RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 FBXO3Q9UK99 471 aa16.83■□□□□ 0.28
HIF3A-212ENST00000529205 SALL1Q9NSC2 1324 aa16.82■□□□□ 0.28
HIF3A-212ENST00000529205 ZBTB7BO15156 539 aaPredicted RBP16.82■□□□□ 0.28
HIF3A-212ENST00000529205 PTPRAP18433 802 aa16.82■□□□□ 0.28
HIF3A-212ENST00000529205 IRF5Q13568 498 aa16.82■□□□□ 0.28
HIF3A-212ENST00000529205 ATP2B3Q16720 1220 aa16.82■□□□□ 0.28
HIF3A-212ENST00000529205 SLC17A8Q8NDX2 589 aa16.82■□□□□ 0.28
HIF3A-212ENST00000529205 USP44Q9H0E7 712 aa16.82■□□□□ 0.28
HIF3A-212ENST00000529205 TAOK2Q9UL54 1235 aa16.82■□□□□ 0.28
HIF3A-212ENST00000529205 AK9Q5TCS8 1911 aa16.81■□□□□ 0.28
HIF3A-212ENST00000529205 CTNND1O60716 968 aaKnown RBP16.81■□□□□ 0.28
HIF3A-212ENST00000529205 INHAP05111 366 aa16.81■□□□□ 0.28
HIF3A-212ENST00000529205 DEFB118Q96PH6 123 aa16.81■□□□□ 0.28
HIF3A-212ENST00000529205 IDI2Q9BXS1 227 aa16.81■□□□□ 0.28
HIF3A-212ENST00000529205 PRO3102Q9H379 93 aa16.81■□□□□ 0.28
HIF3A-212ENST00000529205 PNMA3Q9UL41 463 aa16.81■□□□□ 0.28
HIF3A-212ENST00000529205 HDAC5Q9UQL6 1122 aa16.81■□□□□ 0.28
HIF3A-212ENST00000529205 AFG3L2Q9Y4W6 797 aa16.81■□□□□ 0.28
HIF3A-212ENST00000529205 PHF20L1A8MW92 1017 aa16.8■□□□□ 0.28
HIF3A-212ENST00000529205 RGS3P49796 1198 aa16.8■□□□□ 0.28
HIF3A-212ENST00000529205 DZIP1Q86YF9 867 aaKnown RBP16.8■□□□□ 0.28
HIF3A-212ENST00000529205 FAM9BQ8IZU0 186 aa16.8■□□□□ 0.28
HIF3A-212ENST00000529205 CIAO1O76071 339 aa16.79■□□□□ 0.28
HIF3A-212ENST00000529205 ELNP15502 786 aa16.79■□□□□ 0.28
HIF3A-212ENST00000529205 RFX5P48382 616 aaPredicted RBP16.79■□□□□ 0.28
HIF3A-212ENST00000529205 SPTY2D1Q68D10 685 aaPredicted RBP16.79■□□□□ 0.28
HIF3A-212ENST00000529205 ATG9AQ7Z3C6 839 aa16.79■□□□□ 0.28
HIF3A-212ENST00000529205 NECAB2Q7Z6G3 386 aa16.79■□□□□ 0.28
HIF3A-212ENST00000529205 ZFPM1Q8IX07 1006 aa16.79■□□□□ 0.28
HIF3A-212ENST00000529205 SIL1Q9H173 461 aa16.79■□□□□ 0.28
HIF3A-212ENST00000529205 TRIM75PA6NK02 468 aa16.78■□□□□ 0.28
HIF3A-212ENST00000529205 DLL1O00548 723 aa16.78■□□□□ 0.28
HIF3A-212ENST00000529205 UBTFL1P0CB47 393 aaPredicted RBP16.78■□□□□ 0.28
HIF3A-212ENST00000529205 ABCF2Q9UG63 623 aa16.78■□□□□ 0.28
HIF3A-212ENST00000529205 AGTPBP1Q9UPW5 1226 aa16.78■□□□□ 0.28
HIF3A-212ENST00000529205 MYH13Q9UKX3 1938 aa16.78■□□□□ 0.28
HIF3A-212ENST00000529205 IL15P40933 162 aaPredicted RBP16.77■□□□□ 0.28
HIF3A-212ENST00000529205 MAP3K10Q02779 954 aa16.77■□□□□ 0.28
HIF3A-212ENST00000529205 PABPC4Q13310 644 aaKnown RBP eCLIP16.77■□□□□ 0.28
HIF3A-212ENST00000529205 PICALMQ13492 652 aa16.77■□□□□ 0.28
HIF3A-212ENST00000529205 ANKRD13CQ8N6S4 541 aa16.77■□□□□ 0.28
HIF3A-212ENST00000529205 PAK6Q9NQU5 681 aaPredicted RBP16.77■□□□□ 0.28
HIF3A-212ENST00000529205 PHKA1P46020 1223 aa16.76■□□□□ 0.27
HIF3A-212ENST00000529205 FAM110CQ1W6H9 321 aa16.76■□□□□ 0.27
HIF3A-212ENST00000529205 ANKLE1Q8NAG6 615 aa16.76■□□□□ 0.27
HIF3A-212ENST00000529205 PAWRQ96IZ0 340 aaKnown RBP16.76■□□□□ 0.27
HIF3A-212ENST00000529205 TBC1D2Q9BYX2 928 aa16.76■□□□□ 0.27
HIF3A-212ENST00000529205 STAP2Q9UGK3 403 aa16.76■□□□□ 0.27
HIF3A-212ENST00000529205 GAKO14976 1311 aa16.75■□□□□ 0.27
HIF3A-212ENST00000529205 ZBTB22O15209 634 aa16.75■□□□□ 0.27
HIF3A-212ENST00000529205 BTDP43251 543 aa16.75■□□□□ 0.27
HIF3A-212ENST00000529205 GCLCP48506 637 aaPredicted RBP16.75■□□□□ 0.27
HIF3A-212ENST00000529205 CCDC102BQ68D86 513 aa16.75■□□□□ 0.27
HIF3A-212ENST00000529205 PROCA1Q8NCQ7 364 aaPredicted RBP16.75■□□□□ 0.27
HIF3A-212ENST00000529205 SSH1Q8WYL5 1049 aa16.75■□□□□ 0.27
HIF3A-212ENST00000529205 FAM163AQ96GL9 167 aaPredicted RBP16.75■□□□□ 0.27
HIF3A-212ENST00000529205 CRISPLD2Q9H0B8 497 aa16.75■□□□□ 0.27
HIF3A-212ENST00000529205 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.75■□□□□ 0.27
HIF3A-212ENST00000529205 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.75■□□□□ 0.27
HIF3A-212ENST00000529205 MGAMO43451 1857 aa16.75■□□□□ 0.27
HIF3A-212ENST00000529205 ATRNL1Q5VV63 1379 aa16.75■□□□□ 0.27
HIF3A-212ENST00000529205 DDTLA6NHG4 134 aaPredicted RBP16.74■□□□□ 0.27
HIF3A-212ENST00000529205 E9PSI1 815 aa16.74■□□□□ 0.27
HIF3A-212ENST00000529205 TBC1D12O60347 775 aa16.74■□□□□ 0.27
HIF3A-212ENST00000529205 SH3BP5LQ7L8J4 393 aa16.74■□□□□ 0.27
HIF3A-212ENST00000529205 OSBPL5Q9H0X9 879 aaPredicted RBP16.74■□□□□ 0.27
HIF3A-212ENST00000529205 HMX1Q9NP08 348 aaPredicted RBP16.74■□□□□ 0.27
HIF3A-212ENST00000529205 DOCK2Q92608 1830 aa16.73■□□□□ 0.27
HIF3A-212ENST00000529205 HMGCRP04035 888 aa16.73■□□□□ 0.27
HIF3A-212ENST00000529205 BMP8BP34820 402 aa16.73■□□□□ 0.27
HIF3A-212ENST00000529205 ALDH1L2Q3SY69 923 aa16.73■□□□□ 0.27
HIF3A-212ENST00000529205 ERICH6Q7L0X2 663 aa16.73■□□□□ 0.27
HIF3A-212ENST00000529205 AKAP2Q9Y2D5 859 aa16.73■□□□□ 0.27
HIF3A-212ENST00000529205 MROH7-TTC4A0A0A0MT08 1334 aa16.72■□□□□ 0.27
HIF3A-212ENST00000529205 PDS5AQ29RF7 1337 aaKnown RBP16.72■□□□□ 0.27
HIF3A-212ENST00000529205 RPTORQ8N122 1335 aa16.72■□□□□ 0.27
HIF3A-212ENST00000529205 MAP4K4O95819 1239 aaPredicted RBP16.72■□□□□ 0.27
HIF3A-212ENST00000529205 LDHCP07864 332 aa16.72■□□□□ 0.27
HIF3A-212ENST00000529205 GSTO1P78417 241 aa16.72■□□□□ 0.27
HIF3A-212ENST00000529205 SPP2Q13103 211 aa16.72■□□□□ 0.27
HIF3A-212ENST00000529205 GPR153Q6NV75 609 aa16.72■□□□□ 0.27
HIF3A-212ENST00000529205 C7orf61Q8IZ16 206 aa16.72■□□□□ 0.27
HIF3A-212ENST00000529205 ZNF280CQ8ND82 737 aa16.72■□□□□ 0.27
HIF3A-212ENST00000529205 LRCH3Q96II8 777 aa16.72■□□□□ 0.27
HIF3A-212ENST00000529205 NBPF3Q9H094 633 aa16.72■□□□□ 0.27
HIF3A-212ENST00000529205 AS3MTQ9HBK9 375 aa16.72■□□□□ 0.27
HIF3A-212ENST00000529205 SMC4Q9NTJ3 1288 aa16.72■□□□□ 0.27
HIF3A-212ENST00000529205 NPM3O75607 178 aaKnown RBP16.71■□□□□ 0.27
HIF3A-212ENST00000529205 RASGRF1Q13972 1273 aa16.71■□□□□ 0.27
HIF3A-212ENST00000529205 MVPQ14764 893 aaKnown RBP16.71■□□□□ 0.27
HIF3A-212ENST00000529205 TREML2Q5T2D2 321 aa16.71■□□□□ 0.27
HIF3A-212ENST00000529205 DDX4Q9NQI0 724 aaKnown RBP16.71■□□□□ 0.27
HIF3A-212ENST00000529205 ZNF521Q96K83 1311 aa16.7■□□□□ 0.26
HIF3A-212ENST00000529205 RFX7Q2KHR2 1363 aa16.7■□□□□ 0.26
HIF3A-212ENST00000529205 GPR75-ASB3A0A0A6YYF3 556 aa16.7■□□□□ 0.26
HIF3A-212ENST00000529205 SOX1O00570 391 aaPredicted RBP16.7■□□□□ 0.26
HIF3A-212ENST00000529205 TIMM10P62072 90 aa16.7■□□□□ 0.26
HIF3A-212ENST00000529205 GDF15Q99988 308 aa16.7■□□□□ 0.26
HIF3A-212ENST00000529205 C11orf49Q9H6J7 331 aa16.7■□□□□ 0.26
HIF3A-212ENST00000529205 COPRSQ9NQ92 184 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms