RNA–Protein interactions for RNA: ENST00000527945.2

LINC00958-203, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,121 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-203ENST00000527945 GRM1Q13255 1194 aa11.24□□□□□ -0.61
LINC00958-203ENST00000527945 SLFNL1Q499Z3 407 aa11.24□□□□□ -0.61
LINC00958-203ENST00000527945 CDC42EP5Q6NZY7 148 aa11.24□□□□□ -0.61
LINC00958-203ENST00000527945 NSUN4Q96CB9 384 aaKnown RBP11.24□□□□□ -0.61
LINC00958-203ENST00000527945 SLC10A4Q96EP9 437 aa11.24□□□□□ -0.61
LINC00958-203ENST00000527945 USP40Q9NVE5 1235 aa11.24□□□□□ -0.61
LINC00958-203ENST00000527945 LRP2BPQ9P2M1 347 aa11.24□□□□□ -0.61
LINC00958-203ENST00000527945 MROH7-TTC4A0A0A0MT08 1334 aa11.24□□□□□ -0.61
LINC00958-203ENST00000527945 USP2O75604 605 aaPredicted RBP11.23□□□□□ -0.61
LINC00958-203ENST00000527945 BAG3O95817 575 aa11.23□□□□□ -0.61
LINC00958-203ENST00000527945 SREBF2Q12772 1141 aa11.23□□□□□ -0.61
LINC00958-203ENST00000527945 TTF1Q15361 905 aaPredicted RBP11.23□□□□□ -0.61
LINC00958-203ENST00000527945 SPRYD7Q5W111 196 aa11.23□□□□□ -0.61
LINC00958-203ENST00000527945 MOB2Q70IA6 237 aa11.23□□□□□ -0.61
LINC00958-203ENST00000527945 PI4K2BQ8TCG2 481 aa11.23□□□□□ -0.61
LINC00958-203ENST00000527945 TMEM39BQ9GZU3 492 aa11.23□□□□□ -0.61
LINC00958-203ENST00000527945 FZD1Q9UP38 647 aa11.23□□□□□ -0.61
LINC00958-203ENST00000527945 NAV1Q8NEY1 1877 aa11.23□□□□□ -0.61
LINC00958-203ENST00000527945 AK9Q5TCS8 1911 aa11.23□□□□□ -0.61
LINC00958-203ENST00000527945 MANSC4A6NHS7 340 aaPredicted RBP11.22□□□□□ -0.61
LINC00958-203ENST00000527945 ALDH1A1P00352 501 aa11.22□□□□□ -0.61
LINC00958-203ENST00000527945 IFIT2P09913 472 aaKnown RBP11.22□□□□□ -0.61
LINC00958-203ENST00000527945 ATP5JP18859 108 aa11.22□□□□□ -0.61
LINC00958-203ENST00000527945 RHBDL3P58872 404 aa11.22□□□□□ -0.61
LINC00958-203ENST00000527945 PPP4CP60510 307 aa11.22□□□□□ -0.61
LINC00958-203ENST00000527945 MAP3K9P80192 1104 aa11.22□□□□□ -0.61
LINC00958-203ENST00000527945 NFIAQ12857 509 aa11.22□□□□□ -0.61
LINC00958-203ENST00000527945 NOL10Q9BSC4 688 aaKnown RBP11.22□□□□□ -0.61
LINC00958-203ENST00000527945 BOLA2Q9H3K6 86 aa11.22□□□□□ -0.61
LINC00958-203ENST00000527945 RAI14Q9P0K7 980 aa11.22□□□□□ -0.61
LINC00958-203ENST00000527945 MYH1P12882 1939 aa11.21□□□□□ -0.61
LINC00958-203ENST00000527945 COL2A1P02458 1487 aaPredicted RBP11.21□□□□□ -0.61
LINC00958-203ENST00000527945 TESPA1A2RU30 521 aaPredicted RBP11.21□□□□□ -0.61
LINC00958-203ENST00000527945 TRPA1O75762 1119 aa11.21□□□□□ -0.61
LINC00958-203ENST00000527945 SLURP2P0DP57 97 aa11.21□□□□□ -0.61
LINC00958-203ENST00000527945 BTDP43251 543 aa11.21□□□□□ -0.61
LINC00958-203ENST00000527945 MAP3K10Q02779 954 aa11.21□□□□□ -0.61
LINC00958-203ENST00000527945 NAA16Q6N069 864 aaPredicted RBP11.21□□□□□ -0.61
LINC00958-203ENST00000527945 ZFPM1Q8IX07 1006 aa11.21□□□□□ -0.61
LINC00958-203ENST00000527945 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.21□□□□□ -0.61
LINC00958-203ENST00000527945 HAUS7Q99871 368 aa11.21□□□□□ -0.61
LINC00958-203ENST00000527945 ZNF341Q9BYN7 854 aa11.21□□□□□ -0.61
LINC00958-203ENST00000527945 DDX4Q9NQI0 724 aaKnown RBP11.21□□□□□ -0.61
LINC00958-203ENST00000527945 FAM198AQ9UFP1 575 aa11.21□□□□□ -0.61
LINC00958-203ENST00000527945 TSKSQ9UJT2 592 aa11.21□□□□□ -0.61
LINC00958-203ENST00000527945 ZNF112Q9UJU3 913 aa11.21□□□□□ -0.61
LINC00958-203ENST00000527945 CSADQ9Y600 493 aa11.21□□□□□ -0.61
LINC00958-203ENST00000527945 BAZ2AQ9UIF9 1905 aaKnown RBP11.21□□□□□ -0.62
LINC00958-203ENST00000527945 ATRNL1Q5VV63 1379 aa11.2□□□□□ -0.62
LINC00958-203ENST00000527945 TCRBV5S4A2TA0A5A2 114 aa11.2□□□□□ -0.62
LINC00958-203ENST00000527945 TBC1D12O60347 775 aa11.2□□□□□ -0.62
LINC00958-203ENST00000527945 WDHD1O75717 1129 aaPredicted RBP11.2□□□□□ -0.62
LINC00958-203ENST00000527945 PDE4AP27815 886 aa11.2□□□□□ -0.62
LINC00958-203ENST00000527945 NUCB1Q02818 461 aa11.2□□□□□ -0.62
LINC00958-203ENST00000527945 MAP3K12Q12852 859 aa11.2□□□□□ -0.62
LINC00958-203ENST00000527945 PRKG1Q13976 671 aa11.2□□□□□ -0.62
LINC00958-203ENST00000527945 ANKRD45Q5TZF3 282 aa11.2□□□□□ -0.62
LINC00958-203ENST00000527945 OTUD7BQ6GQQ9 843 aa11.2□□□□□ -0.62
LINC00958-203ENST00000527945 SH3BP5LQ7L8J4 393 aa11.2□□□□□ -0.62
LINC00958-203ENST00000527945 GCC1Q96CN9 775 aa11.2□□□□□ -0.62
LINC00958-203ENST00000527945 DNAJC2Q99543 621 aaKnown RBP11.2□□□□□ -0.62
LINC00958-203ENST00000527945 LNPKQ9C0E8 428 aa11.2□□□□□ -0.62
LINC00958-203ENST00000527945 MCOLN1Q9GZU1 580 aa11.2□□□□□ -0.62
LINC00958-203ENST00000527945 ATAD5Q96QE3 1844 aa11.2□□□□□ -0.62
LINC00958-203ENST00000527945 PHIPQ8WWQ0 1821 aa11.19□□□□□ -0.62
LINC00958-203ENST00000527945 GOLIM4O00461 696 aa11.19□□□□□ -0.62
LINC00958-203ENST00000527945 RGS3P49796 1198 aa11.19□□□□□ -0.62
LINC00958-203ENST00000527945 PKN2Q16513 984 aaKnown RBP11.19□□□□□ -0.62
LINC00958-203ENST00000527945 B4GALNT3Q6L9W6 998 aa11.19□□□□□ -0.62
LINC00958-203ENST00000527945 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.19□□□□□ -0.62
LINC00958-203ENST00000527945 SKAP1Q86WV1 359 aa11.19□□□□□ -0.62
LINC00958-203ENST00000527945 ERO1BQ86YB8 467 aa11.19□□□□□ -0.62
LINC00958-203ENST00000527945 WNK4Q96J92 1243 aa11.19□□□□□ -0.62
LINC00958-203ENST00000527945 DHX36Q9H2U1 1008 aaKnown RBP11.19□□□□□ -0.62
LINC00958-203ENST00000527945 ECHDC1Q9NTX5 307 aa11.19□□□□□ -0.62
LINC00958-203ENST00000527945 TAOK2Q9UL54 1235 aa11.19□□□□□ -0.62
LINC00958-203ENST00000527945 GTF2A2P52657 109 aa11.18□□□□□ -0.62
LINC00958-203ENST00000527945 DYNLL1P63167 89 aaKnown RBP11.18□□□□□ -0.62
LINC00958-203ENST00000527945 TCP10Q12799 353 aa11.18□□□□□ -0.62
LINC00958-203ENST00000527945 VGLL4Q14135 290 aa11.18□□□□□ -0.62
LINC00958-203ENST00000527945 NOL9Q5SY16 702 aaKnown RBP11.18□□□□□ -0.62
LINC00958-203ENST00000527945 SH3RF3Q8TEJ3 882 aaPredicted RBP11.18□□□□□ -0.62
LINC00958-203ENST00000527945 GPATCH3Q96I76 525 aa11.18□□□□□ -0.62
LINC00958-203ENST00000527945 WRNIP1Q96S55 665 aa11.18□□□□□ -0.62
LINC00958-203ENST00000527945 RWDD1Q9H446 243 aaPredicted RBP11.18□□□□□ -0.62
LINC00958-203ENST00000527945 ZCCHC17Q9NP64 241 aaKnown RBP11.18□□□□□ -0.62
LINC00958-203ENST00000527945 PAG1Q9NWQ8 432 aa11.18□□□□□ -0.62
LINC00958-203ENST00000527945 STAP2Q9UGK3 403 aa11.18□□□□□ -0.62
LINC00958-203ENST00000527945 SPDYE5A6NIY4 337 aa11.17□□□□□ -0.62
LINC00958-203ENST00000527945 IDH1O75874 414 aaKnown RBP11.17□□□□□ -0.62
LINC00958-203ENST00000527945 PDE6AP16499 860 aa11.17□□□□□ -0.62
LINC00958-203ENST00000527945 MX1P20591 662 aa11.17□□□□□ -0.62
LINC00958-203ENST00000527945 PDE1AP54750 535 aa11.17□□□□□ -0.62
LINC00958-203ENST00000527945 PPATQ06203 517 aa11.17□□□□□ -0.62
LINC00958-203ENST00000527945 CTU1Q7Z7A3 348 aaKnown RBP11.17□□□□□ -0.62
LINC00958-203ENST00000527945 CHD1LQ86WJ1 897 aa11.17□□□□□ -0.62
LINC00958-203ENST00000527945 IFNL1Q8IU54 200 aa11.17□□□□□ -0.62
LINC00958-203ENST00000527945 TEX11Q8IYF3 940 aa11.17□□□□□ -0.62
LINC00958-203ENST00000527945 MAGEB6Q8N7X4 407 aa11.17□□□□□ -0.62
LINC00958-203ENST00000527945 CLMNQ96JQ2 1002 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms