RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 DDX4Q9NQI0 724 aaKnown RBP17.42■□□□□ 0.38
CAPN1-216ENST00000528739 RPAP1Q9BWH6 1393 aaPredicted RBP17.41■□□□□ 0.38
CAPN1-216ENST00000528739 WDHD1O75717 1129 aaPredicted RBP17.41■□□□□ 0.38
CAPN1-216ENST00000528739 INPP5BP32019 993 aa17.41■□□□□ 0.38
CAPN1-216ENST00000528739 GTF2A2P52657 109 aa17.41■□□□□ 0.38
CAPN1-216ENST00000528739 MAP3K12Q12852 859 aa17.41■□□□□ 0.38
CAPN1-216ENST00000528739 ERO1BQ86YB8 467 aa17.41■□□□□ 0.38
CAPN1-216ENST00000528739 SH3RF3Q8TEJ3 882 aaPredicted RBP17.41■□□□□ 0.38
CAPN1-216ENST00000528739 CCL15-CCL14A0A0B4J2E2 113 aa17.4■□□□□ 0.38
CAPN1-216ENST00000528739 DDTLA6NHG4 134 aaPredicted RBP17.4■□□□□ 0.38
CAPN1-216ENST00000528739 PLCG2P16885 1265 aa17.4■□□□□ 0.38
CAPN1-216ENST00000528739 RHBDL3P58872 404 aa17.4■□□□□ 0.38
CAPN1-216ENST00000528739 CCL15Q16663 113 aa17.4■□□□□ 0.38
CAPN1-216ENST00000528739 MAGEB6Q8N7X4 407 aa17.4■□□□□ 0.38
CAPN1-216ENST00000528739 LRRCC1Q9C099 1032 aa17.4■□□□□ 0.38
CAPN1-216ENST00000528739 ANTXR1Q9H6X2 564 aa17.4■□□□□ 0.38
CAPN1-216ENST00000528739 SNCAIPQ9Y6H5 919 aa17.4■□□□□ 0.38
CAPN1-216ENST00000528739 MYH2Q9UKX2 1941 aa17.39■□□□□ 0.37
CAPN1-216ENST00000528739 SPDYE5A6NIY4 337 aa17.39■□□□□ 0.37
CAPN1-216ENST00000528739 IGF2BP3O00425 579 aaKnown RBP eCLIP17.39■□□□□ 0.37
CAPN1-216ENST00000528739 SMARCA5O60264 1052 aaPredicted RBP17.39■□□□□ 0.37
CAPN1-216ENST00000528739 MAP4K4O95819 1239 aaPredicted RBP17.39■□□□□ 0.37
CAPN1-216ENST00000528739 TTF1Q15361 905 aaPredicted RBP17.39■□□□□ 0.37
CAPN1-216ENST00000528739 TGFBRAP1Q8WUH2 860 aa17.39■□□□□ 0.37
CAPN1-216ENST00000528739 MCOLN1Q9GZU1 580 aa17.39■□□□□ 0.37
CAPN1-216ENST00000528739 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.39■□□□□ 0.37
CAPN1-216ENST00000528739 PICK1Q9NRD5 415 aa17.39■□□□□ 0.37
CAPN1-216ENST00000528739 GPR25O00155 361 aa17.38■□□□□ 0.37
CAPN1-216ENST00000528739 GOLIM4O00461 696 aa17.38■□□□□ 0.37
CAPN1-216ENST00000528739 SNAPC2Q13487 334 aa17.38■□□□□ 0.37
CAPN1-216ENST00000528739 SH3BP5LQ7L8J4 393 aa17.38■□□□□ 0.37
CAPN1-216ENST00000528739 MAPKAPK5Q8IW41 473 aa17.38■□□□□ 0.37
CAPN1-216ENST00000528739 MIGA1Q8NAN2 632 aa17.38■□□□□ 0.37
CAPN1-216ENST00000528739 ZNF296Q8WUU4 475 aaPredicted RBP17.38■□□□□ 0.37
CAPN1-216ENST00000528739 TRIM34Q9BYJ4 488 aa17.38■□□□□ 0.37
CAPN1-216ENST00000528739 BOLA2Q9H3K6 86 aa17.38■□□□□ 0.37
CAPN1-216ENST00000528739 AK9Q5TCS8 1911 aa17.38■□□□□ 0.37
CAPN1-216ENST00000528739 AKAP11Q9UKA4 1901 aa17.37■□□□□ 0.37
CAPN1-216ENST00000528739 CCDC85CA6NKD9 419 aa17.37■□□□□ 0.37
CAPN1-216ENST00000528739 IRF6O14896 467 aa17.37■□□□□ 0.37
CAPN1-216ENST00000528739 CETPP11597 493 aa17.37■□□□□ 0.37
CAPN1-216ENST00000528739 DYNLL1P63167 89 aaKnown RBP17.37■□□□□ 0.37
CAPN1-216ENST00000528739 PPATQ06203 517 aa17.37■□□□□ 0.37
CAPN1-216ENST00000528739 ADGRA1Q86SQ6 560 aa17.37■□□□□ 0.37
CAPN1-216ENST00000528739 ABHD8Q96I13 439 aa17.37■□□□□ 0.37
CAPN1-216ENST00000528739 CRBNQ96SW2 442 aa17.37■□□□□ 0.37
CAPN1-216ENST00000528739 OSBPL5Q9H0X9 879 aaPredicted RBP17.37■□□□□ 0.37
CAPN1-216ENST00000528739 FKTNO75072 461 aa17.36■□□□□ 0.37
CAPN1-216ENST00000528739 SLURP2P0DP57 97 aa17.36■□□□□ 0.37
CAPN1-216ENST00000528739 USP5P45974 858 aa17.36■□□□□ 0.37
CAPN1-216ENST00000528739 PPIL2Q13356 520 aa17.36■□□□□ 0.37
CAPN1-216ENST00000528739 BRI3BPQ8WY22 251 aa17.36■□□□□ 0.37
CAPN1-216ENST00000528739 MS4A4AQ96JQ5 239 aa17.36■□□□□ 0.37
CAPN1-216ENST00000528739 PTPN18Q99952 460 aa17.36■□□□□ 0.37
CAPN1-216ENST00000528739 R3HDMLQ9H3Y0 253 aa17.36■□□□□ 0.37
CAPN1-216ENST00000528739 ZBTB47Q9UFB7 747 aaPredicted RBP17.36■□□□□ 0.37
CAPN1-216ENST00000528739 ZNF112Q9UJU3 913 aa17.36■□□□□ 0.37
CAPN1-216ENST00000528739 FAM196BA6NMK8 535 aa17.35■□□□□ 0.37
CAPN1-216ENST00000528739 IGSF3O75054 1194 aa17.35■□□□□ 0.37
CAPN1-216ENST00000528739 PPP4CP60510 307 aa17.35■□□□□ 0.37
CAPN1-216ENST00000528739 TAF1CQ15572 869 aaPredicted RBP17.35■□□□□ 0.37
CAPN1-216ENST00000528739 SLC4A8Q2Y0W8 1093 aa17.35■□□□□ 0.37
CAPN1-216ENST00000528739 SLC9C2Q5TAH2 1124 aa17.35■□□□□ 0.37
CAPN1-216ENST00000528739 ZFYVE28Q9HCC9 887 aa17.35■□□□□ 0.37
CAPN1-216ENST00000528739 SAP30BPQ9UHR5 308 aaKnown RBP17.35■□□□□ 0.37
CAPN1-216ENST00000528739 CASP8AP2Q9UKL3 1982 aa17.35■□□□□ 0.37
CAPN1-216ENST00000528739 TESPA1A2RU30 521 aaPredicted RBP17.34■□□□□ 0.37
CAPN1-216ENST00000528739 NPM3O75607 178 aaKnown RBP17.34■□□□□ 0.37
CAPN1-216ENST00000528739 CRHR2Q13324 411 aa17.34■□□□□ 0.37
CAPN1-216ENST00000528739 CTU1Q7Z7A3 348 aaKnown RBP17.34■□□□□ 0.37
CAPN1-216ENST00000528739 SCYL3Q8IZE3 742 aa17.34■□□□□ 0.37
CAPN1-216ENST00000528739 CRACR2BQ8N4Y2 399 aaPredicted RBP17.34■□□□□ 0.37
CAPN1-216ENST00000528739 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.34■□□□□ 0.37
CAPN1-216ENST00000528739 GPATCH3Q96I76 525 aa17.34■□□□□ 0.37
CAPN1-216ENST00000528739 DCTPP1Q9H773 170 aa17.34■□□□□ 0.37
CAPN1-216ENST00000528739 PCDHB15Q9Y5E8 787 aa17.34■□□□□ 0.37
CAPN1-216ENST00000528739 ZHX2Q9Y6X8 837 aa17.34■□□□□ 0.37
CAPN1-216ENST00000528739 RFX7Q2KHR2 1363 aa17.33■□□□□ 0.36
CAPN1-216ENST00000528739 PHF20L1A8MW92 1017 aa17.33■□□□□ 0.36
CAPN1-216ENST00000528739 CTNND1O60716 968 aaKnown RBP17.33■□□□□ 0.36
CAPN1-216ENST00000528739 HLA-DOAP06340 250 aa17.33■□□□□ 0.36
CAPN1-216ENST00000528739 NOL9Q5SY16 702 aaKnown RBP17.33■□□□□ 0.36
CAPN1-216ENST00000528739 EDC3Q96F86 508 aaKnown RBP17.33■□□□□ 0.36
CAPN1-216ENST00000528739 DHX36Q9H2U1 1008 aaKnown RBP17.33■□□□□ 0.36
CAPN1-216ENST00000528739 PAG1Q9NWQ8 432 aa17.33■□□□□ 0.36
CAPN1-216ENST00000528739 PI4KBQ9UBF8 816 aa17.33■□□□□ 0.36
CAPN1-216ENST00000528739 PALD1Q9ULE6 856 aa17.33■□□□□ 0.36
CAPN1-216ENST00000528739 FLT1P17948 1338 aa17.32■□□□□ 0.36
CAPN1-216ENST00000528739 MAGEB6P1A0A0J9YX57 407 aa17.32■□□□□ 0.36
CAPN1-216ENST00000528739 BTBD19C9JJ37 291 aa17.32■□□□□ 0.36
CAPN1-216ENST00000528739 ATP5JP18859 108 aa17.32■□□□□ 0.36
CAPN1-216ENST00000528739 CERS3Q8IU89 383 aa17.32■□□□□ 0.36
CAPN1-216ENST00000528739 FAM43AQ8N2R8 423 aa17.32■□□□□ 0.36
CAPN1-216ENST00000528739 CFHR5Q9BXR6 569 aa17.32■□□□□ 0.36
CAPN1-216ENST00000528739 ZNF532Q9HCE3 1301 aa17.31■□□□□ 0.36
CAPN1-216ENST00000528739 TBC1D12O60347 775 aa17.31■□□□□ 0.36
CAPN1-216ENST00000528739 PDE6AP16499 860 aa17.31■□□□□ 0.36
CAPN1-216ENST00000528739 PTPRAP18433 802 aa17.31■□□□□ 0.36
CAPN1-216ENST00000528739 GADL1Q6ZQY3 521 aa17.31■□□□□ 0.36
CAPN1-216ENST00000528739 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.31■□□□□ 0.364e-8■■■■□ 22.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms