RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 RCAN3Q9UKA8 241 aa17.05■□□□□ 0.32
CHRDL2-205ENST00000528471 PTPRFP10586 1907 aa17.04■□□□□ 0.32
CHRDL2-205ENST00000528471 GPR75-ASB3A0A0A6YYF3 556 aa17.04■□□□□ 0.32
CHRDL2-205ENST00000528471 IRF6O14896 467 aa17.04■□□□□ 0.32
CHRDL2-205ENST00000528471 TAF1CQ15572 869 aaPredicted RBP17.04■□□□□ 0.32
CHRDL2-205ENST00000528471 ERC1Q8IUD2 1116 aa17.04■□□□□ 0.32
CHRDL2-205ENST00000528471 ERO1AQ96HE7 468 aa17.04■□□□□ 0.32
CHRDL2-205ENST00000528471 DDX19BQ9UMR2 479 aa17.04■□□□□ 0.32
CHRDL2-205ENST00000528471 PPATQ06203 517 aa17.03■□□□□ 0.32
CHRDL2-205ENST00000528471 FBXO46Q6PJ61 603 aaPredicted RBP17.03■□□□□ 0.32
CHRDL2-205ENST00000528471 ZNF384Q8TF68 577 aa17.03■□□□□ 0.32
CHRDL2-205ENST00000528471 ZFYVE28Q9HCC9 887 aa17.03■□□□□ 0.32
CHRDL2-205ENST00000528471 ZNF112Q9UJU3 913 aa17.03■□□□□ 0.32
CHRDL2-205ENST00000528471 DBNLQ9UJU6 430 aaKnown RBP17.03■□□□□ 0.32
CHRDL2-205ENST00000528471 HPS5Q9UPZ3 1129 aa17.03■□□□□ 0.32
CHRDL2-205ENST00000528471 EXOC6BQ9Y2D4 811 aa17.03■□□□□ 0.32
CHRDL2-205ENST00000528471 ATRNL1Q5VV63 1379 aa17.02■□□□□ 0.32
CHRDL2-205ENST00000528471 MAP4K4O95819 1239 aaPredicted RBP17.02■□□□□ 0.32
CHRDL2-205ENST00000528471 RHBDL3P58872 404 aa17.02■□□□□ 0.32
CHRDL2-205ENST00000528471 HSP90AB4PQ58FF6 505 aa17.02■□□□□ 0.32
CHRDL2-205ENST00000528471 FAM43AQ8N2R8 423 aa17.02■□□□□ 0.32
CHRDL2-205ENST00000528471 CCDC8Q9H0W5 538 aaPredicted RBP17.02■□□□□ 0.32
CHRDL2-205ENST00000528471 DDX4Q9NQI0 724 aaKnown RBP17.02■□□□□ 0.32
CHRDL2-205ENST00000528471 COG6Q9Y2V7 657 aa17.02■□□□□ 0.32
CHRDL2-205ENST00000528471 TRIM17Q9Y577 477 aa17.02■□□□□ 0.32
CHRDL2-205ENST00000528471 PHIPQ8WWQ0 1821 aa17.02■□□□□ 0.32
CHRDL2-205ENST00000528471 SP3Q02447 781 aa17.01■□□□□ 0.31
CHRDL2-205ENST00000528471 MLLT1Q03111 559 aaPredicted RBP17.01■□□□□ 0.31
CHRDL2-205ENST00000528471 NOL9Q5SY16 702 aaKnown RBP17.01■□□□□ 0.31
CHRDL2-205ENST00000528471 NAA16Q6N069 864 aaPredicted RBP17.01■□□□□ 0.31
CHRDL2-205ENST00000528471 SH3BP5LQ7L8J4 393 aa17.01■□□□□ 0.31
CHRDL2-205ENST00000528471 TEX11Q8IYF3 940 aa17.01■□□□□ 0.31
CHRDL2-205ENST00000528471 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.01■□□□□ 0.31
CHRDL2-205ENST00000528471 ZNF512BQ96KM6 892 aaPredicted RBP17.01■□□□□ 0.31
CHRDL2-205ENST00000528471 CHMP4BQ9H444 224 aaKnown RBP17.01■□□□□ 0.31
CHRDL2-205ENST00000528471 PICK1Q9NRD5 415 aa17.01■□□□□ 0.31
CHRDL2-205ENST00000528471 TLR7Q9NYK1 1049 aaKnown RBP17.01■□□□□ 0.31
CHRDL2-205ENST00000528471 MYH1P12882 1939 aa17■□□□□ 0.31
CHRDL2-205ENST00000528471 DDTLA6NHG4 134 aaPredicted RBP17■□□□□ 0.31
CHRDL2-205ENST00000528471 HMMRO75330 724 aa17■□□□□ 0.31
CHRDL2-205ENST00000528471 SOX10P56693 466 aa17■□□□□ 0.31
CHRDL2-205ENST00000528471 CD99L2Q8TCZ2 262 aa17■□□□□ 0.31
CHRDL2-205ENST00000528471 EAF2Q96CJ1 260 aaPredicted RBP17■□□□□ 0.31
CHRDL2-205ENST00000528471 ZCCHC17Q9NP64 241 aaKnown RBP17■□□□□ 0.31
CHRDL2-205ENST00000528471 COL2A1P02458 1487 aaPredicted RBP17■□□□□ 0.31
CHRDL2-205ENST00000528471 BTBD19C9JJ37 291 aa16.99■□□□□ 0.31
CHRDL2-205ENST00000528471 NPM3O75607 178 aaKnown RBP16.99■□□□□ 0.31
CHRDL2-205ENST00000528471 BAG3O95817 575 aa16.99■□□□□ 0.31
CHRDL2-205ENST00000528471 CYP2E1P05181 493 aaPredicted RBP16.99■□□□□ 0.31
CHRDL2-205ENST00000528471 ZAP70P43403 619 aa16.99■□□□□ 0.31
CHRDL2-205ENST00000528471 RGS19P49795 217 aa16.99■□□□□ 0.31
CHRDL2-205ENST00000528471 OTOP1Q7RTM1 612 aa16.99■□□□□ 0.31
CHRDL2-205ENST00000528471 AACSQ86V21 672 aa16.99■□□□□ 0.31
CHRDL2-205ENST00000528471 SCYL3Q8IZE3 742 aa16.99■□□□□ 0.31
CHRDL2-205ENST00000528471 ZSWIM8A7E2V4 1837 aa16.99■□□□□ 0.31
CHRDL2-205ENST00000528471 HTTP42858 3142 aa16.98■□□□□ 0.31
CHRDL2-205ENST00000528471 PHF20L1A8MW92 1017 aa16.98■□□□□ 0.31
CHRDL2-205ENST00000528471 PLCG2P16885 1265 aa16.98■□□□□ 0.31
CHRDL2-205ENST00000528471 RPAP2Q8IXW5 612 aaPredicted RBP16.98■□□□□ 0.31
CHRDL2-205ENST00000528471 SH3RF3Q8TEJ3 882 aaPredicted RBP16.98■□□□□ 0.31
CHRDL2-205ENST00000528471 OSBPL5Q9H0X9 879 aaPredicted RBP16.98■□□□□ 0.31
CHRDL2-205ENST00000528471 EFCC1Q9HA90 598 aa16.98■□□□□ 0.31
CHRDL2-205ENST00000528471 AATFQ9NY61 560 aaKnown RBP eCLIP16.98■□□□□ 0.31
CHRDL2-205ENST00000528471 KCNH4Q9UQ05 1017 aa16.98■□□□□ 0.31
CHRDL2-205ENST00000528471 SIPA1L1O43166 1804 aa16.98■□□□□ 0.31
CHRDL2-205ENST00000528471 PDE4DIPQ5VU43 2346 aa16.98■□□□□ 0.31
CHRDL2-205ENST00000528471 APBB1O00213 710 aa16.97■□□□□ 0.31
CHRDL2-205ENST00000528471 IGSF3O75054 1194 aa16.97■□□□□ 0.31
CHRDL2-205ENST00000528471 ARHGEF6Q15052 776 aa16.97■□□□□ 0.31
CHRDL2-205ENST00000528471 IL1RAPL2Q9NP60 686 aa16.97■□□□□ 0.31
CHRDL2-205ENST00000528471 PIH1D3Q9NQM4 214 aaKnown RBP16.97■□□□□ 0.31
CHRDL2-205ENST00000528471 ZBTB40Q9NUA8 1239 aa16.97■□□□□ 0.31
CHRDL2-205ENST00000528471 IDH1O75874 414 aaKnown RBP16.96■□□□□ 0.31
CHRDL2-205ENST00000528471 ANKRD23Q86SG2 305 aa16.96■□□□□ 0.31
CHRDL2-205ENST00000528471 RHPN1Q8TCX5 695 aa16.96■□□□□ 0.31
CHRDL2-205ENST00000528471 BCL11AQ9H165 835 aa16.96■□□□□ 0.31
CHRDL2-205ENST00000528471 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.96■□□□□ 0.31
CHRDL2-205ENST00000528471 ZHX2Q9Y6X8 837 aa16.96■□□□□ 0.31
CHRDL2-205ENST00000528471 CENPFP49454 3210 aa16.96■□□□□ 0.31
CHRDL2-205ENST00000528471 MGAMO43451 1857 aa16.96■□□□□ 0.31
CHRDL2-205ENST00000528471 MYH7P12883 1935 aa16.96■□□□□ 0.31
CHRDL2-205ENST00000528471 FAM196BA6NMK8 535 aa16.96■□□□□ 0.3
CHRDL2-205ENST00000528471 PDHXO00330 501 aa16.96■□□□□ 0.3
CHRDL2-205ENST00000528471 CXCL11O14625 94 aa16.96■□□□□ 0.3
CHRDL2-205ENST00000528471 TLR2O60603 784 aa16.96■□□□□ 0.3
CHRDL2-205ENST00000528471 CTNND1O60716 968 aaKnown RBP16.96■□□□□ 0.3
CHRDL2-205ENST00000528471 SLURP2P0DP57 97 aa16.96■□□□□ 0.3
CHRDL2-205ENST00000528471 PTPRAP18433 802 aa16.96■□□□□ 0.3
CHRDL2-205ENST00000528471 MAP3K10Q02779 954 aa16.96■□□□□ 0.3
CHRDL2-205ENST00000528471 KIF22Q14807 665 aa16.96■□□□□ 0.3
CHRDL2-205ENST00000528471 CLASRPQ8N2M8 674 aaKnown RBP16.96■□□□□ 0.3
CHRDL2-205ENST00000528471 KIF1BPQ96EK5 621 aa16.96■□□□□ 0.3
CHRDL2-205ENST00000528471 RBBP6Q7Z6E9 1792 aaKnown RBP16.95■□□□□ 0.3
CHRDL2-205ENST00000528471 NAV1Q8NEY1 1877 aa16.95■□□□□ 0.3
CHRDL2-205ENST00000528471 TBC1D12O60347 775 aa16.95■□□□□ 0.3
CHRDL2-205ENST00000528471 CYP7A1P22680 504 aa16.95■□□□□ 0.3
CHRDL2-205ENST00000528471 PDE3AQ14432 1141 aa16.95■□□□□ 0.3
CHRDL2-205ENST00000528471 ADGRA1Q86SQ6 560 aa16.95■□□□□ 0.3
CHRDL2-205ENST00000528471 PTPN22Q9Y2R2 807 aa16.95■□□□□ 0.3
CHRDL2-205ENST00000528471 KIAA0100Q14667 2235 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms