RNA–Protein interactions for RNA: ENST00000528039.5

RBM4-210, Transcript of RNA binding motif protein 4, human

TSL 3

Gene RBM4, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM4-210	ENST00000528039	SIL1	Q9H173	461 aa		13.69	□□□□□ -0.22
RBM4-210	ENST00000528039	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.69	□□□□□ -0.22
RBM4-210	ENST00000528039	AFG3L2	Q9Y4W6	797 aa		13.69	□□□□□ -0.22
RBM4-210	ENST00000528039	SGPL1	O95470	568 aa		13.68	□□□□□ -0.22
RBM4-210	ENST00000528039	CENPB	P07199	599 aa	Predicted RBP	13.68	□□□□□ -0.22
RBM4-210	ENST00000528039	PHKA1	P46020	1223 aa		13.68	□□□□□ -0.22
RBM4-210	ENST00000528039	FLT3LG	P49771	235 aa		13.68	□□□□□ -0.22
RBM4-210	ENST00000528039	RGS3	P49796	1198 aa		13.68	□□□□□ -0.22
RBM4-210	ENST00000528039	ATP2B3	Q16720	1220 aa		13.68	□□□□□ -0.22
RBM4-210	ENST00000528039	GADL1	Q6ZQY3	521 aa		13.68	□□□□□ -0.22
RBM4-210	ENST00000528039	IDI2	Q9BXS1	227 aa		13.68	□□□□□ -0.22
RBM4-210	ENST00000528039	RFX7	Q2KHR2	1363 aa		13.68	□□□□□ -0.22
RBM4-210	ENST00000528039	MYH13	Q9UKX3	1938 aa		13.68	□□□□□ -0.22
RBM4-210	ENST00000528039	SALL1	Q9NSC2	1324 aa		13.67	□□□□□ -0.22
RBM4-210	ENST00000528039	DDTL	A6NHG4	134 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM4-210	ENST00000528039	ANP32C	O43423	234 aa		13.67	□□□□□ -0.22
RBM4-210	ENST00000528039	INHA	P05111	366 aa		13.67	□□□□□ -0.22
RBM4-210	ENST00000528039	FASTKD5	Q7L8L6	764 aa	Known RBP	13.67	□□□□□ -0.22
RBM4-210	ENST00000528039	CCDC84	Q86UT8	332 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM4-210	ENST00000528039	DDX4	Q9NQI0	724 aa	Known RBP	13.67	□□□□□ -0.22
RBM4-210	ENST00000528039	PICK1	Q9NRD5	415 aa		13.67	□□□□□ -0.22
RBM4-210	ENST00000528039	NR2E3	Q9Y5X4	410 aa		13.67	□□□□□ -0.22
RBM4-210	ENST00000528039	MGAM	O43451	1857 aa		13.66	□□□□□ -0.22
RBM4-210	ENST00000528039	SOX1	O00570	391 aa	Predicted RBP	13.66	□□□□□ -0.22
RBM4-210	ENST00000528039	ENTPD3	O75355	529 aa		13.66	□□□□□ -0.22
RBM4-210	ENST00000528039	ADORA1	P30542	326 aa		13.66	□□□□□ -0.22
RBM4-210	ENST00000528039	MAP3K10	Q02779	954 aa		13.66	□□□□□ -0.22
RBM4-210	ENST00000528039	DEFB118	Q96PH6	123 aa		13.66	□□□□□ -0.22
RBM4-210	ENST00000528039	GNL3L	Q9NVN8	582 aa	Known RBP	13.66	□□□□□ -0.22
RBM4-210	ENST00000528039	SLC45A1	Q9Y2W3	748 aa		13.66	□□□□□ -0.22
RBM4-210	ENST00000528039	GAK	O14976	1311 aa		13.65	□□□□□ -0.22
RBM4-210	ENST00000528039	DOCK2	Q92608	1830 aa		13.65	□□□□□ -0.22
RBM4-210	ENST00000528039	AK9	Q5TCS8	1911 aa		13.65	□□□□□ -0.22
RBM4-210	ENST00000528039	TRIM75P	A6NK02	468 aa		13.65	□□□□□ -0.22
RBM4-210	ENST00000528039	TNPO2	O14787	897 aa	Known RBP	13.65	□□□□□ -0.22
RBM4-210	ENST00000528039	SEMA3E	O15041	775 aa		13.65	□□□□□ -0.22
RBM4-210	ENST00000528039	EVI5	O60447	810 aa		13.65	□□□□□ -0.22
RBM4-210	ENST00000528039	CIAO1	O76071	339 aa		13.65	□□□□□ -0.22
RBM4-210	ENST00000528039	TFRC	P02786	760 aa	Known RBP	13.65	□□□□□ -0.22
RBM4-210	ENST00000528039	PICALM	Q13492	652 aa		13.65	□□□□□ -0.22
RBM4-210	ENST00000528039	IRF5	Q13568	498 aa		13.65	□□□□□ -0.22
RBM4-210	ENST00000528039	TREML2	Q5T2D2	321 aa		13.65	□□□□□ -0.22
RBM4-210	ENST00000528039	CCDC102B	Q68D86	513 aa		13.65	□□□□□ -0.22
RBM4-210	ENST00000528039	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.65	□□□□□ -0.22
RBM4-210	ENST00000528039	PXYLP1	Q8TE99	480 aa		13.65	□□□□□ -0.22
RBM4-210	ENST00000528039	PAK6	Q9NQU5	681 aa	Predicted RBP	13.65	□□□□□ -0.22
RBM4-210	ENST00000528039	CEP126	Q9P2H0	1117 aa		13.65	□□□□□ -0.22
RBM4-210	ENST00000528039	DENND2A	Q9ULE3	1009 aa		13.65	□□□□□ -0.22
RBM4-210	ENST00000528039	LRRFIP2	Q9Y608	721 aa	Known RBP	13.65	□□□□□ -0.22
RBM4-210	ENST00000528039	CTNND1	O60716	968 aa	Known RBP	13.64	□□□□□ -0.23
RBM4-210	ENST00000528039	RASGRF1	Q13972	1273 aa		13.64	□□□□□ -0.23
RBM4-210	ENST00000528039	ANKRD13C	Q8N6S4	541 aa		13.64	□□□□□ -0.23
RBM4-210	ENST00000528039	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.64	□□□□□ -0.23
RBM4-210	ENST00000528039	LRCH3	Q96II8	777 aa		13.64	□□□□□ -0.23
RBM4-210	ENST00000528039	STAP2	Q9UGK3	403 aa		13.64	□□□□□ -0.23
RBM4-210	ENST00000528039	TAOK2	Q9UL54	1235 aa		13.64	□□□□□ -0.23
RBM4-210	ENST00000528039	AGTPBP1	Q9UPW5	1226 aa		13.64	□□□□□ -0.23
RBM4-210	ENST00000528039	PA2G4	Q9UQ80	394 aa	Known RBP	13.64	□□□□□ -0.23
RBM4-210	ENST00000528039	UNC80	Q8N2C7	3258 aa		13.64	□□□□□ -0.23
RBM4-210	ENST00000528039	LAMA2	P24043	3122 aa	Known RBP	13.64	□□□□□ -0.23
RBM4-210	ENST00000528039	PHIP	Q8WWQ0	1821 aa		13.63	□□□□□ -0.23
RBM4-210	ENST00000528039	FAM196B	A6NMK8	535 aa		13.63	□□□□□ -0.23
RBM4-210	ENST00000528039	BTD	P43251	543 aa		13.63	□□□□□ -0.23
RBM4-210	ENST00000528039	DIS3L	Q8TF46	1054 aa	Known RBP	13.63	□□□□□ -0.23
RBM4-210	ENST00000528039	ZNF384	Q8TF68	577 aa		13.63	□□□□□ -0.23
RBM4-210	ENST00000528039	PAWR	Q96IZ0	340 aa	Known RBP	13.63	□□□□□ -0.23
RBM4-210	ENST00000528039	CRISPLD2	Q9H0B8	497 aa		13.63	□□□□□ -0.23
RBM4-210	ENST00000528039	ABCF2	Q9UG63	623 aa		13.63	□□□□□ -0.23
RBM4-210	ENST00000528039	FBXO3	Q9UK99	471 aa		13.63	□□□□□ -0.23
RBM4-210	ENST00000528039		A0A1W2PPC1	479 aa		13.62	□□□□□ -0.23
RBM4-210	ENST00000528039	ZBTB22	O15209	634 aa		13.62	□□□□□ -0.23
RBM4-210	ENST00000528039	UBTFL1	P0CB47	393 aa	Predicted RBP	13.62	□□□□□ -0.23
RBM4-210	ENST00000528039	IL15	P40933	162 aa	Predicted RBP	13.62	□□□□□ -0.23
RBM4-210	ENST00000528039	TIMM10	P62072	90 aa		13.62	□□□□□ -0.23
RBM4-210	ENST00000528039	DZIP1	Q86YF9	867 aa	Known RBP	13.62	□□□□□ -0.23
RBM4-210	ENST00000528039	SLC17A8	Q8NDX2	589 aa		13.62	□□□□□ -0.23
RBM4-210	ENST00000528039	FAM163A	Q96GL9	167 aa	Predicted RBP	13.62	□□□□□ -0.23
RBM4-210	ENST00000528039	PTPRF	P10586	1907 aa		13.62	□□□□□ -0.23
RBM4-210	ENST00000528039	DOCK1	Q14185	1865 aa		13.61	□□□□□ -0.23
RBM4-210	ENST00000528039	MYH2	Q9UKX2	1941 aa		13.61	□□□□□ -0.23
RBM4-210	ENST00000528039	DLL1	O00548	723 aa		13.61	□□□□□ -0.23
RBM4-210	ENST00000528039	RHBDL3	P58872	404 aa		13.61	□□□□□ -0.23
RBM4-210	ENST00000528039	TRIM32	Q13049	653 aa		13.61	□□□□□ -0.23
RBM4-210	ENST00000528039	FAM110C	Q1W6H9	321 aa		13.61	□□□□□ -0.23
RBM4-210	ENST00000528039	ZGPAT	Q8N5A5	531 aa	Known RBP	13.61	□□□□□ -0.23
RBM4-210	ENST00000528039	COA7	Q96BR5	231 aa		13.61	□□□□□ -0.23
RBM4-210	ENST00000528039	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
RBM4-210	ENST00000528039	CUL9	Q8IWT3	2517 aa		13.61	□□□□□ -0.23
RBM4-210	ENST00000528039	DNAH12	Q6ZR08	3092 aa		13.61	□□□□□ -0.23
RBM4-210	ENST00000528039	MROH7-TTC4	A0A0A0MT08	1334 aa		13.61	□□□□□ -0.23
RBM4-210	ENST00000528039	GPR75-ASB3	A0A0A6YYF3	556 aa		13.6	□□□□□ -0.23
RBM4-210	ENST00000528039		E9PSI1	815 aa		13.6	□□□□□ -0.23
RBM4-210	ENST00000528039	MECOM	Q03112	1051 aa		13.6	□□□□□ -0.23
RBM4-210	ENST00000528039	RRP1B	Q14684	758 aa	Known RBP	13.6	□□□□□ -0.23
RBM4-210	ENST00000528039	ALDH1L2	Q3SY69	923 aa		13.6	□□□□□ -0.23
RBM4-210	ENST00000528039	COPRS	Q9NQ92	184 aa		13.6	□□□□□ -0.23
RBM4-210	ENST00000528039	SMC4	Q9NTJ3	1288 aa		13.6	□□□□□ -0.23
RBM4-210	ENST00000528039	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.6	□□□□□ -0.23
RBM4-210	ENST00000528039	PDS5A	Q29RF7	1337 aa	Known RBP	13.6	□□□□□ -0.23
RBM4-210	ENST00000528039	ALPK3	Q96L96	1907 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 64 ms