RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 UTYO14607 1347 aa15.68■□□□□ 0.1
CCDC90B-205ENST00000525916 ATRNL1Q5VV63 1379 aa15.68■□□□□ 0.1
CCDC90B-205ENST00000525916 CCER2I3L3R5 266 aa15.68■□□□□ 0.1
CCDC90B-205ENST00000525916 TNPO2O14787 897 aaKnown RBP15.68■□□□□ 0.1
CCDC90B-205ENST00000525916 IFIT1P09914 478 aaKnown RBP15.68■□□□□ 0.1
CCDC90B-205ENST00000525916 FGFR2P21802 821 aa15.68■□□□□ 0.1
CCDC90B-205ENST00000525916 PRDX5P30044 214 aa15.68■□□□□ 0.1
CCDC90B-205ENST00000525916 ZFPM1Q8IX07 1006 aa15.68■□□□□ 0.1
CCDC90B-205ENST00000525916 PXYLP1Q8TE99 480 aa15.68■□□□□ 0.1
CCDC90B-205ENST00000525916 PAK6Q9NQU5 681 aaPredicted RBP15.68■□□□□ 0.1
CCDC90B-205ENST00000525916 TAOK2Q9UL54 1235 aa15.68■□□□□ 0.1
CCDC90B-205ENST00000525916 CUL9Q8IWT3 2517 aa15.68■□□□□ 0.1
CCDC90B-205ENST00000525916 KIF16BQ96L93 1317 aa15.68■□□□□ 0.1
CCDC90B-205ENST00000525916 MNX1P50219 401 aaPredicted RBP15.67■□□□□ 0.1
CCDC90B-205ENST00000525916 IRF5Q13568 498 aa15.67■□□□□ 0.1
CCDC90B-205ENST00000525916 PUM3Q15397 648 aaKnown RBP15.67■□□□□ 0.1
CCDC90B-205ENST00000525916 FASTKD5Q7L8L6 764 aaKnown RBP15.67■□□□□ 0.1
CCDC90B-205ENST00000525916 WDR63Q8IWG1 891 aa15.67■□□□□ 0.1
CCDC90B-205ENST00000525916 SCYL3Q8IZE3 742 aa15.67■□□□□ 0.1
CCDC90B-205ENST00000525916 WDR66Q8TBY9 1149 aa15.67■□□□□ 0.1
CCDC90B-205ENST00000525916 GDF15Q99988 308 aa15.67■□□□□ 0.1
CCDC90B-205ENST00000525916 CRISPLD2Q9H0B8 497 aa15.67■□□□□ 0.1
CCDC90B-205ENST00000525916 ZHX2Q9Y6X8 837 aa15.67■□□□□ 0.1
CCDC90B-205ENST00000525916 UNC80Q8N2C7 3258 aa15.67■□□□□ 0.1
CCDC90B-205ENST00000525916 PHF20L1A8MW92 1017 aa15.66■□□□□ 0.1
CCDC90B-205ENST00000525916 PTPRAP18433 802 aa15.66■□□□□ 0.1
CCDC90B-205ENST00000525916 NCBP3Q53F19 620 aaKnown RBP15.66■□□□□ 0.1
CCDC90B-205ENST00000525916 Q7L0L9 218 aa15.66■□□□□ 0.1
CCDC90B-205ENST00000525916 C7orf61Q8IZ16 206 aa15.66■□□□□ 0.1
CCDC90B-205ENST00000525916 SMCR8Q8TEV9 937 aaPredicted RBP15.66■□□□□ 0.1
CCDC90B-205ENST00000525916 USP40Q9NVE5 1235 aa15.66■□□□□ 0.1
CCDC90B-205ENST00000525916 ZMYND8Q9ULU4 1186 aaPredicted RBP15.66■□□□□ 0.1
CCDC90B-205ENST00000525916 FRMPD3Q5JV73 1810 aa15.66■□□□□ 0.1
CCDC90B-205ENST00000525916 SLURP2P0DP57 97 aa15.65■□□□□ 0.1
CCDC90B-205ENST00000525916 SLC5A1P13866 664 aa15.65■□□□□ 0.1
CCDC90B-205ENST00000525916 NECAB2Q7Z6G3 386 aa15.65■□□□□ 0.1
CCDC90B-205ENST00000525916 MIER1Q8N108 512 aa15.65■□□□□ 0.1
CCDC90B-205ENST00000525916 DEFB123Q8N688 67 aa15.65■□□□□ 0.1
CCDC90B-205ENST00000525916 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.65■□□□□ 0.1
CCDC90B-205ENST00000525916 PICK1Q9NRD5 415 aa15.65■□□□□ 0.1
CCDC90B-205ENST00000525916 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.65■□□□□ 0.1
CCDC90B-205ENST00000525916 SLC45A1Q9Y2W3 748 aa15.65■□□□□ 0.1
CCDC90B-205ENST00000525916 AFG3L2Q9Y4W6 797 aa15.65■□□□□ 0.1
CCDC90B-205ENST00000525916 CAPN2P17655 700 aa15.64■□□□□ 0.09
CCDC90B-205ENST00000525916 BMP8BP34820 402 aa15.64■□□□□ 0.09
CCDC90B-205ENST00000525916 RGS3P49796 1198 aa15.64■□□□□ 0.09
CCDC90B-205ENST00000525916 CCDC84Q86UT8 332 aaPredicted RBP15.64■□□□□ 0.09
CCDC90B-205ENST00000525916 ANKRD13CQ8N6S4 541 aa15.64■□□□□ 0.09
CCDC90B-205ENST00000525916 RFX7Q2KHR2 1363 aa15.63■□□□□ 0.09
CCDC90B-205ENST00000525916 TRIM75PA6NK02 468 aa15.63■□□□□ 0.09
CCDC90B-205ENST00000525916 LDHBP07195 334 aaKnown RBP15.63■□□□□ 0.09
CCDC90B-205ENST00000525916 SYN1P17600 705 aa15.63■□□□□ 0.09
CCDC90B-205ENST00000525916 COA7Q96BR5 231 aa15.63■□□□□ 0.09
CCDC90B-205ENST00000525916 GPR153Q6NV75 609 aa15.62■□□□□ 0.09
CCDC90B-205ENST00000525916 SH3BP5LQ7L8J4 393 aa15.62■□□□□ 0.09
CCDC90B-205ENST00000525916 LPIN2Q92539 896 aa15.62■□□□□ 0.09
CCDC90B-205ENST00000525916 AGTPBP1Q9UPW5 1226 aa15.62■□□□□ 0.09
CCDC90B-205ENST00000525916 DDTLA6NHG4 134 aaPredicted RBP15.61■□□□□ 0.09
CCDC90B-205ENST00000525916 ENTPD3O75355 529 aa15.61■□□□□ 0.09
CCDC90B-205ENST00000525916 MAGEA10P43363 369 aaPredicted RBP15.61■□□□□ 0.09
CCDC90B-205ENST00000525916 FAM110CQ1W6H9 321 aa15.61■□□□□ 0.09
CCDC90B-205ENST00000525916 TREML2Q5T2D2 321 aa15.61■□□□□ 0.09
CCDC90B-205ENST00000525916 ZSCAN29Q8IWY8 852 aaPredicted RBP15.61■□□□□ 0.09
CCDC90B-205ENST00000525916 ANKLE1Q8NAG6 615 aa15.61■□□□□ 0.09
CCDC90B-205ENST00000525916 IDI2Q9BXS1 227 aa15.61■□□□□ 0.09
CCDC90B-205ENST00000525916 STXBP5LQ9Y2K9 1186 aa15.61■□□□□ 0.09
CCDC90B-205ENST00000525916 LRRFIP2Q9Y608 721 aaKnown RBP15.61■□□□□ 0.09
CCDC90B-205ENST00000525916 EYA2O00167 538 aa15.6■□□□□ 0.09
CCDC90B-205ENST00000525916 HMGCRP04035 888 aa15.6■□□□□ 0.09
CCDC90B-205ENST00000525916 RFX5P48382 616 aaPredicted RBP15.6■□□□□ 0.09
CCDC90B-205ENST00000525916 TRIM32Q13049 653 aa15.6■□□□□ 0.09
CCDC90B-205ENST00000525916 LRIT3Q3SXY7 679 aa15.6■□□□□ 0.09
CCDC90B-205ENST00000525916 DDX4Q9NQI0 724 aaKnown RBP15.6■□□□□ 0.09
CCDC90B-205ENST00000525916 MTMR10Q9NXD2 777 aa15.6■□□□□ 0.09
CCDC90B-205ENST00000525916 SALL1Q9NSC2 1324 aa15.6■□□□□ 0.09
CCDC90B-205ENST00000525916 CDK5RAP2Q96SN8 1893 aa15.59■□□□□ 0.09
CCDC90B-205ENST00000525916 CTNND1O60716 968 aaKnown RBP15.59■□□□□ 0.09
CCDC90B-205ENST00000525916 MAP3K10Q02779 954 aa15.59■□□□□ 0.09
CCDC90B-205ENST00000525916 ATG9AQ7Z3C6 839 aa15.59■□□□□ 0.09
CCDC90B-205ENST00000525916 TDHQ8IZJ6 230 aa15.59■□□□□ 0.09
CCDC90B-205ENST00000525916 NBPF3Q9H094 633 aa15.59■□□□□ 0.09
CCDC90B-205ENST00000525916 LAMA2P24043 3122 aaKnown RBP15.59■□□□□ 0.09
CCDC90B-205ENST00000525916 GAKO14976 1311 aa15.59■□□□□ 0.09
CCDC90B-205ENST00000525916 MAST2Q6P0Q8 1798 aa15.59■□□□□ 0.09
CCDC90B-205ENST00000525916 SIPA1L1O43166 1804 aa15.59■□□□□ 0.09
CCDC90B-205ENST00000525916 PHKA1P46020 1223 aa15.58■□□□□ 0.08
CCDC90B-205ENST00000525916 PICALMQ13492 652 aa15.58■□□□□ 0.08
CCDC90B-205ENST00000525916 ATP2B3Q16720 1220 aa15.58■□□□□ 0.08
CCDC90B-205ENST00000525916 USP44Q9H0E7 712 aa15.58■□□□□ 0.08
CCDC90B-205ENST00000525916 C11orf49Q9H6J7 331 aa15.58■□□□□ 0.08
CCDC90B-205ENST00000525916 HMX1Q9NP08 348 aaPredicted RBP15.58■□□□□ 0.08
CCDC90B-205ENST00000525916 PNMA3Q9UL41 463 aa15.58■□□□□ 0.08
CCDC90B-205ENST00000525916 RPTORQ8N122 1335 aa15.58■□□□□ 0.08
CCDC90B-205ENST00000525916 DNAH12Q6ZR08 3092 aa15.57■□□□□ 0.08
CCDC90B-205ENST00000525916 EYSQ5T1H1 3165 aa15.57■□□□□ 0.08
CCDC90B-205ENST00000525916 FAM196BA6NMK8 535 aa15.57■□□□□ 0.08
CCDC90B-205ENST00000525916 COL25A1Q9BXS0 654 aaPredicted RBP15.57■□□□□ 0.08
CCDC90B-205ENST00000525916 UBE2OQ9C0C9 1292 aaKnown RBP15.57■□□□□ 0.08
CCDC90B-205ENST00000525916 SIL1Q9H173 461 aa15.57■□□□□ 0.08
CCDC90B-205ENST00000525916 GNL3LQ9NVN8 582 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms