RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 GJB4Q9NTQ9 266 aa17.81■□□□□ 0.44
USH1C-207ENST00000527720 TACC3Q9Y6A5 838 aa17.81■□□□□ 0.44
USH1C-207ENST00000527720 A0A1B0GVL5 298 aa17.8■□□□□ 0.44
USH1C-207ENST00000527720 ERICH2A1L162 156 aa17.8■□□□□ 0.44
USH1C-207ENST00000527720 TOM1O60784 492 aa17.8■□□□□ 0.44
USH1C-207ENST00000527720 NDUFA8P51970 172 aa17.8■□□□□ 0.44
USH1C-207ENST00000527720 VPS72Q15906 364 aa17.8■□□□□ 0.44
USH1C-207ENST00000527720 KIAA1524Q8TCG1 905 aa17.8■□□□□ 0.44
USH1C-207ENST00000527720 SDF4Q9BRK5 362 aa17.8■□□□□ 0.44
USH1C-207ENST00000527720 KCNF1Q9H3M0 494 aa17.8■□□□□ 0.44
USH1C-207ENST00000527720 DLEC1Q9Y238 1755 aa17.8■□□□□ 0.44
USH1C-207ENST00000527720 CCDC88AQ3V6T2 1871 aa17.8■□□□□ 0.44
USH1C-207ENST00000527720 MYH2Q9UKX2 1941 aa17.8■□□□□ 0.44
USH1C-207ENST00000527720 SEMA3EO15041 775 aa17.79■□□□□ 0.44
USH1C-207ENST00000527720 RANBP6O60518 1105 aaKnown RBP17.79■□□□□ 0.44
USH1C-207ENST00000527720 RXRAP19793 462 aa17.79■□□□□ 0.44
USH1C-207ENST00000527720 WTAPQ15007 396 aa17.79■□□□□ 0.44
USH1C-207ENST00000527720 AXDND1Q5T1B0 1012 aaPredicted RBP17.79■□□□□ 0.44
USH1C-207ENST00000527720 C11orf57Q6ZUT1 292 aaPredicted RBP17.79■□□□□ 0.44
USH1C-207ENST00000527720 CEP57L1Q8IYX8 460 aa17.79■□□□□ 0.44
USH1C-207ENST00000527720 PHKBQ93100 1093 aa17.79■□□□□ 0.44
USH1C-207ENST00000527720 INCENPQ9NQS7 918 aa17.79■□□□□ 0.44
USH1C-207ENST00000527720 NHSQ6T4R5 1651 aa17.79■□□□□ 0.44
USH1C-207ENST00000527720 MAGEB6P1A0A0J9YX57 407 aa17.79■□□□□ 0.44
USH1C-207ENST00000527720 CCDC196A0A1B0GTZ2 297 aa17.79■□□□□ 0.44
USH1C-207ENST00000527720 PPARAQ07869 468 aa17.79■□□□□ 0.44
USH1C-207ENST00000527720 TIGD1Q96MW7 591 aa17.79■□□□□ 0.44
USH1C-207ENST00000527720 MINPP1Q9UNW1 487 aa17.79■□□□□ 0.44
USH1C-207ENST00000527720 BAZ2AQ9UIF9 1905 aaKnown RBP17.79■□□□□ 0.44
USH1C-207ENST00000527720 PDS5AQ29RF7 1337 aaKnown RBP17.79■□□□□ 0.44
USH1C-207ENST00000527720 COL1A1P02452 1464 aaPredicted RBP17.78■□□□□ 0.44
USH1C-207ENST00000527720 GNL2Q13823 731 aaKnown RBP17.78■□□□□ 0.44
USH1C-207ENST00000527720 PPP2R5BQ15173 497 aa17.78■□□□□ 0.44
USH1C-207ENST00000527720 FAM98CQ17RN3 349 aaKnown RBP17.78■□□□□ 0.44
USH1C-207ENST00000527720 MRFAP1L1Q96HT8 127 aa17.78■□□□□ 0.44
USH1C-207ENST00000527720 AIFM3Q96NN9 605 aa17.78■□□□□ 0.44
USH1C-207ENST00000527720 KIAA1468Q9P260 1216 aa17.78■□□□□ 0.44
USH1C-207ENST00000527720 MAST2Q6P0Q8 1798 aa17.78■□□□□ 0.44
USH1C-207ENST00000527720 BECN2A8MW95 431 aa17.78■□□□□ 0.44
USH1C-207ENST00000527720 TRIM22Q8IYM9 498 aa17.78■□□□□ 0.44
USH1C-207ENST00000527720 MIGA1Q8NAN2 632 aa17.78■□□□□ 0.44
USH1C-207ENST00000527720 BPIFA3Q9BQP9 254 aa17.78■□□□□ 0.44
USH1C-207ENST00000527720 RAI14Q9P0K7 980 aa17.78■□□□□ 0.44
USH1C-207ENST00000527720 NARFQ9UHQ1 456 aa17.78■□□□□ 0.44
USH1C-207ENST00000527720 TAF1LQ8IZX4 1826 aa17.77■□□□□ 0.44
USH1C-207ENST00000527720 PCP11498 1178 aaKnown RBP17.77■□□□□ 0.44
USH1C-207ENST00000527720 GYG1P46976 350 aa17.77■□□□□ 0.44
USH1C-207ENST00000527720 RTN1Q16799 776 aa17.77■□□□□ 0.44
USH1C-207ENST00000527720 TMED8Q6PL24 325 aaPredicted RBP17.77■□□□□ 0.44
USH1C-207ENST00000527720 C3orf67Q6ZVT6 689 aa17.77■□□□□ 0.44
USH1C-207ENST00000527720 DRC7Q8IY82 874 aa17.77■□□□□ 0.44
USH1C-207ENST00000527720 CCDC144CPQ8IYA2 1237 aa17.77■□□□□ 0.44
USH1C-207ENST00000527720 SLC26A6Q9BXS9 759 aa17.77■□□□□ 0.44
USH1C-207ENST00000527720 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.77■□□□□ 0.44
USH1C-207ENST00000527720 ABCF2Q9UG63 623 aa17.77■□□□□ 0.44
USH1C-207ENST00000527720 LAMB1P07942 1786 aa17.77■□□□□ 0.44
USH1C-207ENST00000527720 KIAA1551Q9HCM1 1747 aa17.77■□□□□ 0.43
USH1C-207ENST00000527720 DUOX1Q9NRD9 1551 aa17.77■□□□□ 0.43
USH1C-207ENST00000527720 FAM237AA0A1B0GTK4 181 aa17.77■□□□□ 0.43
USH1C-207ENST00000527720 ZBTB22O15209 634 aa17.77■□□□□ 0.43
USH1C-207ENST00000527720 ZNF202O95125 648 aa17.77■□□□□ 0.43
USH1C-207ENST00000527720 GTF2E1P29083 439 aaPredicted RBP17.77■□□□□ 0.43
USH1C-207ENST00000527720 RRP12Q5JTH9 1297 aaKnown RBP17.77■□□□□ 0.43
USH1C-207ENST00000527720 DHX40Q8IX18 779 aaKnown RBP17.77■□□□□ 0.43
USH1C-207ENST00000527720 RIOK1Q9BRS2 568 aaKnown RBP17.77■□□□□ 0.43
USH1C-207ENST00000527720 MYL10Q9BUA6 226 aa17.77■□□□□ 0.43
USH1C-207ENST00000527720 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.77■□□□□ 0.43
USH1C-207ENST00000527720 BRIP1Q9BX63 1249 aa17.77■□□□□ 0.43
USH1C-207ENST00000527720 TOMM22Q9NS69 142 aa17.77■□□□□ 0.43
USH1C-207ENST00000527720 RPS6KA4O75676 772 aa17.76■□□□□ 0.43
USH1C-207ENST00000527720 RBM6P78332 1123 aaKnown RBP17.76■□□□□ 0.43
USH1C-207ENST00000527720 PTPAQ15257 358 aa17.76■□□□□ 0.43
USH1C-207ENST00000527720 ZRSR1Q15695 479 aaKnown RBP17.76■□□□□ 0.43
USH1C-207ENST00000527720 DNTTIP2Q5QJE6 756 aaKnown RBP17.76■□□□□ 0.43
USH1C-207ENST00000527720 TBC1D9BQ66K14 1250 aa17.76■□□□□ 0.43
USH1C-207ENST00000527720 ADGRA1Q86SQ6 560 aa17.76■□□□□ 0.43
USH1C-207ENST00000527720 ESR2Q92731 530 aa17.76■□□□□ 0.43
USH1C-207ENST00000527720 PRIMPOLQ96LW4 560 aa17.76■□□□□ 0.43
USH1C-207ENST00000527720 MAP3K14Q99558 947 aa17.76■□□□□ 0.43
USH1C-207ENST00000527720 BCL2L12Q9HB09 334 aa17.76■□□□□ 0.43
USH1C-207ENST00000527720 PFKFB1P16118 471 aa17.75■□□□□ 0.43
USH1C-207ENST00000527720 PTGS1P23219 599 aa17.75■□□□□ 0.43
USH1C-207ENST00000527720 CCDC186Q7Z3E2 898 aa17.75■□□□□ 0.43
USH1C-207ENST00000527720 FBXO33Q7Z6M2 555 aa17.75■□□□□ 0.43
USH1C-207ENST00000527720 FAM84BQ96KN1 310 aaPredicted RBP17.75■□□□□ 0.43
USH1C-207ENST00000527720 UBAC1Q9BSL1 405 aa17.75■□□□□ 0.43
USH1C-207ENST00000527720 CLIP2Q9UDT6 1046 aa17.75■□□□□ 0.43
USH1C-207ENST00000527720 LY75O60449 1722 aa17.75■□□□□ 0.43
USH1C-207ENST00000527720 DEXIO95424 95 aa17.75■□□□□ 0.43
USH1C-207ENST00000527720 SLC3A2P08195 630 aaKnown RBP17.75■□□□□ 0.43
USH1C-207ENST00000527720 SAFBQ15424 915 aaKnown RBP eCLIP17.75■□□□□ 0.43
USH1C-207ENST00000527720 NLRP3Q96P20 1036 aa17.75■□□□□ 0.43
USH1C-207ENST00000527720 ANKRD2Q9GZV1 360 aa17.75■□□□□ 0.43
USH1C-207ENST00000527720 IQSEC3Q9UPP2 1182 aaPredicted RBP17.75■□□□□ 0.43
USH1C-207ENST00000527720 HPSEQ9Y251 543 aa17.75■□□□□ 0.43
USH1C-207ENST00000527720 THSD7AQ9UPZ6 1657 aa17.75■□□□□ 0.43
USH1C-207ENST00000527720 WDHD1O75717 1129 aaPredicted RBP17.74■□□□□ 0.43
USH1C-207ENST00000527720 MMP1P03956 469 aa17.74■□□□□ 0.43
USH1C-207ENST00000527720 CELF1Q92879 486 aaKnown RBP17.74■□□□□ 0.43
USH1C-207ENST00000527720 SETDB2Q96T68 719 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms