RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 IDEP14735 1019 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 PPP1R7Q15435 360 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 MRPL46Q9H2W6 279 aaKnown RBP8.11□□□□□ -1.11
CTNND1-216ENST00000527467 ZKSCAN5Q9Y2L8 839 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 GOLGA6CA6NDK9 693 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 GNAT3A8MTJ3 354 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 GOLGA6DP0CG33 693 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 CUL4BQ13620 913 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 PPP2R5AQ15172 486 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 LARGE2Q8N3Y3 721 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 TMEM57Q8N5G2 664 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 PAWRQ96IZ0 340 aaKnown RBP8.11□□□□□ -1.11
CTNND1-216ENST00000527467 TRIM47Q96LD4 638 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 CDC5LQ99459 802 aaKnown RBP8.11□□□□□ -1.11
CTNND1-216ENST00000527467 ZNF287Q9HBT7 754 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 GOLGA6AQ9NYA3 693 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 PRDM15P57071 1507 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-216ENST00000527467 PLEKHG3A1L390 1219 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 RHOXF2BP0C7M4 288 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 PCYT1AP49585 367 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 TMED1Q13445 227 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 ANKRD20A3Q5VUR7 823 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 POTEAQ6S8J7 498 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 DCPSQ96C86 337 aaKnown RBP8.11□□□□□ -1.11
CTNND1-216ENST00000527467 RHOXF2Q9BQY4 288 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 TCP11L1Q9NUJ3 509 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 RMND1Q9NWS8 449 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 RBM27Q9P2N5 1060 aaKnown RBP8.11□□□□□ -1.11
CTNND1-216ENST00000527467 PNPLA6Q8IY17 1366 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 KIF13AQ9H1H9 1805 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 ARHGEF9O43307 516 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 ARMC9Q7Z3E5 817 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 NUDCD3Q8IVD9 361 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 SIL1Q9H173 461 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 EFCC1Q9HA90 598 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 RIPOR2Q9Y4F9 1068 aa8.11□□□□□ -1.11
CTNND1-216ENST00000527467 CCDC194A0A1B0GVG4 234 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 BAG4O95429 457 aaKnown RBP8.1□□□□□ -1.11
CTNND1-216ENST00000527467 PRIM1P49642 420 aaKnown RBP8.1□□□□□ -1.11
CTNND1-216ENST00000527467 NLRP5P59047 1200 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 CCDC102BQ68D86 513 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 RUFY4Q6ZNE9 571 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 CCDC186Q7Z3E2 898 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 C2CD5Q86YS7 1000 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 SYCP3Q8IZU3 236 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 CCDC26Q8TAB7 109 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 ATP6V0A2Q9Y487 856 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 DAAM1Q9Y4D1 1078 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 KIAA0232Q92628 1395 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 C1orf167Q5SNV9 1468 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 PPFIA4O75335 1185 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 PPP2R3AQ06190 1150 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 RPGRIP1Q96KN7 1286 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 POLE3Q9NRF9 147 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 MRFAP1Q9Y605 127 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 U3KPZ7 1027 aaPredicted RBP8.1□□□□□ -1.11
CTNND1-216ENST00000527467 GAS8O95995 478 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 EEF2P13639 858 aaKnown RBP8.1□□□□□ -1.11
CTNND1-216ENST00000527467 U2AF2P26368 475 aaKnown RBP eCLIP8.1□□□□□ -1.111e-10■■□□□ 14
CTNND1-216ENST00000527467 CCDC93Q567U6 631 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 PPP1R21Q6ZMI0 780 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 SPATS2Q86XZ4 545 aaKnown RBP8.1□□□□□ -1.11
CTNND1-216ENST00000527467 IWS1Q96ST2 819 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 EHMT1Q9H9B1 1298 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 I3L4J1 428 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 SULT6B1Q6IMI4 303 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 PALMDQ9NP74 551 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 DDX21Q9NR30 783 aaKnown RBP eCLIP8.1□□□□□ -1.114e-6■□□□□ 11.2
CTNND1-216ENST00000527467 CTTNBP2NLQ9P2B4 639 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 NSD2O96028 1365 aa8.1□□□□□ -1.11
CTNND1-216ENST00000527467 GOLGA8AA7E2F4 631 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 GOLGA8BA8MQT2 603 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 ESRRGP62508 458 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 SLC15A2Q16348 729 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 RILPL1Q5EBL4 403 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 CWC27Q6UX04 472 aaKnown RBP8.09□□□□□ -1.11
CTNND1-216ENST00000527467 FAM71BQ8TC56 605 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 CSRNP2Q9H175 543 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 RNF181Q9P0P0 153 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 HHATQ5VTY9 493 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 CHD1LQ86WJ1 897 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 PDZD8Q8NEN9 1154 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 GABPB2Q8TAK5 448 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-216ENST00000527467 CUL5Q93034 780 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 ERO1AQ96HE7 468 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 ZNF408Q9H9D4 720 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 ANLNQ9NQW6 1124 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 NUB1Q9Y5A7 615 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 ATP7BP35670 1465 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 AATKQ6ZMQ8 1374 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 CCT4P50991 539 aaKnown RBP8.09□□□□□ -1.11
CTNND1-216ENST00000527467 UAP1Q16222 522 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-216ENST00000527467 TMEM106CQ9BVX2 250 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 DRC3Q9H069 523 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 AFG3L2Q9Y4W6 797 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 CAPN7Q9Y6W3 813 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.09□□□□□ -1.11
CTNND1-216ENST00000527467 FLT4P35916 1363 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 POTEB3A0JP26 581 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 GJC1P36383 396 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 864.6 ms