RNA–Protein interactions for RNA: ENST00000529477.5

PTP4A2-212, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-212ENST00000529477 ZNF384Q8TF68 577 aa23.23■■□□□ 1.31
PTP4A2-212ENST00000529477 FAM198AQ9UFP1 575 aa23.23■■□□□ 1.31
PTP4A2-212ENST00000529477 MYO5AQ9Y4I1 1855 aaKnown RBP23.23■■□□□ 1.31
PTP4A2-212ENST00000529477 MKI67P46013 3256 aaKnown RBP23.22■■□□□ 1.31
PTP4A2-212ENST00000529477 OTOFQ9HC10 1997 aa23.22■■□□□ 1.31
PTP4A2-212ENST00000529477 MAP3K12Q12852 859 aa23.22■■□□□ 1.31
PTP4A2-212ENST00000529477 PICALMQ13492 652 aa23.22■■□□□ 1.31
PTP4A2-212ENST00000529477 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.22■■□□□ 1.31
PTP4A2-212ENST00000529477 ZNF341Q9BYN7 854 aa23.22■■□□□ 1.31
PTP4A2-212ENST00000529477 DCTPP1Q9H773 170 aa23.22■■□□□ 1.31
PTP4A2-212ENST00000529477 PIH1D3Q9NQM4 214 aaKnown RBP23.22■■□□□ 1.31
PTP4A2-212ENST00000529477 TM4SF4P48230 202 aa23.21■■□□□ 1.31
PTP4A2-212ENST00000529477 AAMPQ13685 434 aa23.21■■□□□ 1.31
PTP4A2-212ENST00000529477 TMED8Q6PL24 325 aaPredicted RBP23.21■■□□□ 1.31
PTP4A2-212ENST00000529477 WNK4Q96J92 1243 aa23.21■■□□□ 1.31
PTP4A2-212ENST00000529477 WRNIP1Q96S55 665 aa23.21■■□□□ 1.31
PTP4A2-212ENST00000529477 MANSC4A6NHS7 340 aaPredicted RBP23.2■■□□□ 1.3
PTP4A2-212ENST00000529477 WDHD1O75717 1129 aaPredicted RBP23.2■■□□□ 1.3
PTP4A2-212ENST00000529477 TBC1D8O95759 1140 aa23.2■■□□□ 1.3
PTP4A2-212ENST00000529477 MIGA2Q7L4E1 593 aa23.2■■□□□ 1.3
PTP4A2-212ENST00000529477 TEX11Q8IYF3 940 aa23.2■■□□□ 1.3
PTP4A2-212ENST00000529477 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.2■■□□□ 1.3
PTP4A2-212ENST00000529477 CFHR5Q9BXR6 569 aa23.2■■□□□ 1.3
PTP4A2-212ENST00000529477 ELP3Q9H9T3 547 aa23.2■■□□□ 1.3
PTP4A2-212ENST00000529477 PCDHB15Q9Y5E8 787 aa23.2■■□□□ 1.3
PTP4A2-212ENST00000529477 DOCK2Q92608 1830 aa23.19■■□□□ 1.3
PTP4A2-212ENST00000529477 NPM3O75607 178 aaKnown RBP23.19■■□□□ 1.3
PTP4A2-212ENST00000529477 CYP7A1P22680 504 aa23.19■■□□□ 1.3
PTP4A2-212ENST00000529477 INHBEP58166 350 aa23.19■■□□□ 1.3
PTP4A2-212ENST00000529477 RHBDL3P58872 404 aa23.19■■□□□ 1.3
PTP4A2-212ENST00000529477 VGLL4Q14135 290 aa23.19■■□□□ 1.3
PTP4A2-212ENST00000529477 FBXO46Q6PJ61 603 aaPredicted RBP23.19■■□□□ 1.3
PTP4A2-212ENST00000529477 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.19■■□□□ 1.3
PTP4A2-212ENST00000529477 CERS3Q8IU89 383 aa23.19■■□□□ 1.3
PTP4A2-212ENST00000529477 GPATCH3Q96I76 525 aa23.19■■□□□ 1.3
PTP4A2-212ENST00000529477 DNAJC2Q99543 621 aaKnown RBP23.19■■□□□ 1.3
PTP4A2-212ENST00000529477 AATFQ9NY61 560 aaKnown RBP eCLIP23.19■■□□□ 1.33e-7■□□□□ 10.4
PTP4A2-212ENST00000529477 ZBTB47Q9UFB7 747 aaPredicted RBP23.19■■□□□ 1.3
PTP4A2-212ENST00000529477 NDUFB9Q9Y6M9 179 aa23.19■■□□□ 1.3
PTP4A2-212ENST00000529477 RFX7Q2KHR2 1363 aa23.18■■□□□ 1.3
PTP4A2-212ENST00000529477 GPR25O00155 361 aa23.18■■□□□ 1.3
PTP4A2-212ENST00000529477 RBBP6Q7Z6E9 1792 aaKnown RBP23.18■■□□□ 1.3
PTP4A2-212ENST00000529477 CENPFP49454 3210 aa23.17■■□□□ 1.3
PTP4A2-212ENST00000529477 SMARCA5O60264 1052 aaPredicted RBP23.17■■□□□ 1.3
PTP4A2-212ENST00000529477 ATP5JP18859 108 aa23.17■■□□□ 1.3
PTP4A2-212ENST00000529477 ZFPM1Q8IX07 1006 aa23.17■■□□□ 1.3
PTP4A2-212ENST00000529477 MAGEB6Q8N7X4 407 aa23.17■■□□□ 1.3
PTP4A2-212ENST00000529477 OPTNQ96CV9 577 aa23.17■■□□□ 1.3
PTP4A2-212ENST00000529477 ANTXR1Q9H6X2 564 aa23.17■■□□□ 1.3
PTP4A2-212ENST00000529477 GOLIM4O00461 696 aa23.16■■□□□ 1.3
PTP4A2-212ENST00000529477 PPP4CP60510 307 aa23.16■■□□□ 1.3
PTP4A2-212ENST00000529477 SH3RF3Q8TEJ3 882 aaPredicted RBP23.16■■□□□ 1.3
PTP4A2-212ENST00000529477 DDX4Q9NQI0 724 aaKnown RBP23.16■■□□□ 1.3
PTP4A2-212ENST00000529477 ALDH1A1P00352 501 aa23.15■■□□□ 1.3
PTP4A2-212ENST00000529477 ERO1BQ86YB8 467 aa23.15■■□□□ 1.3
PTP4A2-212ENST00000529477 BOLA2Q9H3K6 86 aa23.15■■□□□ 1.3
PTP4A2-212ENST00000529477 OTUD7BQ6GQQ9 843 aa23.14■■□□□ 1.29
PTP4A2-212ENST00000529477 ZKSCAN4Q969J2 545 aaPredicted RBP23.14■■□□□ 1.29
PTP4A2-212ENST00000529477 OTUD5Q96G74 571 aa23.14■■□□□ 1.29
PTP4A2-212ENST00000529477 OSBPL5Q9H0X9 879 aaPredicted RBP23.14■■□□□ 1.29
PTP4A2-212ENST00000529477 PAG1Q9NWQ8 432 aa23.14■■□□□ 1.29
PTP4A2-212ENST00000529477 COL2A1P02458 1487 aaPredicted RBP23.13■■□□□ 1.29
PTP4A2-212ENST00000529477 DDTLA6NHG4 134 aaPredicted RBP23.13■■□□□ 1.29
PTP4A2-212ENST00000529477 SPDYE5A6NIY4 337 aa23.13■■□□□ 1.29
PTP4A2-212ENST00000529477 SLC9C2Q5TAH2 1124 aa23.13■■□□□ 1.29
PTP4A2-212ENST00000529477 ADGRA1Q86SQ6 560 aa23.13■■□□□ 1.29
PTP4A2-212ENST00000529477 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.13■■□□□ 1.29
PTP4A2-212ENST00000529477 ECHDC1Q9NTX5 307 aa23.13■■□□□ 1.29
PTP4A2-212ENST00000529477 SUPT16HQ9Y5B9 1047 aaKnown RBP23.13■■□□□ 1.29
PTP4A2-212ENST00000529477 SNCAIPQ9Y6H5 919 aa23.13■■□□□ 1.29
PTP4A2-212ENST00000529477 ATRNL1Q5VV63 1379 aa23.13■■□□□ 1.29
PTP4A2-212ENST00000529477 FKTNO75072 461 aa23.12■■□□□ 1.29
PTP4A2-212ENST00000529477 INPP5BP32019 993 aa23.12■■□□□ 1.29
PTP4A2-212ENST00000529477 GTF2A2P52657 109 aa23.12■■□□□ 1.29
PTP4A2-212ENST00000529477 MIGA1Q8NAN2 632 aa23.12■■□□□ 1.29
PTP4A2-212ENST00000529477 TGFBRAP1Q8WUH2 860 aa23.12■■□□□ 1.29
PTP4A2-212ENST00000529477 HAUS7Q99871 368 aa23.12■■□□□ 1.29
PTP4A2-212ENST00000529477 DHX36Q9H2U1 1008 aaKnown RBP23.12■■□□□ 1.29
PTP4A2-212ENST00000529477 ZNF112Q9UJU3 913 aa23.12■■□□□ 1.29
PTP4A2-212ENST00000529477 BRCA2P51587 3418 aa23.11■■□□□ 1.29
PTP4A2-212ENST00000529477 GJA5P36382 358 aa23.11■■□□□ 1.29
PTP4A2-212ENST00000529477 SH3BP5LQ7L8J4 393 aa23.11■■□□□ 1.29
PTP4A2-212ENST00000529477 GCC1Q96CN9 775 aa23.11■■□□□ 1.29
PTP4A2-212ENST00000529477 CDK5RAP2Q96SN8 1893 aa23.11■■□□□ 1.29
PTP4A2-212ENST00000529477 FOCADQ5VW36 1801 aa23.1■■□□□ 1.29
PTP4A2-212ENST00000529477 PDE6AP16499 860 aa23.1■■□□□ 1.29
PTP4A2-212ENST00000529477 HDAC1Q13547 482 aaPredicted RBP23.1■■□□□ 1.29
PTP4A2-212ENST00000529477 IFNL1Q8IU54 200 aa23.1■■□□□ 1.29
PTP4A2-212ENST00000529477 MAPKAPK5Q8IW41 473 aa23.1■■□□□ 1.29
PTP4A2-212ENST00000529477 R3HDMLQ9H3Y0 253 aa23.1■■□□□ 1.29
PTP4A2-212ENST00000529477 PICK1Q9NRD5 415 aa23.1■■□□□ 1.29
PTP4A2-212ENST00000529477 TBC1D12O60347 775 aa23.09■■□□□ 1.29
PTP4A2-212ENST00000529477 USP5P45974 858 aa23.09■■□□□ 1.29
PTP4A2-212ENST00000529477 DYNLL1P63167 89 aaKnown RBP23.09■■□□□ 1.29
PTP4A2-212ENST00000529477 PPATQ06203 517 aa23.09■■□□□ 1.29
PTP4A2-212ENST00000529477 PPIL2Q13356 520 aa23.09■■□□□ 1.29
PTP4A2-212ENST00000529477 NOL9Q5SY16 702 aaKnown RBP23.09■■□□□ 1.29
PTP4A2-212ENST00000529477 CNKSR2Q8WXI2 1034 aa23.09■■□□□ 1.29
PTP4A2-212ENST00000529477 TRIM34Q9BYJ4 488 aa23.09■■□□□ 1.29
PTP4A2-212ENST00000529477 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms