RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 SP3Q02447 781 aa14.27□□□□□ -0.13
HIF3A-209ENST00000525854 ARHGEF6Q15052 776 aa14.27□□□□□ -0.13
HIF3A-209ENST00000525854 NOL9Q5SY16 702 aaKnown RBP14.27□□□□□ -0.13
HIF3A-209ENST00000525854 CEP85Q6P2H3 762 aa14.27□□□□□ -0.13
HIF3A-209ENST00000525854 ERC1Q8IUD2 1116 aa14.27□□□□□ -0.13
HIF3A-209ENST00000525854 ZFPM1Q8IX07 1006 aa14.27□□□□□ -0.13
HIF3A-209ENST00000525854 ZNF512BQ96KM6 892 aaPredicted RBP14.27□□□□□ -0.13
HIF3A-209ENST00000525854 DBNDD2Q9BQY9 259 aa14.27□□□□□ -0.13
HIF3A-209ENST00000525854 NOL10Q9BSC4 688 aaKnown RBP14.27□□□□□ -0.13
HIF3A-209ENST00000525854 TRIM17Q9Y577 477 aa14.27□□□□□ -0.13
HIF3A-209ENST00000525854 RHBDL3P58872 404 aa14.26□□□□□ -0.13
HIF3A-209ENST00000525854 PICALMQ13492 652 aa14.26□□□□□ -0.13
HIF3A-209ENST00000525854 HSP90AB4PQ58FF6 505 aa14.26□□□□□ -0.13
HIF3A-209ENST00000525854 FAM43AQ8N2R8 423 aa14.26□□□□□ -0.13
HIF3A-209ENST00000525854 ZNF384Q8TF68 577 aa14.26□□□□□ -0.13
HIF3A-209ENST00000525854 CHMP4BQ9H444 224 aaKnown RBP14.26□□□□□ -0.13
HIF3A-209ENST00000525854 PICK1Q9NRD5 415 aa14.26□□□□□ -0.13
HIF3A-209ENST00000525854 BAG3O95817 575 aa14.25□□□□□ -0.13
HIF3A-209ENST00000525854 SH3BP5LQ7L8J4 393 aa14.25□□□□□ -0.13
HIF3A-209ENST00000525854 OTOP1Q7RTM1 612 aa14.25□□□□□ -0.13
HIF3A-209ENST00000525854 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.25□□□□□ -0.13
HIF3A-209ENST00000525854 DDX4Q9NQI0 724 aaKnown RBP14.25□□□□□ -0.13
HIF3A-209ENST00000525854 SNRKQ9NRH2 765 aa14.25□□□□□ -0.13
HIF3A-209ENST00000525854 DDX19BQ9UMR2 479 aa14.25□□□□□ -0.13
HIF3A-209ENST00000525854 KCNH4Q9UQ05 1017 aa14.25□□□□□ -0.13
HIF3A-209ENST00000525854 MYH2Q9UKX2 1941 aa14.25□□□□□ -0.13
HIF3A-209ENST00000525854 ATRNL1Q5VV63 1379 aa14.24□□□□□ -0.13
HIF3A-209ENST00000525854 DDTLA6NHG4 134 aaPredicted RBP14.24□□□□□ -0.13
HIF3A-209ENST00000525854 PHF20L1A8MW92 1017 aa14.24□□□□□ -0.13
HIF3A-209ENST00000525854 BTBD19C9JJ37 291 aa14.24□□□□□ -0.13
HIF3A-209ENST00000525854 HMMRO75330 724 aa14.24□□□□□ -0.13
HIF3A-209ENST00000525854 PLCG2P16885 1265 aa14.24□□□□□ -0.13
HIF3A-209ENST00000525854 SOX10P56693 466 aa14.24□□□□□ -0.13
HIF3A-209ENST00000525854 MAP3K10Q02779 954 aa14.24□□□□□ -0.13
HIF3A-209ENST00000525854 NAA16Q6N069 864 aaPredicted RBP14.24□□□□□ -0.13
HIF3A-209ENST00000525854 SCYL3Q8IZE3 742 aa14.24□□□□□ -0.13
HIF3A-209ENST00000525854 CD99L2Q8TCZ2 262 aa14.24□□□□□ -0.13
HIF3A-209ENST00000525854 EFCC1Q9HA90 598 aa14.24□□□□□ -0.13
HIF3A-209ENST00000525854 DBNLQ9UJU6 430 aaKnown RBP14.24□□□□□ -0.13
HIF3A-209ENST00000525854 RCAN3Q9UKA8 241 aa14.24□□□□□ -0.13
HIF3A-209ENST00000525854 CXCL11O14625 94 aa14.23□□□□□ -0.13
HIF3A-209ENST00000525854 TBC1D12O60347 775 aa14.23□□□□□ -0.13
HIF3A-209ENST00000525854 TLR2O60603 784 aa14.23□□□□□ -0.13
HIF3A-209ENST00000525854 CTNND1O60716 968 aaKnown RBP14.23□□□□□ -0.13
HIF3A-209ENST00000525854 ANKRD23Q86SG2 305 aa14.23□□□□□ -0.13
HIF3A-209ENST00000525854 RPAP2Q8IXW5 612 aaPredicted RBP14.23□□□□□ -0.13
HIF3A-209ENST00000525854 TEX11Q8IYF3 940 aa14.23□□□□□ -0.13
HIF3A-209ENST00000525854 EAF2Q96CJ1 260 aaPredicted RBP14.23□□□□□ -0.13
HIF3A-209ENST00000525854 AK9Q5TCS8 1911 aa14.23□□□□□ -0.13
HIF3A-209ENST00000525854 CYP2E1P05181 493 aaPredicted RBP14.22□□□□□ -0.13
HIF3A-209ENST00000525854 KIF22Q14807 665 aa14.22□□□□□ -0.13
HIF3A-209ENST00000525854 CCDC8Q9H0W5 538 aaPredicted RBP14.22□□□□□ -0.13
HIF3A-209ENST00000525854 EXOC6BQ9Y2D4 811 aa14.22□□□□□ -0.13
HIF3A-209ENST00000525854 PTPN22Q9Y2R2 807 aa14.22□□□□□ -0.13
HIF3A-209ENST00000525854 COG6Q9Y2V7 657 aa14.22□□□□□ -0.13
HIF3A-209ENST00000525854 ZHX2Q9Y6X8 837 aa14.22□□□□□ -0.13
HIF3A-209ENST00000525854 COL2A1P02458 1487 aaPredicted RBP14.21□□□□□ -0.13
HIF3A-209ENST00000525854 PDHXO00330 501 aa14.21□□□□□ -0.13
HIF3A-209ENST00000525854 PTPRAP18433 802 aa14.21□□□□□ -0.13
HIF3A-209ENST00000525854 ZAP70P43403 619 aa14.21□□□□□ -0.13
HIF3A-209ENST00000525854 PPP4CP60510 307 aa14.21□□□□□ -0.13
HIF3A-209ENST00000525854 FASTKD5Q7L8L6 764 aaKnown RBP14.21□□□□□ -0.13
HIF3A-209ENST00000525854 AACSQ86V21 672 aa14.21□□□□□ -0.13
HIF3A-209ENST00000525854 SH3RF3Q8TEJ3 882 aaPredicted RBP14.21□□□□□ -0.13
HIF3A-209ENST00000525854 OSBPL5Q9H0X9 879 aaPredicted RBP14.21□□□□□ -0.13
HIF3A-209ENST00000525854 DHX36Q9H2U1 1008 aaKnown RBP14.21□□□□□ -0.13
HIF3A-209ENST00000525854 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.21□□□□□ -0.13
HIF3A-209ENST00000525854 ZBTB40Q9NUA8 1239 aa14.21□□□□□ -0.13
HIF3A-209ENST00000525854 TLR7Q9NYK1 1049 aaKnown RBP14.21□□□□□ -0.13
HIF3A-209ENST00000525854 TMED8Q6PL24 325 aaPredicted RBP14.2□□□□□ -0.14
HIF3A-209ENST00000525854 RHPN1Q8TCX5 695 aa14.2□□□□□ -0.14
HIF3A-209ENST00000525854 PIH1D3Q9NQM4 214 aaKnown RBP14.2□□□□□ -0.14
HIF3A-209ENST00000525854 AATFQ9NY61 560 aaKnown RBP eCLIP14.2□□□□□ -0.14
HIF3A-209ENST00000525854 IDH1O75874 414 aaKnown RBP14.19□□□□□ -0.14
HIF3A-209ENST00000525854 GNRH1P01148 92 aa14.19□□□□□ -0.14
HIF3A-209ENST00000525854 LACTBP83111 547 aaPredicted RBP14.19□□□□□ -0.14
HIF3A-209ENST00000525854 CERS3Q8IU89 383 aa14.19□□□□□ -0.14
HIF3A-209ENST00000525854 CLASRPQ8N2M8 674 aaKnown RBP14.19□□□□□ -0.14
HIF3A-209ENST00000525854 KIF1BPQ96EK5 621 aa14.19□□□□□ -0.14
HIF3A-209ENST00000525854 PARK7Q99497 189 aaKnown RBP14.19□□□□□ -0.14
HIF3A-209ENST00000525854 PI4KBQ9UBF8 816 aa14.19□□□□□ -0.14
HIF3A-209ENST00000525854 HERC5Q9UII4 1024 aaKnown RBP14.19□□□□□ -0.14
HIF3A-209ENST00000525854 AFG3L2Q9Y4W6 797 aa14.19□□□□□ -0.14
HIF3A-209ENST00000525854 DOCK2Q92608 1830 aa14.19□□□□□ -0.14
HIF3A-209ENST00000525854 A0A0G2JLL6 359 aaPredicted RBP14.18□□□□□ -0.14
HIF3A-209ENST00000525854 RAB11FIP3O75154 756 aa14.18□□□□□ -0.14
HIF3A-209ENST00000525854 CYP7A1P22680 504 aa14.18□□□□□ -0.14
HIF3A-209ENST00000525854 MAP3K12Q12852 859 aa14.18□□□□□ -0.14
HIF3A-209ENST00000525854 MOGSQ13724 837 aa14.18□□□□□ -0.14
HIF3A-209ENST00000525854 PDE3AQ14432 1141 aa14.18□□□□□ -0.14
HIF3A-209ENST00000525854 C17orf99Q6UX52 265 aa14.18□□□□□ -0.14
HIF3A-209ENST00000525854 PRRT2Q7Z6L0 340 aaPredicted RBP14.18□□□□□ -0.14
HIF3A-209ENST00000525854 TGFBRAP1Q8WUH2 860 aa14.18□□□□□ -0.14
HIF3A-209ENST00000525854 TBC1D2Q9BYX2 928 aa14.18□□□□□ -0.14
HIF3A-209ENST00000525854 IL1RAPL2Q9NP60 686 aa14.18□□□□□ -0.14
HIF3A-209ENST00000525854 IFIT2P09913 472 aaKnown RBP14.17□□□□□ -0.14
HIF3A-209ENST00000525854 TTF1Q15361 905 aaPredicted RBP14.17□□□□□ -0.14
HIF3A-209ENST00000525854 ADGRA1Q86SQ6 560 aa14.17□□□□□ -0.14
HIF3A-209ENST00000525854 NBPF11Q86T75 865 aa14.17□□□□□ -0.14
HIF3A-209ENST00000525854 FOXP4Q8IVH2 680 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms