RNA–Protein interactions for RNA: ENST00000528851.5

MS4A6A-208, Transcript of membrane spanning 4-domains A6A, human

TSL 1 (best) BASIC

Gene MS4A6A, Length 1,806 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MS4A6A-208	ENST00000528851	NOL10	Q9BSC4	688 aa	Known RBP	9.41	□□□□□ -0.9
MS4A6A-208	ENST00000528851	BCL11A	Q9H165	835 aa		9.41	□□□□□ -0.9
MS4A6A-208	ENST00000528851	ANTXR1	Q9H6X2	564 aa		9.41	□□□□□ -0.9
MS4A6A-208	ENST00000528851	GBA2	Q9HCG7	927 aa	Predicted RBP	9.41	□□□□□ -0.9
MS4A6A-208	ENST00000528851	PAG1	Q9NWQ8	432 aa		9.41	□□□□□ -0.9
MS4A6A-208	ENST00000528851	STAP2	Q9UGK3	403 aa		9.41	□□□□□ -0.9
MS4A6A-208	ENST00000528851	ARAP2	Q8WZ64	1704 aa		9.41	□□□□□ -0.9
MS4A6A-208	ENST00000528851	ZNF646	O15015	1829 aa	Predicted RBP	9.41	□□□□□ -0.9
MS4A6A-208	ENST00000528851	RASSF10	A6NK89	507 aa		9.4	□□□□□ -0.9
MS4A6A-208	ENST00000528851	TCP10L2	B9ZVM9	353 aa		9.4	□□□□□ -0.9
MS4A6A-208	ENST00000528851	ENTPD3	O75355	529 aa		9.4	□□□□□ -0.9
MS4A6A-208	ENST00000528851	IDH1	O75874	414 aa	Known RBP	9.4	□□□□□ -0.9
MS4A6A-208	ENST00000528851	GLRX3	O76003	335 aa	Known RBP	9.4	□□□□□ -0.9
MS4A6A-208	ENST00000528851	BTD	P43251	543 aa		9.4	□□□□□ -0.9
MS4A6A-208	ENST00000528851	NUCB1	Q02818	461 aa		9.4	□□□□□ -0.9
MS4A6A-208	ENST00000528851	DLK2	Q6UY11	383 aa		9.4	□□□□□ -0.9
MS4A6A-208	ENST00000528851	ZNF467	Q7Z7K2	595 aa	Predicted RBP	9.4	□□□□□ -0.9
MS4A6A-208	ENST00000528851	SAPCD2	Q86UD0	394 aa		9.4	□□□□□ -0.9
MS4A6A-208	ENST00000528851	CHD1L	Q86WJ1	897 aa		9.4	□□□□□ -0.9
MS4A6A-208	ENST00000528851	HOOK2	Q96ED9	719 aa		9.4	□□□□□ -0.9
MS4A6A-208	ENST00000528851	ZNF408	Q9H9D4	720 aa		9.4	□□□□□ -0.9
MS4A6A-208	ENST00000528851	AOX1	Q06278	1338 aa		9.4	□□□□□ -0.9
MS4A6A-208	ENST00000528851	GOLIM4	O00461	696 aa		9.4	□□□□□ -0.91
MS4A6A-208	ENST00000528851	MX1	P20591	662 aa		9.4	□□□□□ -0.91
MS4A6A-208	ENST00000528851	CYP7A1	P22680	504 aa		9.4	□□□□□ -0.91
MS4A6A-208	ENST00000528851	MAP3K11	Q16584	847 aa		9.4	□□□□□ -0.91
MS4A6A-208	ENST00000528851	PRAMEF18	Q5VWM3	479 aa		9.4	□□□□□ -0.91
MS4A6A-208	ENST00000528851	ARMC9	Q7Z3E5	817 aa		9.4	□□□□□ -0.91
MS4A6A-208	ENST00000528851	TICAM2	Q86XR7	235 aa		9.4	□□□□□ -0.91
MS4A6A-208	ENST00000528851	DNAJC2	Q99543	621 aa	Known RBP	9.4	□□□□□ -0.91
MS4A6A-208	ENST00000528851	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	9.4	□□□□□ -0.91
MS4A6A-208	ENST00000528851	ABT1	Q9ULW3	272 aa	Known RBP	9.4	□□□□□ -0.91
MS4A6A-208	ENST00000528851	SALL3	Q9BXA9	1300 aa		9.39	□□□□□ -0.91
MS4A6A-208	ENST00000528851	PPP1R12B	O60237	982 aa	Predicted RBP	9.39	□□□□□ -0.91
MS4A6A-208	ENST00000528851	PYGB	P11216	843 aa		9.39	□□□□□ -0.91
MS4A6A-208	ENST00000528851	ECE1	P42892	770 aa		9.39	□□□□□ -0.91
MS4A6A-208	ENST00000528851	RHBDL3	P58872	404 aa		9.39	□□□□□ -0.91
MS4A6A-208	ENST00000528851	UBE3C	Q15386	1083 aa		9.39	□□□□□ -0.91
MS4A6A-208	ENST00000528851	LRRFIP1	Q32MZ4	808 aa	Known RBP	9.39	□□□□□ -0.91
MS4A6A-208	ENST00000528851	SLC9C2	Q5TAH2	1124 aa		9.39	□□□□□ -0.91
MS4A6A-208	ENST00000528851	ERICH6B	Q5W0A0	696 aa		9.39	□□□□□ -0.91
MS4A6A-208	ENST00000528851	B4GALNT3	Q6L9W6	998 aa		9.39	□□□□□ -0.91
MS4A6A-208	ENST00000528851	TEPSIN	Q96N21	525 aa		9.39	□□□□□ -0.91
MS4A6A-208	ENST00000528851	OSBPL3	Q9H4L5	887 aa		9.39	□□□□□ -0.91
MS4A6A-208	ENST00000528851	PCDHB8	Q9UN66	801 aa		9.39	□□□□□ -0.91
MS4A6A-208	ENST00000528851	SCAF8	Q9UPN6	1271 aa	Known RBP	9.39	□□□□□ -0.91
MS4A6A-208	ENST00000528851	NDUFB9	Q9Y6M9	179 aa		9.39	□□□□□ -0.91
MS4A6A-208	ENST00000528851	NEFL	P07196	543 aa		9.38	□□□□□ -0.91
MS4A6A-208	ENST00000528851	PDE1A	P54750	535 aa		9.38	□□□□□ -0.91
MS4A6A-208	ENST00000528851	NBPF12	Q5TAG4	269 aa	Predicted RBP	9.38	□□□□□ -0.91
MS4A6A-208	ENST00000528851	MAGEB6	Q8N7X4	407 aa		9.38	□□□□□ -0.91
MS4A6A-208	ENST00000528851	PI4K2B	Q8TCG2	481 aa		9.38	□□□□□ -0.91
MS4A6A-208	ENST00000528851	KLRG1	Q96E93	195 aa		9.38	□□□□□ -0.91
MS4A6A-208	ENST00000528851	USP2	O75604	605 aa	Predicted RBP	9.38	□□□□□ -0.91
MS4A6A-208	ENST00000528851	ZFY	P08048	801 aa	Predicted RBP	9.38	□□□□□ -0.91
MS4A6A-208	ENST00000528851	CACNB3	P54284	484 aa		9.38	□□□□□ -0.91
MS4A6A-208	ENST00000528851	HUNK	P57058	714 aa		9.38	□□□□□ -0.91
MS4A6A-208	ENST00000528851	HTRA3	P83110	453 aa		9.38	□□□□□ -0.91
MS4A6A-208	ENST00000528851	LDLRAD1	Q5T700	205 aa		9.38	□□□□□ -0.91
MS4A6A-208	ENST00000528851	RGMB	Q6NW40	437 aa		9.38	□□□□□ -0.91
MS4A6A-208	ENST00000528851	KBTBD3	Q8NAB2	608 aa		9.38	□□□□□ -0.91
MS4A6A-208	ENST00000528851	CCDC102A	Q96A19	550 aa		9.38	□□□□□ -0.91
MS4A6A-208	ENST00000528851	LNPK	Q9C0E8	428 aa		9.38	□□□□□ -0.91
MS4A6A-208	ENST00000528851	TMEM39B	Q9GZU3	492 aa		9.38	□□□□□ -0.91
MS4A6A-208	ENST00000528851	AATF	Q9NY61	560 aa	Known RBP eCLIP	9.38	□□□□□ -0.91
MS4A6A-208	ENST00000528851	FAM198A	Q9UFP1	575 aa		9.38	□□□□□ -0.91
MS4A6A-208	ENST00000528851	CNTNAP1	P78357	1384 aa		9.37	□□□□□ -0.91
MS4A6A-208	ENST00000528851	WDHD1	O75717	1129 aa	Predicted RBP	9.37	□□□□□ -0.91
MS4A6A-208	ENST00000528851	PDE6A	P16499	860 aa		9.37	□□□□□ -0.91
MS4A6A-208	ENST00000528851	ADD2	P35612	726 aa		9.37	□□□□□ -0.91
MS4A6A-208	ENST00000528851	IREB2	P48200	963 aa	Known RBP	9.37	□□□□□ -0.91
MS4A6A-208	ENST00000528851	RGS3	P49796	1198 aa		9.37	□□□□□ -0.91
MS4A6A-208	ENST00000528851	MAP3K10	Q02779	954 aa		9.37	□□□□□ -0.91
MS4A6A-208	ENST00000528851	NFIA	Q12857	509 aa		9.37	□□□□□ -0.91
MS4A6A-208	ENST00000528851	TTLL12	Q14166	644 aa	Predicted RBP	9.37	□□□□□ -0.91
MS4A6A-208	ENST00000528851	DCAF15	Q66K64	600 aa		9.37	□□□□□ -0.91
MS4A6A-208	ENST00000528851	PLEKHM2	Q8IWE5	1019 aa		9.37	□□□□□ -0.91
MS4A6A-208	ENST00000528851	TEX11	Q8IYF3	940 aa		9.37	□□□□□ -0.91
MS4A6A-208	ENST00000528851	OTUD7A	Q8TE49	926 aa	Predicted RBP	9.37	□□□□□ -0.91
MS4A6A-208	ENST00000528851	EDC3	Q96F86	508 aa	Known RBP	9.37	□□□□□ -0.91
MS4A6A-208	ENST00000528851	ZNF532	Q9HCE3	1301 aa		9.36	□□□□□ -0.91
MS4A6A-208	ENST00000528851	MAGEB6P1	A0A0J9YX57	407 aa		9.36	□□□□□ -0.91
MS4A6A-208	ENST00000528851	TCRBV5S4A2T	A0A5A2	114 aa		9.36	□□□□□ -0.91
MS4A6A-208	ENST00000528851	MAP3K9	P80192	1104 aa		9.36	□□□□□ -0.91
MS4A6A-208	ENST00000528851	ADGRA1	Q86SQ6	560 aa		9.36	□□□□□ -0.91
MS4A6A-208	ENST00000528851	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	9.36	□□□□□ -0.91
MS4A6A-208	ENST00000528851	RNF166	Q96A37	237 aa	Predicted RBP	9.36	□□□□□ -0.91
MS4A6A-208	ENST00000528851	EVI5L	Q96CN4	794 aa		9.36	□□□□□ -0.91
MS4A6A-208	ENST00000528851	DHX36	Q9H2U1	1008 aa	Known RBP	9.36	□□□□□ -0.91
MS4A6A-208	ENST00000528851	MKRN1	Q9UHC7	482 aa	Known RBP	9.36	□□□□□ -0.91
MS4A6A-208	ENST00000528851	ANGEL1	Q9UNK9	670 aa	Known RBP	9.36	□□□□□ -0.91
MS4A6A-208	ENST00000528851	RPAP1	Q9BWH6	1393 aa	Predicted RBP	9.36	□□□□□ -0.91
MS4A6A-208	ENST00000528851	WDR33	Q9C0J8	1336 aa	Known RBP	9.36	□□□□□ -0.91
MS4A6A-208	ENST00000528851	UBE2Q2L	H0YL09	131 aa		9.35	□□□□□ -0.91
MS4A6A-208	ENST00000528851	RNF113A	O15541	343 aa	Known RBP	9.35	□□□□□ -0.91
MS4A6A-208	ENST00000528851	TBC1D12	O60347	775 aa		9.35	□□□□□ -0.91
MS4A6A-208	ENST00000528851	MAP2K2	P36507	400 aa		9.35	□□□□□ -0.91
MS4A6A-208	ENST00000528851	VEGFB	P49765	207 aa		9.35	□□□□□ -0.91
MS4A6A-208	ENST00000528851	ZNF157	P51786	506 aa	Predicted RBP	9.35	□□□□□ -0.91
MS4A6A-208	ENST00000528851	DYNLL1	P63167	89 aa	Known RBP	9.35	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms