RNA–Protein interactions for RNA: ENST00000529386.5

CMTM1-212, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 924 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-212ENST00000529386 M0R2C6 588 aa16.87■□□□□ 0.29
CMTM1-212ENST00000529386 EIF5BO60841 1220 aaKnown RBP16.87■□□□□ 0.29
CMTM1-212ENST00000529386 APPP05067 770 aa16.87■□□□□ 0.29
CMTM1-212ENST00000529386 TCP10Q12799 353 aa16.87■□□□□ 0.29
CMTM1-212ENST00000529386 NFIAQ12857 509 aa16.87■□□□□ 0.29
CMTM1-212ENST00000529386 SLFNL1Q499Z3 407 aa16.87■□□□□ 0.29
CMTM1-212ENST00000529386 MAPKAPK5Q8IW41 473 aa16.87■□□□□ 0.29
CMTM1-212ENST00000529386 FAM227BQ96M60 508 aa16.87■□□□□ 0.29
CMTM1-212ENST00000529386 OSBPL5Q9H0X9 879 aaPredicted RBP16.87■□□□□ 0.29
CMTM1-212ENST00000529386 A0A0D9SFI3 127 aa16.86■□□□□ 0.29
CMTM1-212ENST00000529386 PATL2C9JE40 543 aaKnown RBP16.86■□□□□ 0.29
CMTM1-212ENST00000529386 ADM5C9JUS6 153 aa16.86■□□□□ 0.29
CMTM1-212ENST00000529386 CHGBP05060 677 aa16.86■□□□□ 0.29
CMTM1-212ENST00000529386 HLA-DOAP06340 250 aa16.86■□□□□ 0.29
CMTM1-212ENST00000529386 FAM198AQ9UFP1 575 aa16.86■□□□□ 0.29
CMTM1-212ENST00000529386 FLT1P17948 1338 aa16.86■□□□□ 0.29
CMTM1-212ENST00000529386 CCDC171Q6TFL3 1326 aa16.86■□□□□ 0.29
CMTM1-212ENST00000529386 DCAF15Q66K64 600 aa16.85■□□□□ 0.29
CMTM1-212ENST00000529386 KIAA1211Q6ZU35 1233 aa16.85■□□□□ 0.29
CMTM1-212ENST00000529386 TTC6Q86TZ1 520 aa16.85■□□□□ 0.29
CMTM1-212ENST00000529386 CDCA5Q96FF9 252 aa16.85■□□□□ 0.29
CMTM1-212ENST00000529386 SEC62Q99442 399 aaKnown RBP16.85■□□□□ 0.29
CMTM1-212ENST00000529386 TRIM34Q9BYJ4 488 aa16.85■□□□□ 0.29
CMTM1-212ENST00000529386 TMEM39BQ9GZU3 492 aa16.85■□□□□ 0.29
CMTM1-212ENST00000529386 COL2A1P02458 1487 aaPredicted RBP16.85■□□□□ 0.29
CMTM1-212ENST00000529386 FOCADQ5VW36 1801 aa16.84■□□□□ 0.29
CMTM1-212ENST00000529386 PPP1R12BO60237 982 aaPredicted RBP16.84■□□□□ 0.29
CMTM1-212ENST00000529386 ITGBL1O95965 494 aaPredicted RBP16.84■□□□□ 0.29
CMTM1-212ENST00000529386 POLR3DP05423 398 aaPredicted RBP16.84■□□□□ 0.29
CMTM1-212ENST00000529386 TDO2P48775 406 aa16.84■□□□□ 0.29
CMTM1-212ENST00000529386 SDR42E1Q8WUS8 393 aa16.84■□□□□ 0.29
CMTM1-212ENST00000529386 CSRNP1Q96S65 589 aa16.84■□□□□ 0.29
CMTM1-212ENST00000529386 DCP1AQ9NPI6 582 aaPredicted RBP16.84■□□□□ 0.29
CMTM1-212ENST00000529386 DDX4Q9NQI0 724 aaKnown RBP16.84■□□□□ 0.29
CMTM1-212ENST00000529386 MCM9Q9NXL9 1143 aa16.84■□□□□ 0.29
CMTM1-212ENST00000529386 PI4KBQ9UBF8 816 aa16.84■□□□□ 0.29
CMTM1-212ENST00000529386 TAOK2Q9UL54 1235 aa16.84■□□□□ 0.29
CMTM1-212ENST00000529386 CNTNAP1P78357 1384 aa16.84■□□□□ 0.29
CMTM1-212ENST00000529386 CDK5RAP2Q96SN8 1893 aa16.84■□□□□ 0.29
CMTM1-212ENST00000529386 MYH1P12882 1939 aa16.83■□□□□ 0.28
CMTM1-212ENST00000529386 ATRNL1Q5VV63 1379 aa16.83■□□□□ 0.28
CMTM1-212ENST00000529386 NAPBQ9H115 298 aa16.83■□□□□ 0.28
CMTM1-212ENST00000529386 ARPP21Q9UBL0 812 aaPredicted RBP16.83■□□□□ 0.28
CMTM1-212ENST00000529386 SCAF8Q9UPN6 1271 aaKnown RBP16.83■□□□□ 0.28
CMTM1-212ENST00000529386 GSG1L2A8MUP6 293 aa16.82■□□□□ 0.28
CMTM1-212ENST00000529386 TRAF5O00463 557 aa16.82■□□□□ 0.28
CMTM1-212ENST00000529386 SGSM2O43147 1006 aa16.82■□□□□ 0.28
CMTM1-212ENST00000529386 PRKAB2O43741 272 aa16.82■□□□□ 0.28
CMTM1-212ENST00000529386 FKBP1BP68106 108 aa16.82■□□□□ 0.28
CMTM1-212ENST00000529386 CCDC129Q6ZRS4 1044 aa16.82■□□□□ 0.28
CMTM1-212ENST00000529386 FOXP4Q8IVH2 680 aaPredicted RBP16.82■□□□□ 0.28
CMTM1-212ENST00000529386 C2orf69Q8N8R5 385 aa16.82■□□□□ 0.28
CMTM1-212ENST00000529386 ZNF408Q9H9D4 720 aa16.82■□□□□ 0.28
CMTM1-212ENST00000529386 SAP30BPQ9UHR5 308 aaKnown RBP16.82■□□□□ 0.28
CMTM1-212ENST00000529386 CTNNA3Q9UI47 895 aa16.82■□□□□ 0.28
CMTM1-212ENST00000529386 TRPM7Q96QT4 1865 aa16.82■□□□□ 0.28
CMTM1-212ENST00000529386 CELF2O95319 508 aaKnown RBP16.81■□□□□ 0.28
CMTM1-212ENST00000529386 SLC3A2P08195 630 aaKnown RBP16.81■□□□□ 0.28
CMTM1-212ENST00000529386 HSPD1P10809 573 aaKnown RBP16.81■□□□□ 0.28
CMTM1-212ENST00000529386 TTLL12Q14166 644 aaPredicted RBP16.81■□□□□ 0.28
CMTM1-212ENST00000529386 ALX1Q15699 326 aa16.81■□□□□ 0.28
CMTM1-212ENST00000529386 NBPF12Q5TAG4 269 aaPredicted RBP16.81■□□□□ 0.28
CMTM1-212ENST00000529386 ARMC9Q7Z3E5 817 aa16.81■□□□□ 0.28
CMTM1-212ENST00000529386 ZNF589Q86UQ0 364 aaPredicted RBP16.81■□□□□ 0.28
CMTM1-212ENST00000529386 ZFPM1Q8IX07 1006 aa16.81■□□□□ 0.28
CMTM1-212ENST00000529386 IFNL3Q8IZI9 196 aa16.81■□□□□ 0.28
CMTM1-212ENST00000529386 CRACR2BQ8N4Y2 399 aaPredicted RBP16.81■□□□□ 0.28
CMTM1-212ENST00000529386 TEPSINQ96N21 525 aa16.81■□□□□ 0.28
CMTM1-212ENST00000529386 ESYT1Q9BSJ8 1104 aa16.81■□□□□ 0.28
CMTM1-212ENST00000529386 DSCC1Q9BVC3 393 aa16.81■□□□□ 0.28
CMTM1-212ENST00000529386 MKRN1Q9UHC7 482 aaKnown RBP16.81■□□□□ 0.28
CMTM1-212ENST00000529386 HERC5Q9UII4 1024 aaKnown RBP16.81■□□□□ 0.28
CMTM1-212ENST00000529386 PALD1Q9ULE6 856 aa16.81■□□□□ 0.28
CMTM1-212ENST00000529386 NAV1Q8NEY1 1877 aa16.81■□□□□ 0.28
CMTM1-212ENST00000529386 PASKQ96RG2 1323 aa16.8■□□□□ 0.28
CMTM1-212ENST00000529386 IREB2P48200 963 aaKnown RBP16.8■□□□□ 0.28
CMTM1-212ENST00000529386 SBK1Q52WX2 424 aa16.8■□□□□ 0.28
CMTM1-212ENST00000529386 PRAMEF18Q5VWM3 479 aa16.8■□□□□ 0.28
CMTM1-212ENST00000529386 ZNF341Q9BYN7 854 aa16.8■□□□□ 0.28
CMTM1-212ENST00000529386 EHD4Q9H223 541 aa16.8■□□□□ 0.28
CMTM1-212ENST00000529386 ZNF287Q9HBT7 754 aa16.8■□□□□ 0.28
CMTM1-212ENST00000529386 ZMYM6O95789 1325 aa16.79■□□□□ 0.28
CMTM1-212ENST00000529386 BAZ2AQ9UIF9 1905 aaKnown RBP16.79■□□□□ 0.28
CMTM1-212ENST00000529386 DDTLA6NHG4 134 aaPredicted RBP16.79■□□□□ 0.28
CMTM1-212ENST00000529386 USP17L12C9JPN9 530 aa16.79■□□□□ 0.28
CMTM1-212ENST00000529386 USP17L21D6R901 530 aa16.79■□□□□ 0.28
CMTM1-212ENST00000529386 TBC1D12O60347 775 aa16.79■□□□□ 0.28
CMTM1-212ENST00000529386 REC8O95072 547 aa16.79■□□□□ 0.28
CMTM1-212ENST00000529386 GBA2Q9HCG7 927 aaPredicted RBP16.79■□□□□ 0.28
CMTM1-212ENST00000529386 SERPINB13Q9UIV8 391 aa16.79■□□□□ 0.28
CMTM1-212ENST00000529386 UNCXA6NJT0 531 aa16.78■□□□□ 0.28
CMTM1-212ENST00000529386 TMEM88BA6NKF7 163 aa16.78■□□□□ 0.28
CMTM1-212ENST00000529386 MINDY4BA8MYZ0 360 aa16.78■□□□□ 0.28
CMTM1-212ENST00000529386 C12orf60Q5U649 245 aa16.78■□□□□ 0.28
CMTM1-212ENST00000529386 CTR9Q6PD62 1173 aa16.78■□□□□ 0.28
CMTM1-212ENST00000529386 SH3BP5LQ7L8J4 393 aa16.78■□□□□ 0.28
CMTM1-212ENST00000529386 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.78■□□□□ 0.28
CMTM1-212ENST00000529386 ANO2Q9NQ90 1003 aa16.78■□□□□ 0.28
CMTM1-212ENST00000529386 SWAP70Q9UH65 585 aa16.78■□□□□ 0.28
CMTM1-212ENST00000529386 U3KPZ7 1027 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms