RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 BAG3O95817 575 aa12.99□□□□□ -0.33
NEDD8-205ENST00000527046 MAP3K10Q02779 954 aa12.99□□□□□ -0.33
NEDD8-205ENST00000527046 TCP10Q12799 353 aa12.99□□□□□ -0.33
NEDD8-205ENST00000527046 VPS53Q5VIR6 699 aa12.99□□□□□ -0.33
NEDD8-205ENST00000527046 TEX11Q8IYF3 940 aa12.99□□□□□ -0.33
NEDD8-205ENST00000527046 SMC1BQ8NDV3 1235 aa12.99□□□□□ -0.33
NEDD8-205ENST00000527046 CDCA5Q96FF9 252 aa12.99□□□□□ -0.33
NEDD8-205ENST00000527046 DCP1AQ9NPI6 582 aaPredicted RBP12.99□□□□□ -0.33
NEDD8-205ENST00000527046 HELLSQ9NRZ9 838 aa12.99□□□□□ -0.33
NEDD8-205ENST00000527046 ATRNL1Q5VV63 1379 aa12.98□□□□□ -0.33
NEDD8-205ENST00000527046 MYO1BO43795 1136 aa12.98□□□□□ -0.33
NEDD8-205ENST00000527046 PLCG2P16885 1265 aa12.98□□□□□ -0.33
NEDD8-205ENST00000527046 FSTL1Q12841 308 aa12.98□□□□□ -0.33
NEDD8-205ENST00000527046 CWC27Q6UX04 472 aaKnown RBP12.98□□□□□ -0.33
NEDD8-205ENST00000527046 APOBEC3FQ8IUX4 373 aaKnown RBP12.98□□□□□ -0.33
NEDD8-205ENST00000527046 MAPKAPK5Q8IW41 473 aa12.98□□□□□ -0.33
NEDD8-205ENST00000527046 SDR42E1Q8WUS8 393 aa12.98□□□□□ -0.33
NEDD8-205ENST00000527046 OSBPL5Q9H0X9 879 aaPredicted RBP12.98□□□□□ -0.33
NEDD8-205ENST00000527046 EPB41L4AQ9HCS5 686 aaPredicted RBP12.98□□□□□ -0.33
NEDD8-205ENST00000527046 FZD1Q9UP38 647 aa12.98□□□□□ -0.33
NEDD8-205ENST00000527046 DDX60LQ5H9U9 1706 aaKnown RBP12.98□□□□□ -0.33
NEDD8-205ENST00000527046 FLT1P17948 1338 aa12.97□□□□□ -0.33
NEDD8-205ENST00000527046 MCMDC2Q4G0Z9 681 aa12.97□□□□□ -0.33
NEDD8-205ENST00000527046 SULF1Q8IWU6 871 aa12.97□□□□□ -0.33
NEDD8-205ENST00000527046 PALD1Q9ULE6 856 aa12.97□□□□□ -0.33
NEDD8-205ENST00000527046 MYH1P12882 1939 aa12.96□□□□□ -0.33
NEDD8-205ENST00000527046 BAZ2AQ9UIF9 1905 aaKnown RBP12.96□□□□□ -0.33
NEDD8-205ENST00000527046 TRPM7Q96QT4 1865 aa12.96□□□□□ -0.33
NEDD8-205ENST00000527046 PATL2C9JE40 543 aaKnown RBP12.96□□□□□ -0.33
NEDD8-205ENST00000527046 USP2O75604 605 aaPredicted RBP12.96□□□□□ -0.33
NEDD8-205ENST00000527046 PLCD1P51178 756 aa12.96□□□□□ -0.33
NEDD8-205ENST00000527046 PICALMQ13492 652 aa12.96□□□□□ -0.33
NEDD8-205ENST00000527046 RRP1BQ14684 758 aaKnown RBP12.96□□□□□ -0.33
NEDD8-205ENST00000527046 MOB2Q70IA6 237 aa12.96□□□□□ -0.33
NEDD8-205ENST00000527046 METTL16Q86W50 562 aaKnown RBP12.96□□□□□ -0.33
NEDD8-205ENST00000527046 PPP2R3BQ9Y5P8 575 aa12.96□□□□□ -0.33
NEDD8-205ENST00000527046 TACC3Q9Y6A5 838 aa12.96□□□□□ -0.33
NEDD8-205ENST00000527046 SLC4A4Q9Y6R1 1079 aa12.96□□□□□ -0.33
NEDD8-205ENST00000527046 SGSM2O43147 1006 aa12.95□□□□□ -0.34
NEDD8-205ENST00000527046 CYP2D6P10635 497 aa12.95□□□□□ -0.34
NEDD8-205ENST00000527046 HSPD1P10809 573 aaKnown RBP12.95□□□□□ -0.34
NEDD8-205ENST00000527046 TNFAIP1Q13829 316 aa12.95□□□□□ -0.34
NEDD8-205ENST00000527046 CTR9Q6PD62 1173 aa12.95□□□□□ -0.34
NEDD8-205ENST00000527046 CERS3Q8IU89 383 aa12.95□□□□□ -0.34
NEDD8-205ENST00000527046 IFNL3Q8IZI9 196 aa12.95□□□□□ -0.34
NEDD8-205ENST00000527046 AIDAQ96BJ3 306 aa12.95□□□□□ -0.34
NEDD8-205ENST00000527046 DNAJC18Q9H819 358 aa12.95□□□□□ -0.34
NEDD8-205ENST00000527046 ATP8A2Q9NTI2 1148 aa12.95□□□□□ -0.34
NEDD8-205ENST00000527046 COL2A1P02458 1487 aaPredicted RBP12.95□□□□□ -0.34
NEDD8-205ENST00000527046 PAPPA2Q9BXP8 1791 aa12.94□□□□□ -0.34
NEDD8-205ENST00000527046 CYP2D7A0A087X1C5 515 aa12.94□□□□□ -0.34
NEDD8-205ENST00000527046 PHF20L1A8MW92 1017 aa12.94□□□□□ -0.34
NEDD8-205ENST00000527046 JAG1P78504 1218 aa12.94□□□□□ -0.34
NEDD8-205ENST00000527046 PTH1RQ03431 593 aa12.94□□□□□ -0.34
NEDD8-205ENST00000527046 GABPAQ06546 454 aa12.94□□□□□ -0.34
NEDD8-205ENST00000527046 ALX1Q15699 326 aa12.94□□□□□ -0.34
NEDD8-205ENST00000527046 LRRFIP1Q32MZ4 808 aaKnown RBP12.94□□□□□ -0.34
NEDD8-205ENST00000527046 C12orf60Q5U649 245 aa12.94□□□□□ -0.34
NEDD8-205ENST00000527046 MIGA2Q7L4E1 593 aa12.94□□□□□ -0.34
NEDD8-205ENST00000527046 NOL10Q9BSC4 688 aaKnown RBP12.94□□□□□ -0.34
NEDD8-205ENST00000527046 CRNKL1Q9BZJ0 848 aaKnown RBP12.94□□□□□ -0.34
NEDD8-205ENST00000527046 TMOD2Q9NZR1 351 aa12.94□□□□□ -0.34
NEDD8-205ENST00000527046 SAP30BPQ9UHR5 308 aaKnown RBP12.94□□□□□ -0.34
NEDD8-205ENST00000527046 CCDC171Q6TFL3 1326 aa12.93□□□□□ -0.34
NEDD8-205ENST00000527046 USP17L12C9JPN9 530 aa12.93□□□□□ -0.34
NEDD8-205ENST00000527046 USP17L21D6R901 530 aa12.93□□□□□ -0.34
NEDD8-205ENST00000527046 HIP1O00291 1037 aa12.93□□□□□ -0.34
NEDD8-205ENST00000527046 TBC1D12O60347 775 aa12.93□□□□□ -0.34
NEDD8-205ENST00000527046 CELF2O95319 508 aaKnown RBP12.93□□□□□ -0.34
NEDD8-205ENST00000527046 FGAP02671 866 aa12.93□□□□□ -0.34
NEDD8-205ENST00000527046 TNNI2P48788 182 aa12.93□□□□□ -0.34
NEDD8-205ENST00000527046 C1QTNF8P60827 252 aa12.93□□□□□ -0.34
NEDD8-205ENST00000527046 MAP3K11Q16584 847 aa12.93□□□□□ -0.34
NEDD8-205ENST00000527046 SBK1Q52WX2 424 aa12.93□□□□□ -0.34
NEDD8-205ENST00000527046 LDLRAD1Q5T700 205 aa12.93□□□□□ -0.34
NEDD8-205ENST00000527046 GIMAP6Q6P9H5 292 aa12.93□□□□□ -0.34
NEDD8-205ENST00000527046 NKX2-3Q8TAU0 364 aa12.93□□□□□ -0.34
NEDD8-205ENST00000527046 ESYT1Q9BSJ8 1104 aa12.93□□□□□ -0.34
NEDD8-205ENST00000527046 DIAPH3Q9NSV4 1193 aa12.93□□□□□ -0.34
NEDD8-205ENST00000527046 ZNF112Q9UJU3 913 aa12.93□□□□□ -0.34
NEDD8-205ENST00000527046 FAM196BA6NMK8 535 aa12.92□□□□□ -0.34
NEDD8-205ENST00000527046 GNAT2P19087 354 aa12.92□□□□□ -0.34
NEDD8-205ENST00000527046 USP5P45974 858 aa12.92□□□□□ -0.34
NEDD8-205ENST00000527046 NAV1Q8NEY1 1877 aa12.92□□□□□ -0.34
NEDD8-205ENST00000527046 KLRG1Q96E93 195 aa12.92□□□□□ -0.34
NEDD8-205ENST00000527046 NBPF3Q9H094 633 aa12.92□□□□□ -0.34
NEDD8-205ENST00000527046 MCM9Q9NXL9 1143 aa12.92□□□□□ -0.34
NEDD8-205ENST00000527046 UBE2Q2LH0YL09 131 aa12.91□□□□□ -0.34
NEDD8-205ENST00000527046 CDC45O75419 566 aa12.91□□□□□ -0.34
NEDD8-205ENST00000527046 PRKG1Q13976 671 aa12.91□□□□□ -0.34
NEDD8-205ENST00000527046 SLC4A8Q2Y0W8 1093 aa12.91□□□□□ -0.34
NEDD8-205ENST00000527046 SUPT20HL1Q3ZLR7 823 aa12.91□□□□□ -0.34
NEDD8-205ENST00000527046 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.91□□□□□ -0.34
NEDD8-205ENST00000527046 FOXP4Q8IVH2 680 aaPredicted RBP12.91□□□□□ -0.34
NEDD8-205ENST00000527046 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.91□□□□□ -0.343e-15■■□□□ 12.8
NEDD8-205ENST00000527046 MAP4K1Q92918 833 aa12.91□□□□□ -0.34
NEDD8-205ENST00000527046 DYNLL2Q96FJ2 89 aa12.91□□□□□ -0.34
NEDD8-205ENST00000527046 CSRNP1Q96S65 589 aa12.91□□□□□ -0.34
NEDD8-205ENST00000527046 LSG1Q9H089 658 aaKnown RBP12.91□□□□□ -0.34
NEDD8-205ENST00000527046 DHX36Q9H2U1 1008 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms