RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 CAP1Q01518 475 aa12.83□□□□□ -0.36
RBBP4-216ENST00000525506 PICALMQ13492 652 aa12.83□□□□□ -0.36
RBBP4-216ENST00000525506 AAMPQ13685 434 aa12.83□□□□□ -0.36
RBBP4-216ENST00000525506 OTUD7BQ6GQQ9 843 aa12.83□□□□□ -0.36
RBBP4-216ENST00000525506 ERO1BQ86YB8 467 aa12.83□□□□□ -0.36
RBBP4-216ENST00000525506 FAM163AQ96GL9 167 aaPredicted RBP12.83□□□□□ -0.36
RBBP4-216ENST00000525506 TLR7Q9NYK1 1049 aaKnown RBP12.83□□□□□ -0.36
RBBP4-216ENST00000525506 RAI14Q9P0K7 980 aa12.83□□□□□ -0.36
RBBP4-216ENST00000525506 RFX7Q2KHR2 1363 aa12.82□□□□□ -0.36
RBBP4-216ENST00000525506 DDTLA6NHG4 134 aaPredicted RBP12.82□□□□□ -0.36
RBBP4-216ENST00000525506 RAB11FIP3O75154 756 aa12.82□□□□□ -0.36
RBBP4-216ENST00000525506 RGS19P49795 217 aa12.82□□□□□ -0.36
RBBP4-216ENST00000525506 TTC39AQ5SRH9 613 aa12.82□□□□□ -0.36
RBBP4-216ENST00000525506 ZSCAN29Q8IWY8 852 aaPredicted RBP12.82□□□□□ -0.36
RBBP4-216ENST00000525506 SLF2Q8IX21 1173 aa12.82□□□□□ -0.36
RBBP4-216ENST00000525506 SIRT2Q8IXJ6 389 aa12.82□□□□□ -0.36
RBBP4-216ENST00000525506 CD99L2Q8TCZ2 262 aa12.82□□□□□ -0.36
RBBP4-216ENST00000525506 NSUN4Q96CB9 384 aaKnown RBP12.82□□□□□ -0.36
RBBP4-216ENST00000525506 IDI2Q9BXS1 227 aa12.82□□□□□ -0.36
RBBP4-216ENST00000525506 CCDC8Q9H0W5 538 aaPredicted RBP12.82□□□□□ -0.36
RBBP4-216ENST00000525506 ZNF112Q9UJU3 913 aa12.82□□□□□ -0.36
RBBP4-216ENST00000525506 TRIM17Q9Y577 477 aa12.82□□□□□ -0.36
RBBP4-216ENST00000525506 PHIPQ8WWQ0 1821 aa12.81□□□□□ -0.36
RBBP4-216ENST00000525506 GPR75-ASB3A0A0A6YYF3 556 aa12.81□□□□□ -0.36
RBBP4-216ENST00000525506 ENTPD3O75355 529 aa12.81□□□□□ -0.36
RBBP4-216ENST00000525506 RHBDL3P58872 404 aa12.81□□□□□ -0.36
RBBP4-216ENST00000525506 PPIL2Q13356 520 aa12.81□□□□□ -0.36
RBBP4-216ENST00000525506 TAF1CQ15572 869 aaPredicted RBP12.81□□□□□ -0.36
RBBP4-216ENST00000525506 PKN2Q16513 984 aaKnown RBP12.81□□□□□ -0.36
RBBP4-216ENST00000525506 CCDC158Q5M9N0 1113 aa12.81□□□□□ -0.36
RBBP4-216ENST00000525506 EAF2Q96CJ1 260 aaPredicted RBP12.81□□□□□ -0.36
RBBP4-216ENST00000525506 KIF1BPQ96EK5 621 aa12.81□□□□□ -0.36
RBBP4-216ENST00000525506 LRP2BPQ9P2M1 347 aa12.81□□□□□ -0.36
RBBP4-216ENST00000525506 DBNLQ9UJU6 430 aaKnown RBP12.81□□□□□ -0.36
RBBP4-216ENST00000525506 EXOC6BQ9Y2D4 811 aa12.81□□□□□ -0.36
RBBP4-216ENST00000525506 MAST2Q6P0Q8 1798 aa12.81□□□□□ -0.36
RBBP4-216ENST00000525506 ATRNL1Q5VV63 1379 aa12.81□□□□□ -0.36
RBBP4-216ENST00000525506 DOCK1Q14185 1865 aa12.8□□□□□ -0.36
RBBP4-216ENST00000525506 PTPRFP10586 1907 aa12.8□□□□□ -0.36
RBBP4-216ENST00000525506 TNRC18O15417 2968 aaPredicted RBP12.8□□□□□ -0.36
RBBP4-216ENST00000525506 PHF20L1A8MW92 1017 aa12.8□□□□□ -0.36
RBBP4-216ENST00000525506 BTBD19C9JJ37 291 aa12.8□□□□□ -0.36
RBBP4-216ENST00000525506 CYP2E1P05181 493 aaPredicted RBP12.8□□□□□ -0.36
RBBP4-216ENST00000525506 CETPP11597 493 aa12.8□□□□□ -0.36
RBBP4-216ENST00000525506 MLLT1Q03111 559 aaPredicted RBP12.8□□□□□ -0.36
RBBP4-216ENST00000525506 SNAPC2Q13487 334 aa12.8□□□□□ -0.36
RBBP4-216ENST00000525506 FBXO46Q6PJ61 603 aaPredicted RBP12.8□□□□□ -0.36
RBBP4-216ENST00000525506 TMED8Q6PL24 325 aaPredicted RBP12.8□□□□□ -0.36
RBBP4-216ENST00000525506 OTOP1Q7RTM1 612 aa12.8□□□□□ -0.36
RBBP4-216ENST00000525506 ATAD5Q96QE3 1844 aa12.8□□□□□ -0.36
RBBP4-216ENST00000525506 FOCADQ5VW36 1801 aa12.79□□□□□ -0.36
RBBP4-216ENST00000525506 FAM196BA6NMK8 535 aa12.79□□□□□ -0.36
RBBP4-216ENST00000525506 LDHCP07864 332 aa12.79□□□□□ -0.36
RBBP4-216ENST00000525506 ZAP70P43403 619 aa12.79□□□□□ -0.36
RBBP4-216ENST00000525506 GSTO1P78417 241 aa12.79□□□□□ -0.36
RBBP4-216ENST00000525506 SP3Q02447 781 aa12.79□□□□□ -0.36
RBBP4-216ENST00000525506 PPATQ06203 517 aa12.79□□□□□ -0.36
RBBP4-216ENST00000525506 NOL9Q5SY16 702 aaKnown RBP12.79□□□□□ -0.36
RBBP4-216ENST00000525506 CLASRPQ8N2M8 674 aaKnown RBP12.79□□□□□ -0.36
RBBP4-216ENST00000525506 RHPN1Q8TCX5 695 aa12.79□□□□□ -0.36
RBBP4-216ENST00000525506 SH3RF3Q8TEJ3 882 aaPredicted RBP12.79□□□□□ -0.36
RBBP4-216ENST00000525506 BCL11AQ9H165 835 aa12.79□□□□□ -0.36
RBBP4-216ENST00000525506 ZFYVE28Q9HCC9 887 aa12.79□□□□□ -0.36
RBBP4-216ENST00000525506 PIH1D3Q9NQM4 214 aaKnown RBP12.79□□□□□ -0.36
RBBP4-216ENST00000525506 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.79□□□□□ -0.36
RBBP4-216ENST00000525506 NDUFB9Q9Y6M9 179 aa12.79□□□□□ -0.36
RBBP4-216ENST00000525506 SIPA1L1O43166 1804 aa12.78□□□□□ -0.36
RBBP4-216ENST00000525506 APBB1O00213 710 aa12.78□□□□□ -0.36
RBBP4-216ENST00000525506 ECM2O94769 699 aaPredicted RBP12.78□□□□□ -0.36
RBBP4-216ENST00000525506 MAP4K4O95819 1239 aaPredicted RBP12.78□□□□□ -0.36
RBBP4-216ENST00000525506 NAA16Q6N069 864 aaPredicted RBP12.78□□□□□ -0.36
RBBP4-216ENST00000525506 ADGRA1Q86SQ6 560 aa12.78□□□□□ -0.36
RBBP4-216ENST00000525506 CCDC84Q86UT8 332 aaPredicted RBP12.78□□□□□ -0.36
RBBP4-216ENST00000525506 ERO1AQ96HE7 468 aa12.78□□□□□ -0.36
RBBP4-216ENST00000525506 IL1RAPL2Q9NP60 686 aa12.78□□□□□ -0.36
RBBP4-216ENST00000525506 HTTP42858 3142 aa12.78□□□□□ -0.36
RBBP4-216ENST00000525506 MAP3K10Q02779 954 aa12.77□□□□□ -0.37
RBBP4-216ENST00000525506 MOGSQ13724 837 aa12.77□□□□□ -0.37
RBBP4-216ENST00000525506 AACSQ86V21 672 aa12.77□□□□□ -0.37
RBBP4-216ENST00000525506 TEX11Q8IYF3 940 aa12.77□□□□□ -0.37
RBBP4-216ENST00000525506 SCYL3Q8IZE3 742 aa12.77□□□□□ -0.37
RBBP4-216ENST00000525506 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.77□□□□□ -0.37
RBBP4-216ENST00000525506 ARHGAP39Q9C0H5 1083 aa12.77□□□□□ -0.37
RBBP4-216ENST00000525506 EFCC1Q9HA90 598 aa12.77□□□□□ -0.37
RBBP4-216ENST00000525506 AATFQ9NY61 560 aaKnown RBP eCLIP12.77□□□□□ -0.37
RBBP4-216ENST00000525506 KCNH4Q9UQ05 1017 aa12.77□□□□□ -0.37
RBBP4-216ENST00000525506 MYH1P12882 1939 aa12.77□□□□□ -0.37
RBBP4-216ENST00000525506 PDHXO00330 501 aa12.76□□□□□ -0.37
RBBP4-216ENST00000525506 PTPRAP18433 802 aa12.76□□□□□ -0.37
RBBP4-216ENST00000525506 OSBPL5Q9H0X9 879 aaPredicted RBP12.76□□□□□ -0.37
RBBP4-216ENST00000525506 ANTXR1Q9H6X2 564 aa12.76□□□□□ -0.37
RBBP4-216ENST00000525506 DCTPP1Q9H773 170 aa12.76□□□□□ -0.37
RBBP4-216ENST00000525506 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.76□□□□□ -0.37
RBBP4-216ENST00000525506 PICK1Q9NRD5 415 aa12.76□□□□□ -0.37
RBBP4-216ENST00000525506 PTPN22Q9Y2R2 807 aa12.76□□□□□ -0.37
RBBP4-216ENST00000525506 ZHX2Q9Y6X8 837 aa12.76□□□□□ -0.37
RBBP4-216ENST00000525506 MGAMO43451 1857 aa12.76□□□□□ -0.37
RBBP4-216ENST00000525506 KIAA0100Q14667 2235 aaKnown RBP12.76□□□□□ -0.37
RBBP4-216ENST00000525506 TLR2O60603 784 aa12.75□□□□□ -0.37
RBBP4-216ENST00000525506 CENPFP49454 3210 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms