RNA–Protein interactions for RNA: ENST00000527373.1

UBQLN1-204, Transcript of ubiquilin 1, humanhuman

TSL 2

Gene UBQLN1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-204ENST00000527373 CERS3Q8IU89 383 aa12.6□□□□□ -0.39
UBQLN1-204ENST00000527373 MAPKAPK5Q8IW41 473 aa12.6□□□□□ -0.39
UBQLN1-204ENST00000527373 LCORLQ8N3X6 602 aa12.6□□□□□ -0.39
UBQLN1-204ENST00000527373 OSBP2Q969R2 916 aa12.6□□□□□ -0.39
UBQLN1-204ENST00000527373 SEC62Q99442 399 aaKnown RBP12.6□□□□□ -0.39
UBQLN1-204ENST00000527373 GPAA1O43292 621 aa12.59□□□□□ -0.39
UBQLN1-204ENST00000527373 WDHD1O75717 1129 aaPredicted RBP12.59□□□□□ -0.39
UBQLN1-204ENST00000527373 APPP05067 770 aa12.59□□□□□ -0.39
UBQLN1-204ENST00000527373 FMR1Q06787 632 aaKnown RBP eCLIP12.59□□□□□ -0.39
UBQLN1-204ENST00000527373 FSTL1Q12841 308 aa12.59□□□□□ -0.39
UBQLN1-204ENST00000527373 BMP2KLQ5H9B9 411 aa12.59□□□□□ -0.39
UBQLN1-204ENST00000527373 FKBP1CQ5VVH2 108 aa12.59□□□□□ -0.39
UBQLN1-204ENST00000527373 FAM227BQ96M60 508 aa12.59□□□□□ -0.39
UBQLN1-204ENST00000527373 RIOK1Q9BRS2 568 aaKnown RBP12.59□□□□□ -0.39
UBQLN1-204ENST00000527373 TMEM39BQ9GZU3 492 aa12.59□□□□□ -0.39
UBQLN1-204ENST00000527373 FAM198AQ9UFP1 575 aa12.59□□□□□ -0.39
UBQLN1-204ENST00000527373 SAP30BPQ9UHR5 308 aaKnown RBP12.59□□□□□ -0.39
UBQLN1-204ENST00000527373 SLC4A4Q9Y6R1 1079 aa12.59□□□□□ -0.39
UBQLN1-204ENST00000527373 ECM29Q5VYK3 1845 aa12.58□□□□□ -0.4
UBQLN1-204ENST00000527373 A0A0D9SFI3 127 aa12.58□□□□□ -0.4
UBQLN1-204ENST00000527373 PRKAB2O43741 272 aa12.58□□□□□ -0.4
UBQLN1-204ENST00000527373 NF2P35240 595 aa12.58□□□□□ -0.4
UBQLN1-204ENST00000527373 PRKG1Q13976 671 aa12.58□□□□□ -0.4
UBQLN1-204ENST00000527373 TTLL12Q14166 644 aaPredicted RBP12.58□□□□□ -0.4
UBQLN1-204ENST00000527373 SLC4A8Q2Y0W8 1093 aa12.58□□□□□ -0.4
UBQLN1-204ENST00000527373 MCMDC2Q4G0Z9 681 aa12.58□□□□□ -0.4
UBQLN1-204ENST00000527373 CCDC129Q6ZRS4 1044 aa12.58□□□□□ -0.4
UBQLN1-204ENST00000527373 FAM83AQ86UY5 434 aa12.58□□□□□ -0.4
UBQLN1-204ENST00000527373 ZFPM1Q8IX07 1006 aa12.58□□□□□ -0.4
UBQLN1-204ENST00000527373 SDR42E1Q8WUS8 393 aa12.58□□□□□ -0.4
UBQLN1-204ENST00000527373 FAM151AQ8WW52 585 aa12.58□□□□□ -0.4
UBQLN1-204ENST00000527373 CDCA5Q96FF9 252 aa12.58□□□□□ -0.4
UBQLN1-204ENST00000527373 DDRGK1Q96HY6 314 aa12.58□□□□□ -0.4
UBQLN1-204ENST00000527373 IDI2Q9BXS1 227 aa12.58□□□□□ -0.4
UBQLN1-204ENST00000527373 DDX4Q9NQI0 724 aaKnown RBP12.58□□□□□ -0.4
UBQLN1-204ENST00000527373 HELLSQ9NRZ9 838 aa12.58□□□□□ -0.4
UBQLN1-204ENST00000527373 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.58□□□□□ -0.4
UBQLN1-204ENST00000527373 ENTPD3O75355 529 aa12.57□□□□□ -0.4
UBQLN1-204ENST00000527373 CELF2O95319 508 aaKnown RBP12.57□□□□□ -0.4
UBQLN1-204ENST00000527373 ITGBL1O95965 494 aaPredicted RBP12.57□□□□□ -0.4
UBQLN1-204ENST00000527373 SUPT20HL1Q3ZLR7 823 aa12.57□□□□□ -0.4
UBQLN1-204ENST00000527373 NBPF12Q5TAG4 269 aaPredicted RBP12.57□□□□□ -0.4
UBQLN1-204ENST00000527373 TICAM2Q86XR7 235 aa12.57□□□□□ -0.4
UBQLN1-204ENST00000527373 RUFY2Q8WXA3 655 aa12.57□□□□□ -0.4
UBQLN1-204ENST00000527373 STRBPQ96SI9 672 aaKnown RBP12.57□□□□□ -0.4
UBQLN1-204ENST00000527373 OSBPL5Q9H0X9 879 aaPredicted RBP12.57□□□□□ -0.4
UBQLN1-204ENST00000527373 PPP2R3BQ9Y5P8 575 aa12.57□□□□□ -0.4
UBQLN1-204ENST00000527373 CNTNAP1P78357 1384 aa12.56□□□□□ -0.4
UBQLN1-204ENST00000527373 RFX7Q2KHR2 1363 aa12.56□□□□□ -0.4
UBQLN1-204ENST00000527373 HAX1O00165 279 aa12.56□□□□□ -0.4
UBQLN1-204ENST00000527373 POLR3DP05423 398 aaPredicted RBP12.56□□□□□ -0.4
UBQLN1-204ENST00000527373 GNAT2P19087 354 aa12.56□□□□□ -0.4
UBQLN1-204ENST00000527373 CHMLP26374 656 aa12.56□□□□□ -0.4
UBQLN1-204ENST00000527373 MFAP1P55081 439 aaKnown RBP12.56□□□□□ -0.4
UBQLN1-204ENST00000527373 CASC1Q6TDU7 716 aa12.56□□□□□ -0.4
UBQLN1-204ENST00000527373 CDAN1Q8IWY9 1227 aa12.56□□□□□ -0.4
UBQLN1-204ENST00000527373 MCM9Q9NXL9 1143 aa12.56□□□□□ -0.4
UBQLN1-204ENST00000527373 FLT1P17948 1338 aa12.56□□□□□ -0.4
UBQLN1-204ENST00000527373 HLA-DOAP06340 250 aa12.55□□□□□ -0.4
UBQLN1-204ENST00000527373 MIGA2Q7L4E1 593 aa12.55□□□□□ -0.4
UBQLN1-204ENST00000527373 AMOTL1Q8IY63 956 aa12.55□□□□□ -0.4
UBQLN1-204ENST00000527373 C2orf69Q8N8R5 385 aa12.55□□□□□ -0.4
UBQLN1-204ENST00000527373 CSRNP1Q96S65 589 aa12.55□□□□□ -0.4
UBQLN1-204ENST00000527373 TRIM34Q9BYJ4 488 aa12.55□□□□□ -0.4
UBQLN1-204ENST00000527373 NACAP1Q9BZK3 213 aa12.55□□□□□ -0.4
UBQLN1-204ENST00000527373 PALD1Q9ULE6 856 aa12.55□□□□□ -0.4
UBQLN1-204ENST00000527373 DDTLA6NHG4 134 aaPredicted RBP12.54□□□□□ -0.4
UBQLN1-204ENST00000527373 PATL2C9JE40 543 aaKnown RBP12.54□□□□□ -0.4
UBQLN1-204ENST00000527373 PPP1R12BO60237 982 aaPredicted RBP12.54□□□□□ -0.4
UBQLN1-204ENST00000527373 CDC45O75419 566 aa12.54□□□□□ -0.4
UBQLN1-204ENST00000527373 TDO2P48775 406 aa12.54□□□□□ -0.4
UBQLN1-204ENST00000527373 SH3BP5LQ7L8J4 393 aa12.54□□□□□ -0.4
UBQLN1-204ENST00000527373 ZNF589Q86UQ0 364 aaPredicted RBP12.54□□□□□ -0.4
UBQLN1-204ENST00000527373 CRACR2BQ8N4Y2 399 aaPredicted RBP12.54□□□□□ -0.4
UBQLN1-204ENST00000527373 HOOK2Q96ED9 719 aa12.54□□□□□ -0.4
UBQLN1-204ENST00000527373 TEPSINQ96N21 525 aa12.54□□□□□ -0.4
UBQLN1-204ENST00000527373 DCP1AQ9NPI6 582 aaPredicted RBP12.54□□□□□ -0.4
UBQLN1-204ENST00000527373 ATP8A2Q9NTI2 1148 aa12.54□□□□□ -0.4
UBQLN1-204ENST00000527373 FZD1Q9UP38 647 aa12.54□□□□□ -0.4
UBQLN1-204ENST00000527373 SSUH2Q9Y2M2 353 aa12.54□□□□□ -0.4
UBQLN1-204ENST00000527373 CCDC171Q6TFL3 1326 aa12.54□□□□□ -0.4
UBQLN1-204ENST00000527373 GSG1L2A8MUP6 293 aa12.53□□□□□ -0.4
UBQLN1-204ENST00000527373 MINDY4BA8MYZ0 360 aa12.53□□□□□ -0.4
UBQLN1-204ENST00000527373 USP17L12C9JPN9 530 aa12.53□□□□□ -0.4
UBQLN1-204ENST00000527373 USP17L21D6R901 530 aa12.53□□□□□ -0.4
UBQLN1-204ENST00000527373 C1QTNF8P60827 252 aa12.53□□□□□ -0.4
UBQLN1-204ENST00000527373 VPS53Q5VIR6 699 aa12.53□□□□□ -0.4
UBQLN1-204ENST00000527373 DCAF15Q66K64 600 aa12.53□□□□□ -0.4
UBQLN1-204ENST00000527373 KIAA1211Q6ZU35 1233 aa12.53□□□□□ -0.4
UBQLN1-204ENST00000527373 ARMC9Q7Z3E5 817 aa12.53□□□□□ -0.4
UBQLN1-204ENST00000527373 TTC6Q86TZ1 520 aa12.53□□□□□ -0.4
UBQLN1-204ENST00000527373 STK11IPQ8N1F8 1099 aa12.53□□□□□ -0.4
UBQLN1-204ENST00000527373 NAPBQ9H115 298 aa12.53□□□□□ -0.4
UBQLN1-204ENST00000527373 DHX36Q9H2U1 1008 aaKnown RBP12.53□□□□□ -0.4
UBQLN1-204ENST00000527373 GBA2Q9HCG7 927 aaPredicted RBP12.53□□□□□ -0.4
UBQLN1-204ENST00000527373 PI4KBQ9UBF8 816 aa12.53□□□□□ -0.4
UBQLN1-204ENST00000527373 ABT1Q9ULW3 272 aaKnown RBP12.53□□□□□ -0.4
UBQLN1-204ENST00000527373 ANGEL1Q9UNK9 670 aaKnown RBP12.53□□□□□ -0.4
UBQLN1-204ENST00000527373 PASKQ96RG2 1323 aa12.53□□□□□ -0.4
UBQLN1-204ENST00000527373 TMEM88BA6NKF7 163 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms