL1P15407 271 aa7.65□□□□□ -1.18
C11orf88-204ENST00000529661 TFE3P19532 575 aaPredicted RBP7.65□□□□□ -1.18
C11orf88-204ENST00000529661 NTF4P34130 210 aa7.65□□□□□ -1.18
C11orf88-204ENST00000529661 CDK8P49336 464 aa7.65□□□□□ -1.18
C11orf88-204ENST00000529661 ZBTB37Q5TC79 503 aa7.65□□□□□ -1.18
C11orf88-204ENST00000529661 OGFOD3Q6PK18 319 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms