RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 IRS4O14654 1257 aaPredicted RBP20.34■□□□□ 0.85
LTBP3-210ENST00000528516 SLIT1O75093 1534 aa20.33■□□□□ 0.85
LTBP3-210ENST00000528516 EYA2O00167 538 aa20.33■□□□□ 0.85
LTBP3-210ENST00000528516 WTAPQ15007 396 aa20.33■□□□□ 0.85
LTBP3-210ENST00000528516 RABGGTAQ92696 567 aa20.33■□□□□ 0.85
LTBP3-210ENST00000528516 XAGE2Q96GT9 111 aa20.33■□□□□ 0.85
LTBP3-210ENST00000528516 NUP88Q99567 741 aaPredicted RBP20.33■□□□□ 0.85
LTBP3-210ENST00000528516 BAG1Q99933 345 aaPredicted RBP20.33■□□□□ 0.85
LTBP3-210ENST00000528516 WWC3Q9ULE0 1092 aa20.33■□□□□ 0.85
LTBP3-210ENST00000528516 FAM170AA1A519 330 aa20.33■□□□□ 0.84
LTBP3-210ENST00000528516 IDEP14735 1019 aa20.33■□□□□ 0.84
LTBP3-210ENST00000528516 RBM5P52756 815 aaKnown RBP eCLIP20.33■□□□□ 0.84
LTBP3-210ENST00000528516 PPARDQ03181 441 aa20.33■□□□□ 0.84
LTBP3-210ENST00000528516 PACS2Q86VP3 889 aa20.33■□□□□ 0.84
LTBP3-210ENST00000528516 EEF2KMTQ96G04 330 aa20.33■□□□□ 0.84
LTBP3-210ENST00000528516 NCAPGQ9BPX3 1015 aa20.33■□□□□ 0.84
LTBP3-210ENST00000528516 RCOR1Q9UKL0 485 aa20.33■□□□□ 0.84
LTBP3-210ENST00000528516 RABEP2Q9H5N1 569 aa20.33■□□□□ 0.84
LTBP3-210ENST00000528516 PCDHA7Q9UN72 937 aa20.33■□□□□ 0.84
LTBP3-210ENST00000528516 TSPY2A6NKD2 308 aa20.32■□□□□ 0.84
LTBP3-210ENST00000528516 SNAP23O00161 211 aa20.32■□□□□ 0.84
LTBP3-210ENST00000528516 CAVIN4Q5BKX8 364 aa20.32■□□□□ 0.84
LTBP3-210ENST00000528516 KBTBD3Q8NAB2 608 aa20.32■□□□□ 0.84
LTBP3-210ENST00000528516 DCAF5Q96JK2 942 aa20.32■□□□□ 0.84
LTBP3-210ENST00000528516 RUFY1Q96T51 708 aa20.32■□□□□ 0.84
LTBP3-210ENST00000528516 FUT8Q9BYC5 575 aa20.32■□□□□ 0.84
LTBP3-210ENST00000528516 YY1AP1Q9H869 796 aa20.32■□□□□ 0.84
LTBP3-210ENST00000528516 SLC52A2Q9HAB3 445 aa20.32■□□□□ 0.84
LTBP3-210ENST00000528516 GPAA1O43292 621 aa20.32■□□□□ 0.84
LTBP3-210ENST00000528516 IBSPP21815 317 aaPredicted RBP20.32■□□□□ 0.84
LTBP3-210ENST00000528516 MATR3P43243 847 aaKnown RBP eCLIP20.32■□□□□ 0.84
LTBP3-210ENST00000528516 SETQ01105 290 aaPredicted RBP20.32■□□□□ 0.84
LTBP3-210ENST00000528516 REXO1L1PQ8IX06 675 aa20.32■□□□□ 0.84
LTBP3-210ENST00000528516 CEP89Q96ST8 783 aa20.32■□□□□ 0.84
LTBP3-210ENST00000528516 SASH1O94885 1247 aa20.32■□□□□ 0.84
LTBP3-210ENST00000528516 GUCY2CP25092 1073 aa20.32■□□□□ 0.84
LTBP3-210ENST00000528516 EPHA10Q5JZY3 1008 aa20.32■□□□□ 0.84
LTBP3-210ENST00000528516 MEX3CQ5U5Q3 659 aaKnown RBP20.32■□□□□ 0.84
LTBP3-210ENST00000528516 DZIP1Q86YF9 867 aaKnown RBP20.32■□□□□ 0.84
LTBP3-210ENST00000528516 KCNJ14Q9UNX9 436 aa20.32■□□□□ 0.84
LTBP3-210ENST00000528516 H0YHG0 523 aa20.31■□□□□ 0.84
LTBP3-210ENST00000528516 MBD4O95243 580 aa20.31■□□□□ 0.84
LTBP3-210ENST00000528516 MTX1Q13505 466 aa20.31■□□□□ 0.84
LTBP3-210ENST00000528516 GOLGA6L9A6NEM1 432 aa20.31■□□□□ 0.84
LTBP3-210ENST00000528516 CYP21A2P08686 494 aa20.31■□□□□ 0.84
LTBP3-210ENST00000528516 CCDC91Q7Z6B0 441 aa20.31■□□□□ 0.84
LTBP3-210ENST00000528516 ARMT1Q9H993 441 aa20.31■□□□□ 0.84
LTBP3-210ENST00000528516 ARHGAP6O43182 974 aa20.31■□□□□ 0.84
LTBP3-210ENST00000528516 ADKP55263 362 aaKnown RBP20.31■□□□□ 0.84
LTBP3-210ENST00000528516 KIAA1328Q86T90 577 aa20.31■□□□□ 0.84
LTBP3-210ENST00000528516 ZNHIT6Q9NWK9 470 aaKnown RBP20.31■□□□□ 0.84
LTBP3-210ENST00000528516 NIP7Q9Y221 180 aaKnown RBP eCLIP20.31■□□□□ 0.84
LTBP3-210ENST00000528516 N4BP1O75113 896 aaKnown RBP20.3■□□□□ 0.84
LTBP3-210ENST00000528516 CTDSPL2Q05D32 466 aa20.3■□□□□ 0.84
LTBP3-210ENST00000528516 TRMT44Q8IYL2 757 aaKnown RBP20.3■□□□□ 0.84
LTBP3-210ENST00000528516 TMEM94Q12767 1356 aa20.3■□□□□ 0.84
LTBP3-210ENST00000528516 CCDC151A5D8V7 595 aa20.3■□□□□ 0.84
LTBP3-210ENST00000528516 SOGA3Q5TF21 947 aa20.3■□□□□ 0.84
LTBP3-210ENST00000528516 CDK12Q9NYV4 1490 aaPredicted RBP20.3■□□□□ 0.84
LTBP3-210ENST00000528516 KIF5CO60282 957 aa20.3■□□□□ 0.84
LTBP3-210ENST00000528516 SCRN1Q12765 414 aa20.3■□□□□ 0.84
LTBP3-210ENST00000528516 DACH1Q9UI36 760 aa20.3■□□□□ 0.84
LTBP3-210ENST00000528516 DIP2AQ14689 1571 aa20.3■□□□□ 0.84
LTBP3-210ENST00000528516 N4BP3O15049 544 aa20.29■□□□□ 0.84
LTBP3-210ENST00000528516 ADORA1P30542 326 aa20.29■□□□□ 0.84
LTBP3-210ENST00000528516 BRD3Q15059 726 aa20.29■□□□□ 0.84
LTBP3-210ENST00000528516 RTN1Q16799 776 aa20.29■□□□□ 0.84
LTBP3-210ENST00000528516 ZNF827Q17R98 1081 aa20.29■□□□□ 0.84
LTBP3-210ENST00000528516 CADPS2Q86UW7 1296 aa20.29■□□□□ 0.84
LTBP3-210ENST00000528516 KCNG4Q8TDN1 519 aa20.29■□□□□ 0.84
LTBP3-210ENST00000528516 E7EWF7 191 aa20.29■□□□□ 0.84
LTBP3-210ENST00000528516 ITGA6P23229 1130 aa20.29■□□□□ 0.84
LTBP3-210ENST00000528516 NLRP12P59046 1061 aa20.29■□□□□ 0.84
LTBP3-210ENST00000528516 SUGCTQ9HAC7 445 aa20.29■□□□□ 0.84
LTBP3-210ENST00000528516 CABP5Q9NP86 173 aa20.29■□□□□ 0.84
LTBP3-210ENST00000528516 F8W031 263 aaPredicted RBP20.29■□□□□ 0.84
LTBP3-210ENST00000528516 MPHOSPH10O00566 681 aaKnown RBP20.29■□□□□ 0.84
LTBP3-210ENST00000528516 DZIP3Q86Y13 1208 aaKnown RBP20.29■□□□□ 0.84
LTBP3-210ENST00000528516 WASF1Q92558 559 aa20.29■□□□□ 0.84
LTBP3-210ENST00000528516 SMARCC1Q92922 1105 aaPredicted RBP20.29■□□□□ 0.84
LTBP3-210ENST00000528516 ZNF202O95125 648 aa20.28■□□□□ 0.84
LTBP3-210ENST00000528516 FKBP15Q5T1M5 1219 aa20.28■□□□□ 0.84
LTBP3-210ENST00000528516 COBLO75128 1261 aa20.28■□□□□ 0.84
LTBP3-210ENST00000528516 LIG3P49916 1009 aa20.28■□□□□ 0.84
LTBP3-210ENST00000528516 TRIM65Q6PJ69 517 aa20.28■□□□□ 0.84
LTBP3-210ENST00000528516 DPF2Q92785 391 aa20.28■□□□□ 0.84
LTBP3-210ENST00000528516 TMEM232C9JQI7 657 aa20.28■□□□□ 0.84
LTBP3-210ENST00000528516 MYL5Q02045 173 aa20.28■□□□□ 0.84
LTBP3-210ENST00000528516 CATIPQ7Z7H3 387 aa20.28■□□□□ 0.84
LTBP3-210ENST00000528516 BANK1Q8NDB2 785 aa20.28■□□□□ 0.84
LTBP3-210ENST00000528516 MKRN1Q9UHC7 482 aaKnown RBP20.28■□□□□ 0.84
LTBP3-210ENST00000528516 IGSF1Q8N6C5 1336 aa20.27■□□□□ 0.84
LTBP3-210ENST00000528516 CCDC196A0A1B0GTZ2 297 aa20.27■□□□□ 0.84
LTBP3-210ENST00000528516 ATP6V1AP38606 617 aa20.27■□□□□ 0.84
LTBP3-210ENST00000528516 DNAJC21Q5F1R6 531 aaKnown RBP20.27■□□□□ 0.84
LTBP3-210ENST00000528516 KCNQ4P56696 695 aa20.27■□□□□ 0.83
LTBP3-210ENST00000528516 POLA2Q14181 598 aa20.26■□□□□ 0.83
LTBP3-210ENST00000528516 LONRF3Q496Y0 759 aa20.26■□□□□ 0.83
LTBP3-210ENST00000528516 ZNF569Q5MCW4 686 aa20.26■□□□□ 0.83
LTBP3-210ENST00000528516 IRX2Q9BZI1 471 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms