RNA–Protein interactions for RNA: ENST00000525443.1

LTBP3-204, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,162 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-204ENST00000525443 TMCO5BA8MYB1 307 aa16.85■□□□□ 0.29
LTBP3-204ENST00000525443 PDHBP11177 359 aa16.85■□□□□ 0.29
LTBP3-204ENST00000525443 SLC39A6Q13433 755 aa16.85■□□□□ 0.29
LTBP3-204ENST00000525443 CYP46A1Q9Y6A2 500 aa16.85■□□□□ 0.29
LTBP3-204ENST00000525443 FSBPO95073 299 aa16.85■□□□□ 0.29
LTBP3-204ENST00000525443 PRAMEF22A3QJZ6 481 aa16.84■□□□□ 0.29
LTBP3-204ENST00000525443 PPP1R12BO60237 982 aaPredicted RBP16.84■□□□□ 0.29
LTBP3-204ENST00000525443 STK3Q13188 491 aa16.84■□□□□ 0.29
LTBP3-204ENST00000525443 PRPF40BQ6NWY9 871 aaKnown RBP16.84■□□□□ 0.29
LTBP3-204ENST00000525443 SPDL1Q96EA4 605 aa16.84■□□□□ 0.29
LTBP3-204ENST00000525443 USP44Q9H0E7 712 aa16.84■□□□□ 0.29
LTBP3-204ENST00000525443 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.84■□□□□ 0.29
LTBP3-204ENST00000525443 PNMA6EA0A0J9YXQ4 647 aa16.84■□□□□ 0.29
LTBP3-204ENST00000525443 FAM76AQ8TAV0 307 aa16.84■□□□□ 0.29
LTBP3-204ENST00000525443 ARHGAP6O43182 974 aa16.83■□□□□ 0.29
LTBP3-204ENST00000525443 SNUPNO95149 360 aaKnown RBP16.83■□□□□ 0.29
LTBP3-204ENST00000525443 SSBP05455 408 aaKnown RBP eCLIP16.83■□□□□ 0.29
LTBP3-204ENST00000525443 TMEM139Q8IV31 216 aa16.83■□□□□ 0.29
LTBP3-204ENST00000525443 GBP3Q9H0R5 595 aa16.83■□□□□ 0.29
LTBP3-204ENST00000525443 RPS6KA3P51812 740 aa16.83■□□□□ 0.28
LTBP3-204ENST00000525443 GNGT1P63211 74 aa16.83■□□□□ 0.28
LTBP3-204ENST00000525443 RBBP5Q15291 538 aaKnown RBP16.83■□□□□ 0.28
LTBP3-204ENST00000525443 SDF4Q9BRK5 362 aa16.83■□□□□ 0.28
LTBP3-204ENST00000525443 TMEM232C9JQI7 657 aa16.83■□□□□ 0.28
LTBP3-204ENST00000525443 TRAF1Q13077 416 aa16.83■□□□□ 0.28
LTBP3-204ENST00000525443 FCHSD1Q86WN1 690 aa16.83■□□□□ 0.28
LTBP3-204ENST00000525443 IL1RAPL2Q9NP60 686 aa16.83■□□□□ 0.28
LTBP3-204ENST00000525443 PXDNQ92626 1479 aa16.83■□□□□ 0.28
LTBP3-204ENST00000525443 GGCXP38435 758 aa16.82■□□□□ 0.28
LTBP3-204ENST00000525443 AIMP1Q12904 312 aaKnown RBP16.82■□□□□ 0.28
LTBP3-204ENST00000525443 BRINP3Q76B58 766 aa16.82■□□□□ 0.28
LTBP3-204ENST00000525443 NUTM1Q86Y26 1132 aa16.82■□□□□ 0.28
LTBP3-204ENST00000525443 CAPS2Q9BXY5 557 aa16.82■□□□□ 0.28
LTBP3-204ENST00000525443 LZTFL1Q9NQ48 299 aa16.82■□□□□ 0.28
LTBP3-204ENST00000525443 DBF4Q9UBU7 674 aaPredicted RBP16.82■□□□□ 0.28
LTBP3-204ENST00000525443 CDC23Q9UJX2 597 aa16.82■□□□□ 0.28
LTBP3-204ENST00000525443 USP54Q70EL1 1684 aa16.82■□□□□ 0.28
LTBP3-204ENST00000525443 AARSP49588 968 aaKnown RBP eCLIP16.82■□□□□ 0.28
LTBP3-204ENST00000525443 FOSBP53539 338 aa16.82■□□□□ 0.28
LTBP3-204ENST00000525443 PDILTQ8N807 584 aa16.82■□□□□ 0.28
LTBP3-204ENST00000525443 PRDM11Q9NQV5 511 aa16.82■□□□□ 0.28
LTBP3-204ENST00000525443 ZNF335Q9H4Z2 1342 aaPredicted RBP16.82■□□□□ 0.28
LTBP3-204ENST00000525443 GIGYF1O75420 1035 aaPredicted RBP16.81■□□□□ 0.28
LTBP3-204ENST00000525443 GBP2P32456 591 aaPredicted RBP16.81■□□□□ 0.28
LTBP3-204ENST00000525443 CFAP100Q494V2 611 aa16.81■□□□□ 0.28
LTBP3-204ENST00000525443 FSIP1Q8NA03 581 aa16.81■□□□□ 0.28
LTBP3-204ENST00000525443 SPDYE1Q8NFV5 336 aaPredicted RBP16.81■□□□□ 0.28
LTBP3-204ENST00000525443 SCLT1Q96NL6 688 aa16.81■□□□□ 0.28
LTBP3-204ENST00000525443 MRPL44Q9H9J2 332 aaKnown RBP16.81■□□□□ 0.28
LTBP3-204ENST00000525443 HPCAL4Q9UM19 191 aa16.81■□□□□ 0.28
LTBP3-204ENST00000525443 EIF3HO15372 352 aaKnown RBP eCLIP16.81■□□□□ 0.28
LTBP3-204ENST00000525443 HOXB7P09629 217 aa16.81■□□□□ 0.28
LTBP3-204ENST00000525443 NAP1L1P55209 391 aaKnown RBP16.81■□□□□ 0.28
LTBP3-204ENST00000525443 UBASH3AP57075 661 aa16.81■□□□□ 0.28
LTBP3-204ENST00000525443 KCNB1Q14721 858 aa16.81■□□□□ 0.28
LTBP3-204ENST00000525443 CCDC40Q4G0X9 1142 aa16.81■□□□□ 0.28
LTBP3-204ENST00000525443 NOA1Q8NC60 698 aaKnown RBP16.81■□□□□ 0.28
LTBP3-204ENST00000525443 SPATA31A3Q5VYP0 1347 aa16.81■□□□□ 0.28
LTBP3-204ENST00000525443 RGPD2P0DJD1 1756 aa16.81■□□□□ 0.28
LTBP3-204ENST00000525443 TUBGCP6Q96RT7 1819 aa16.81■□□□□ 0.28
LTBP3-204ENST00000525443 SLIT3O75094 1523 aa16.81■□□□□ 0.28
LTBP3-204ENST00000525443 GOLGA6CA6NDK9 693 aa16.81■□□□□ 0.28
LTBP3-204ENST00000525443 GOLGA6L9A6NEM1 432 aa16.81■□□□□ 0.28
LTBP3-204ENST00000525443 MEFVO15553 781 aaPredicted RBP16.81■□□□□ 0.28
LTBP3-204ENST00000525443 EPB41L2O43491 1005 aaKnown RBP16.81■□□□□ 0.28
LTBP3-204ENST00000525443 GOLGA6DP0CG33 693 aa16.81■□□□□ 0.28
LTBP3-204ENST00000525443 TOP1P11387 765 aaKnown RBP16.81■□□□□ 0.28
LTBP3-204ENST00000525443 ATP8B2P98198 1209 aa16.81■□□□□ 0.28
LTBP3-204ENST00000525443 PTH1RQ03431 593 aa16.81■□□□□ 0.28
LTBP3-204ENST00000525443 ZSWIM6Q9HCJ5 1215 aa16.81■□□□□ 0.28
LTBP3-204ENST00000525443 GOLGA6AQ9NYA3 693 aa16.81■□□□□ 0.28
LTBP3-204ENST00000525443 GRIN2DO15399 1336 aa16.81■□□□□ 0.28
LTBP3-204ENST00000525443 A0A0U1RQJ8 604 aa16.8■□□□□ 0.28
LTBP3-204ENST00000525443 SERPINC1P01008 464 aa16.8■□□□□ 0.28
LTBP3-204ENST00000525443 RESTQ13127 1097 aa16.8■□□□□ 0.28
LTBP3-204ENST00000525443 NCAPHQ15003 741 aa16.8■□□□□ 0.28
LTBP3-204ENST00000525443 PROSER3Q2NL68 480 aa16.8■□□□□ 0.28
LTBP3-204ENST00000525443 TBC1D25Q3MII6 688 aa16.8■□□□□ 0.28
LTBP3-204ENST00000525443 RNF187Q5TA31 235 aaPredicted RBP16.8■□□□□ 0.28
LTBP3-204ENST00000525443 TLDC1Q6P9B6 456 aa16.8■□□□□ 0.28
LTBP3-204ENST00000525443 ATRIPQ8WXE1 791 aa16.8■□□□□ 0.28
LTBP3-204ENST00000525443 PAIP2Q9BPZ3 127 aaKnown RBP16.8■□□□□ 0.28
LTBP3-204ENST00000525443 SLAIN2Q9P270 581 aa16.8■□□□□ 0.28
LTBP3-204ENST00000525443 NDUFAB1O14561 156 aa16.8■□□□□ 0.28
LTBP3-204ENST00000525443 EZRP15311 586 aaKnown RBP16.8■□□□□ 0.28
LTBP3-204ENST00000525443 ICA1Q05084 483 aa16.8■□□□□ 0.28
LTBP3-204ENST00000525443 JAK2O60674 1132 aa16.79■□□□□ 0.28
LTBP3-204ENST00000525443 NBPF7P0C2Y1 421 aaPredicted RBP16.79■□□□□ 0.28
LTBP3-204ENST00000525443 ENGASEQ8NFI3 743 aa16.79■□□□□ 0.28
LTBP3-204ENST00000525443 KDM4FA0A1W2PPD8 638 aa16.79■□□□□ 0.28
LTBP3-204ENST00000525443 FAM160A1Q05DH4 1040 aa16.79■□□□□ 0.28
LTBP3-204ENST00000525443 KIF4BQ2VIQ3 1234 aa16.79■□□□□ 0.28
LTBP3-204ENST00000525443 FAM228AQ86W67 206 aa16.79■□□□□ 0.28
LTBP3-204ENST00000525443 SLC40A1Q9NP59 571 aa16.79■□□□□ 0.28
LTBP3-204ENST00000525443 FANCLQ9NW38 375 aa16.79■□□□□ 0.28
LTBP3-204ENST00000525443 CFAP45Q9UL16 551 aa16.79■□□□□ 0.28
LTBP3-204ENST00000525443 RAB11FIP3O75154 756 aa16.79■□□□□ 0.28
LTBP3-204ENST00000525443 AKAP17AQ02040 695 aaKnown RBP16.79■□□□□ 0.28
LTBP3-204ENST00000525443 MTX1Q13505 466 aa16.79■□□□□ 0.28
LTBP3-204ENST00000525443 STIM1Q13586 685 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms