RNA–Protein interactions for RNA: ENST00000527421.5

UBXN1-208, Transcript of UBX domain protein 1, humanhuman

TSL 5

Gene UBXN1, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-208ENST00000527421 LRRCC1Q9C099 1032 aa22.76■■□□□ 1.23
UBXN1-208ENST00000527421 DDX4Q9NQI0 724 aaKnown RBP22.76■■□□□ 1.23
UBXN1-208ENST00000527421 NDUFB9Q9Y6M9 179 aa22.76■■□□□ 1.23
UBXN1-208ENST00000527421 BAG3O95817 575 aa22.75■■□□□ 1.23
UBXN1-208ENST00000527421 GJA5P36382 358 aa22.75■■□□□ 1.23
UBXN1-208ENST00000527421 NPM3O75607 178 aaKnown RBP22.74■■□□□ 1.23
UBXN1-208ENST00000527421 PLCG2P16885 1265 aa22.74■■□□□ 1.23
UBXN1-208ENST00000527421 INHBEP58166 350 aa22.74■■□□□ 1.23
UBXN1-208ENST00000527421 TEX11Q8IYF3 940 aa22.74■■□□□ 1.23
UBXN1-208ENST00000527421 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.74■■□□□ 1.23
UBXN1-208ENST00000527421 CRBNQ96SW2 442 aa22.74■■□□□ 1.23
UBXN1-208ENST00000527421 AATFQ9NY61 560 aaKnown RBP eCLIP22.74■■□□□ 1.23
UBXN1-208ENST00000527421 SNCAIPQ9Y6H5 919 aa22.74■■□□□ 1.23
UBXN1-208ENST00000527421 CDK5RAP2Q96SN8 1893 aa22.74■■□□□ 1.23
UBXN1-208ENST00000527421 ATRNL1Q5VV63 1379 aa22.74■■□□□ 1.23
UBXN1-208ENST00000527421 COL2A1P02458 1487 aaPredicted RBP22.73■■□□□ 1.23
UBXN1-208ENST00000527421 FOCADQ5VW36 1801 aa22.73■■□□□ 1.23
UBXN1-208ENST00000527421 MAP3K12Q12852 859 aa22.73■■□□□ 1.23
UBXN1-208ENST00000527421 ADGRA1Q86SQ6 560 aa22.73■■□□□ 1.23
UBXN1-208ENST00000527421 SH3RF3Q8TEJ3 882 aaPredicted RBP22.73■■□□□ 1.23
UBXN1-208ENST00000527421 CNKSR2Q8WXI2 1034 aa22.73■■□□□ 1.23
UBXN1-208ENST00000527421 ZKSCAN4Q969J2 545 aaPredicted RBP22.73■■□□□ 1.23
UBXN1-208ENST00000527421 OTUD5Q96G74 571 aa22.73■■□□□ 1.23
UBXN1-208ENST00000527421 ABHD8Q96I13 439 aa22.73■■□□□ 1.23
UBXN1-208ENST00000527421 ANTXR1Q9H6X2 564 aa22.73■■□□□ 1.23
UBXN1-208ENST00000527421 SPDYE5A6NIY4 337 aa22.72■■□□□ 1.23
UBXN1-208ENST00000527421 ALDH1A1P00352 501 aa22.72■■□□□ 1.23
UBXN1-208ENST00000527421 CYP7A1P22680 504 aa22.72■■□□□ 1.23
UBXN1-208ENST00000527421 TTF1Q15361 905 aaPredicted RBP22.72■■□□□ 1.23
UBXN1-208ENST00000527421 SH3BP5LQ7L8J4 393 aa22.72■■□□□ 1.23
UBXN1-208ENST00000527421 DCTPP1Q9H773 170 aa22.72■■□□□ 1.23
UBXN1-208ENST00000527421 PCDHB15Q9Y5E8 787 aa22.72■■□□□ 1.23
UBXN1-208ENST00000527421 DDTLA6NHG4 134 aaPredicted RBP22.71■■□□□ 1.23
UBXN1-208ENST00000527421 SMARCA5O60264 1052 aaPredicted RBP22.71■■□□□ 1.23
UBXN1-208ENST00000527421 INPP5BP32019 993 aa22.71■■□□□ 1.23
UBXN1-208ENST00000527421 PPP4CP60510 307 aa22.71■■□□□ 1.23
UBXN1-208ENST00000527421 TMED8Q6PL24 325 aaPredicted RBP22.71■■□□□ 1.23
UBXN1-208ENST00000527421 ERO1BQ86YB8 467 aa22.71■■□□□ 1.23
UBXN1-208ENST00000527421 IFNL1Q8IU54 200 aa22.71■■□□□ 1.23
UBXN1-208ENST00000527421 MAGEB6Q8N7X4 407 aa22.71■■□□□ 1.23
UBXN1-208ENST00000527421 DNAJC2Q99543 621 aaKnown RBP22.71■■□□□ 1.23
UBXN1-208ENST00000527421 OSBPL5Q9H0X9 879 aaPredicted RBP22.71■■□□□ 1.23
UBXN1-208ENST00000527421 ZNF112Q9UJU3 913 aa22.71■■□□□ 1.23
UBXN1-208ENST00000527421 IGF2BP3O00425 579 aaKnown RBP eCLIP22.69■■□□□ 1.22
UBXN1-208ENST00000527421 TBC1D8O95759 1140 aa22.69■■□□□ 1.22
UBXN1-208ENST00000527421 GTF2A2P52657 109 aa22.69■■□□□ 1.22
UBXN1-208ENST00000527421 NOL9Q5SY16 702 aaKnown RBP22.69■■□□□ 1.22
UBXN1-208ENST00000527421 OTUD7BQ6GQQ9 843 aa22.69■■□□□ 1.22
UBXN1-208ENST00000527421 DOCK1Q14185 1865 aa22.68■■□□□ 1.22
UBXN1-208ENST00000527421 TESPA1A2RU30 521 aaPredicted RBP22.68■■□□□ 1.22
UBXN1-208ENST00000527421 GOLIM4O00461 696 aa22.68■■□□□ 1.22
UBXN1-208ENST00000527421 ATP5JP18859 108 aa22.68■■□□□ 1.22
UBXN1-208ENST00000527421 PPIL2Q13356 520 aa22.68■■□□□ 1.22
UBXN1-208ENST00000527421 CERS3Q8IU89 383 aa22.68■■□□□ 1.22
UBXN1-208ENST00000527421 MS4A4AQ96JQ5 239 aa22.68■■□□□ 1.22
UBXN1-208ENST00000527421 CFHR5Q9BXR6 569 aa22.68■■□□□ 1.22
UBXN1-208ENST00000527421 PPATQ06203 517 aa22.67■■□□□ 1.22
UBXN1-208ENST00000527421 MIGA1Q8NAN2 632 aa22.67■■□□□ 1.22
UBXN1-208ENST00000527421 BOLA2Q9H3K6 86 aa22.67■■□□□ 1.22
UBXN1-208ENST00000527421 FLT1P17948 1338 aa22.66■■□□□ 1.22
UBXN1-208ENST00000527421 CCL15-CCL14A0A0B4J2E2 113 aa22.66■■□□□ 1.22
UBXN1-208ENST00000527421 DYNLL1P63167 89 aaKnown RBP22.66■■□□□ 1.22
UBXN1-208ENST00000527421 MAP3K10Q02779 954 aa22.66■■□□□ 1.22
UBXN1-208ENST00000527421 CCL15Q16663 113 aa22.66■■□□□ 1.22
UBXN1-208ENST00000527421 MAPKAPK5Q8IW41 473 aa22.66■■□□□ 1.22
UBXN1-208ENST00000527421 TGFBRAP1Q8WUH2 860 aa22.66■■□□□ 1.22
UBXN1-208ENST00000527421 PAG1Q9NWQ8 432 aa22.66■■□□□ 1.22
UBXN1-208ENST00000527421 MYH7P12883 1935 aa22.66■■□□□ 1.22
UBXN1-208ENST00000527421 PHF20L1A8MW92 1017 aa22.65■■□□□ 1.22
UBXN1-208ENST00000527421 IRF6O14896 467 aa22.65■■□□□ 1.22
UBXN1-208ENST00000527421 PDE6AP16499 860 aa22.65■■□□□ 1.22
UBXN1-208ENST00000527421 SNAPC2Q13487 334 aa22.65■■□□□ 1.22
UBXN1-208ENST00000527421 NOM1Q5C9Z4 860 aaKnown RBP22.65■■□□□ 1.22
UBXN1-208ENST00000527421 SLC9C2Q5TAH2 1124 aa22.65■■□□□ 1.22
UBXN1-208ENST00000527421 SCYL3Q8IZE3 742 aa22.65■■□□□ 1.22
UBXN1-208ENST00000527421 BRI3BPQ8WY22 251 aa22.65■■□□□ 1.22
UBXN1-208ENST00000527421 GPATCH3Q96I76 525 aa22.65■■□□□ 1.22
UBXN1-208ENST00000527421 HAUS7Q99871 368 aa22.65■■□□□ 1.22
UBXN1-208ENST00000527421 PTPN18Q99952 460 aa22.65■■□□□ 1.22
UBXN1-208ENST00000527421 DHX36Q9H2U1 1008 aaKnown RBP22.65■■□□□ 1.22
UBXN1-208ENST00000527421 PICK1Q9NRD5 415 aa22.65■■□□□ 1.22
UBXN1-208ENST00000527421 SIPA1L1O43166 1804 aa22.65■■□□□ 1.22
UBXN1-208ENST00000527421 TBC1D12O60347 775 aa22.64■■□□□ 1.21
UBXN1-208ENST00000527421 CETPP11597 493 aa22.64■■□□□ 1.21
UBXN1-208ENST00000527421 EDC3Q96F86 508 aaKnown RBP22.64■■□□□ 1.21
UBXN1-208ENST00000527421 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.64■■□□□ 1.21
UBXN1-208ENST00000527421 ECHDC1Q9NTX5 307 aa22.64■■□□□ 1.21
UBXN1-208ENST00000527421 MYH1P12882 1939 aa22.64■■□□□ 1.21
UBXN1-208ENST00000527421 GPR25O00155 361 aa22.63■■□□□ 1.21
UBXN1-208ENST00000527421 SLURP2P0DP57 97 aa22.63■■□□□ 1.21
UBXN1-208ENST00000527421 AAMPQ13685 434 aa22.63■■□□□ 1.21
UBXN1-208ENST00000527421 ATAD5Q96QE3 1844 aa22.63■■□□□ 1.21
UBXN1-208ENST00000527421 FAM196BA6NMK8 535 aa22.62■■□□□ 1.21
UBXN1-208ENST00000527421 CTNND1O60716 968 aaKnown RBP22.62■■□□□ 1.21
UBXN1-208ENST00000527421 ZNF296Q8WUU4 475 aaPredicted RBP22.62■■□□□ 1.21
UBXN1-208ENST00000527421 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.62■■□□□ 1.21
UBXN1-208ENST00000527421 R3HDMLQ9H3Y0 253 aa22.62■■□□□ 1.21
UBXN1-208ENST00000527421 PI4KBQ9UBF8 816 aa22.62■■□□□ 1.21
UBXN1-208ENST00000527421 HERC5Q9UII4 1024 aaKnown RBP22.62■■□□□ 1.21
UBXN1-208ENST00000527421 NAV1Q8NEY1 1877 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms