RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 FCHSD1Q86WN1 690 aa9.15□□□□□ -0.95
C11orf88-203ENST00000529167 DRAXINQ8NBI3 349 aaPredicted RBP9.15□□□□□ -0.95
C11orf88-203ENST00000529167 MSANTD4Q8NCY6 345 aa9.15□□□□□ -0.95
C11orf88-203ENST00000529167 MKL1Q969V6 931 aa9.15□□□□□ -0.95
C11orf88-203ENST00000529167 CLIC6Q96NY7 704 aa9.15□□□□□ -0.95
C11orf88-203ENST00000529167 A0A1B0GUA9 196 aa9.14□□□□□ -0.95
C11orf88-203ENST00000529167 POTEB2H3BUK9 544 aa9.14□□□□□ -0.95
C11orf88-203ENST00000529167 PECAM1P16284 738 aaPredicted RBP9.14□□□□□ -0.95
C11orf88-203ENST00000529167 RDXP35241 583 aaKnown RBP9.14□□□□□ -0.95
C11orf88-203ENST00000529167 AARSP49588 968 aaKnown RBP eCLIP9.14□□□□□ -0.95
C11orf88-203ENST00000529167 PDCD2Q16342 344 aaPredicted RBP9.14□□□□□ -0.95
C11orf88-203ENST00000529167 TLDC1Q6P9B6 456 aa9.14□□□□□ -0.95
C11orf88-203ENST00000529167 TRIM74Q86UV6 250 aa9.14□□□□□ -0.95
C11orf88-203ENST00000529167 TRIM73Q86UV7 250 aa9.14□□□□□ -0.95
C11orf88-203ENST00000529167 IQCA1Q86XH1 822 aa9.14□□□□□ -0.95
C11orf88-203ENST00000529167 MICAL1Q8TDZ2 1067 aa9.14□□□□□ -0.95
C11orf88-203ENST00000529167 TTC14Q96N46 770 aa9.14□□□□□ -0.95
C11orf88-203ENST00000529167 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.14□□□□□ -0.95
C11orf88-203ENST00000529167 MON2Q7Z3U7 1717 aa9.14□□□□□ -0.95
C11orf88-203ENST00000529167 EBAG9O00559 213 aa9.14□□□□□ -0.95
C11orf88-203ENST00000529167 PRPF6O94906 941 aaKnown RBP9.14□□□□□ -0.95
C11orf88-203ENST00000529167 SNUPNO95149 360 aaKnown RBP9.14□□□□□ -0.95
C11orf88-203ENST00000529167 INPP5BP32019 993 aa9.14□□□□□ -0.95
C11orf88-203ENST00000529167 SLC8A3P57103 927 aa9.14□□□□□ -0.95
C11orf88-203ENST00000529167 PPP2R3AQ06190 1150 aa9.14□□□□□ -0.95
C11orf88-203ENST00000529167 SPTY2D1Q68D10 685 aaPredicted RBP9.14□□□□□ -0.95
C11orf88-203ENST00000529167 MAB21L3Q8N8X9 362 aa9.14□□□□□ -0.95
C11orf88-203ENST00000529167 PLEKHF1Q96S99 279 aa9.14□□□□□ -0.95
C11orf88-203ENST00000529167 VIPAS39Q9H9C1 493 aa9.14□□□□□ -0.95
C11orf88-203ENST00000529167 UBR3Q6ZT12 1888 aa9.14□□□□□ -0.95
C11orf88-203ENST00000529167 ABCD1P33897 745 aa9.13□□□□□ -0.95
C11orf88-203ENST00000529167 KRT85P78386 507 aa9.13□□□□□ -0.95
C11orf88-203ENST00000529167 RBBP5Q15291 538 aaKnown RBP9.13□□□□□ -0.95
C11orf88-203ENST00000529167 CDCA2Q69YH5 1023 aaPredicted RBP9.13□□□□□ -0.95
C11orf88-203ENST00000529167 HOMER1Q86YM7 354 aa9.13□□□□□ -0.95
C11orf88-203ENST00000529167 DHX40Q8IX18 779 aaKnown RBP9.13□□□□□ -0.95
C11orf88-203ENST00000529167 OTUD7AQ8TE49 926 aaPredicted RBP9.13□□□□□ -0.95
C11orf88-203ENST00000529167 FAM204AQ9H8W3 233 aa9.13□□□□□ -0.95
C11orf88-203ENST00000529167 NMRK2Q9NPI5 230 aa9.13□□□□□ -0.95
C11orf88-203ENST00000529167 CPSF2Q9P2I0 782 aaKnown RBP9.13□□□□□ -0.95
C11orf88-203ENST00000529167 CCNL1Q9UK58 526 aaPredicted RBP9.13□□□□□ -0.95
C11orf88-203ENST00000529167 BRCA1P38398 1863 aaKnown RBP9.13□□□□□ -0.95
C11orf88-203ENST00000529167 PRPHP41219 470 aa9.13□□□□□ -0.95
C11orf88-203ENST00000529167 SETDB1Q15047 1291 aa9.13□□□□□ -0.95
C11orf88-203ENST00000529167 MSL1Q68DK7 614 aa9.13□□□□□ -0.95
C11orf88-203ENST00000529167 RCSD1Q6JBY9 416 aa9.13□□□□□ -0.95
C11orf88-203ENST00000529167 SYTL4Q96C24 671 aaPredicted RBP9.13□□□□□ -0.95
C11orf88-203ENST00000529167 ANKZF1Q9H8Y5 726 aa9.13□□□□□ -0.95
C11orf88-203ENST00000529167 HOMER3Q9NSC5 361 aa9.13□□□□□ -0.95
C11orf88-203ENST00000529167 CABP1Q9NZU7 370 aa9.13□□□□□ -0.95
C11orf88-203ENST00000529167 ANAPC4Q9UJX5 808 aa9.13□□□□□ -0.95
C11orf88-203ENST00000529167 C4BP0C0L5 1744 aa9.13□□□□□ -0.95
C11orf88-203ENST00000529167 EME2A4GXA9 379 aaPredicted RBP9.13□□□□□ -0.95
C11orf88-203ENST00000529167 NRDCO43847 1150 aa9.13□□□□□ -0.95
C11orf88-203ENST00000529167 ERLIN1O75477 346 aa9.13□□□□□ -0.95
C11orf88-203ENST00000529167 HSPA1AP0DMV8 641 aaKnown RBP9.13□□□□□ -0.95
C11orf88-203ENST00000529167 HSPA1BP0DMV9 641 aaKnown RBP9.13□□□□□ -0.95
C11orf88-203ENST00000529167 MCM6Q14566 821 aa9.13□□□□□ -0.95
C11orf88-203ENST00000529167 HSP90B2PQ58FF3 399 aa9.13□□□□□ -0.95
C11orf88-203ENST00000529167 TCP11Q8WWU5 503 aa9.13□□□□□ -0.95
C11orf88-203ENST00000529167 SCAND2PQ9GZW5 306 aaPredicted RBP9.13□□□□□ -0.95
C11orf88-203ENST00000529167 KCNQ4P56696 695 aa9.12□□□□□ -0.95
C11orf88-203ENST00000529167 MRPL50Q8N5N7 158 aaKnown RBP9.12□□□□□ -0.95
C11orf88-203ENST00000529167 CEP112Q8N8E3 955 aa9.12□□□□□ -0.95
C11orf88-203ENST00000529167 AFAP1L1Q8TED9 768 aa9.12□□□□□ -0.95
C11orf88-203ENST00000529167 FAM163AQ96GL9 167 aaPredicted RBP9.12□□□□□ -0.95
C11orf88-203ENST00000529167 PLEKHA4Q9H4M7 779 aa9.12□□□□□ -0.95
C11orf88-203ENST00000529167 CD248Q9HCU0 757 aa9.12□□□□□ -0.95
C11orf88-203ENST00000529167 LIMCH1Q9UPQ0 1083 aa9.12□□□□□ -0.95
C11orf88-203ENST00000529167 ARFGEF1Q9Y6D6 1849 aa9.12□□□□□ -0.95
C11orf88-203ENST00000529167 NSD3Q9BZ95 1437 aa9.12□□□□□ -0.95
C11orf88-203ENST00000529167 TUBBP07437 444 aa9.12□□□□□ -0.95
C11orf88-203ENST00000529167 NAT1P18440 290 aa9.12□□□□□ -0.95
C11orf88-203ENST00000529167 SFPQP23246 707 aaKnown RBP eCLIP9.12□□□□□ -0.95
C11orf88-203ENST00000529167 HSPA4P34932 840 aa9.12□□□□□ -0.95
C11orf88-203ENST00000529167 TMPOP42166 694 aaKnown RBP9.12□□□□□ -0.95
C11orf88-203ENST00000529167 MAGEA8P43361 318 aa9.12□□□□□ -0.95
C11orf88-203ENST00000529167 HTRA3P83110 453 aa9.12□□□□□ -0.95
C11orf88-203ENST00000529167 PDIA5Q14554 519 aa9.12□□□□□ -0.95
C11orf88-203ENST00000529167 YTHDF3Q7Z739 585 aaKnown RBP9.12□□□□□ -0.95
C11orf88-203ENST00000529167 ANKRD44Q8N8A2 993 aa9.12□□□□□ -0.95
C11orf88-203ENST00000529167 CABP2Q9NPB3 220 aa9.12□□□□□ -0.95
C11orf88-203ENST00000529167 CASP8Q14790 479 aa9.11□□□□□ -0.95
C11orf88-203ENST00000529167 C11orf57Q6ZUT1 292 aaPredicted RBP9.11□□□□□ -0.95
C11orf88-203ENST00000529167 SPATS2Q86XZ4 545 aaKnown RBP9.11□□□□□ -0.95
C11orf88-203ENST00000529167 RPAP2Q8IXW5 612 aaPredicted RBP9.11□□□□□ -0.95
C11orf88-203ENST00000529167 SDR16C5Q8N3Y7 309 aa9.11□□□□□ -0.95
C11orf88-203ENST00000529167 TMX4Q9H1E5 349 aaPredicted RBP9.11□□□□□ -0.95
C11orf88-203ENST00000529167 TSPYL2Q9H2G4 693 aaPredicted RBP9.11□□□□□ -0.95
C11orf88-203ENST00000529167 RASSF9O75901 435 aa9.11□□□□□ -0.95
C11orf88-203ENST00000529167 SYF2O95926 243 aaKnown RBP9.11□□□□□ -0.95
C11orf88-203ENST00000529167 SMTNP53814 917 aa9.11□□□□□ -0.95
C11orf88-203ENST00000529167 PSMD2Q13200 908 aa9.11□□□□□ -0.95
C11orf88-203ENST00000529167 PLCB4Q15147 1175 aa9.11□□□□□ -0.95
C11orf88-203ENST00000529167 STX1AQ16623 288 aa9.11□□□□□ -0.95
C11orf88-203ENST00000529167 NOL8Q76FK4 1167 aaKnown RBP9.11□□□□□ -0.95
C11orf88-203ENST00000529167 UPF3BQ9BZI7 483 aaKnown RBP9.11□□□□□ -0.95
C11orf88-203ENST00000529167 BATF3Q9NR55 127 aa9.11□□□□□ -0.95
C11orf88-203ENST00000529167 NLRP2Q9NX02 1062 aa9.11□□□□□ -0.95
C11orf88-203ENST00000529167 VWA3AA6NCI4 1184 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms