RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 ZNF70Q9UC06 446 aaPredicted RBP18.87■□□□□ 0.61
TSPAN4-213ENST00000524895 LAMB1P07942 1786 aa18.86■□□□□ 0.61
TSPAN4-213ENST00000524895 SLC27A2O14975 620 aa18.86■□□□□ 0.61
TSPAN4-213ENST00000524895 ZKSCAN1P17029 563 aaPredicted RBP18.86■□□□□ 0.61
TSPAN4-213ENST00000524895 RBM25P49756 843 aaKnown RBP18.86■□□□□ 0.61
TSPAN4-213ENST00000524895 NFIAQ12857 509 aa18.86■□□□□ 0.61
TSPAN4-213ENST00000524895 TRPM4Q8TD43 1214 aa18.86■□□□□ 0.61
TSPAN4-213ENST00000524895 IDI2Q9BXS1 227 aa18.86■□□□□ 0.61
TSPAN4-213ENST00000524895 HACL1Q9UJ83 578 aa18.86■□□□□ 0.61
TSPAN4-213ENST00000524895 WDR90Q96KV7 1748 aa18.86■□□□□ 0.61
TSPAN4-213ENST00000524895 IQCA1LA6NCM1 817 aa18.85■□□□□ 0.61
TSPAN4-213ENST00000524895 ZNF213O14771 459 aa18.85■□□□□ 0.61
TSPAN4-213ENST00000524895 DDX4Q9NQI0 724 aaKnown RBP18.85■□□□□ 0.61
TSPAN4-213ENST00000524895 MKRN1Q9UHC7 482 aaKnown RBP18.85■□□□□ 0.61
TSPAN4-213ENST00000524895 SAP30BPQ9UHR5 308 aaKnown RBP18.85■□□□□ 0.61
TSPAN4-213ENST00000524895 PALD1Q9ULE6 856 aa18.85■□□□□ 0.61
TSPAN4-213ENST00000524895 BAZ2AQ9UIF9 1905 aaKnown RBP18.84■□□□□ 0.61
TSPAN4-213ENST00000524895 MINDY4BA8MYZ0 360 aa18.84■□□□□ 0.61
TSPAN4-213ENST00000524895 USP17L12C9JPN9 530 aa18.84■□□□□ 0.61
TSPAN4-213ENST00000524895 USP17L21D6R901 530 aa18.84■□□□□ 0.61
TSPAN4-213ENST00000524895 NPM3O75607 178 aaKnown RBP18.84■□□□□ 0.61
TSPAN4-213ENST00000524895 CYP21A2P08686 494 aa18.84■□□□□ 0.61
TSPAN4-213ENST00000524895 HAND2P61296 217 aa18.84■□□□□ 0.61
TSPAN4-213ENST00000524895 CTR9Q6PD62 1173 aa18.84■□□□□ 0.61
TSPAN4-213ENST00000524895 OSBPL5Q9H0X9 879 aaPredicted RBP18.84■□□□□ 0.61
TSPAN4-213ENST00000524895 SCN4AP35499 1836 aa18.84■□□□□ 0.61
TSPAN4-213ENST00000524895 TCP10L2B9ZVM9 353 aa18.83■□□□□ 0.6
TSPAN4-213ENST00000524895 ENTPD3O75355 529 aa18.83■□□□□ 0.6
TSPAN4-213ENST00000524895 POLR3DP05423 398 aaPredicted RBP18.83■□□□□ 0.6
TSPAN4-213ENST00000524895 EPHX2P34913 555 aa18.83■□□□□ 0.6
TSPAN4-213ENST00000524895 ANAPC15P60006 121 aa18.83■□□□□ 0.6
TSPAN4-213ENST00000524895 PPARAQ07869 468 aa18.83■□□□□ 0.6
TSPAN4-213ENST00000524895 TCP10Q12799 353 aa18.83■□□□□ 0.6
TSPAN4-213ENST00000524895 SLC4A8Q2Y0W8 1093 aa18.83■□□□□ 0.6
TSPAN4-213ENST00000524895 SBK1Q52WX2 424 aa18.83■□□□□ 0.6
TSPAN4-213ENST00000524895 FKBP1CQ5VVH2 108 aa18.83■□□□□ 0.6
TSPAN4-213ENST00000524895 FAM198AQ9UFP1 575 aa18.83■□□□□ 0.6
TSPAN4-213ENST00000524895 SNX14Q9Y5W7 946 aa18.83■□□□□ 0.6
TSPAN4-213ENST00000524895 CYP2D7A0A087X1C5 515 aa18.82■□□□□ 0.6
TSPAN4-213ENST00000524895 CYP2D6P10635 497 aa18.82■□□□□ 0.6
TSPAN4-213ENST00000524895 TNNI2P48788 182 aa18.82■□□□□ 0.6
TSPAN4-213ENST00000524895 TNFAIP1Q13829 316 aa18.82■□□□□ 0.6
TSPAN4-213ENST00000524895 RASEFQ8IZ41 740 aa18.82■□□□□ 0.6
TSPAN4-213ENST00000524895 KCNB2Q92953 911 aa18.82■□□□□ 0.6
TSPAN4-213ENST00000524895 MYH1P12882 1939 aa18.82■□□□□ 0.6
TSPAN4-213ENST00000524895 ASTN2O75129 1339 aaPredicted RBP18.81■□□□□ 0.6
TSPAN4-213ENST00000524895 SLC3A2P08195 630 aaKnown RBP18.81■□□□□ 0.6
TSPAN4-213ENST00000524895 HIRAP54198 1017 aaPredicted RBP18.81■□□□□ 0.6
TSPAN4-213ENST00000524895 KRT32Q14532 448 aa18.81■□□□□ 0.6
TSPAN4-213ENST00000524895 ANGEL2Q5VTE6 544 aaKnown RBP18.81■□□□□ 0.6
TSPAN4-213ENST00000524895 USP50Q70EL3 339 aaPredicted RBP18.81■□□□□ 0.6
TSPAN4-213ENST00000524895 ZSCAN29Q8IWY8 852 aaPredicted RBP18.81■□□□□ 0.6
TSPAN4-213ENST00000524895 GGA3Q9NZ52 723 aa18.81■□□□□ 0.6
TSPAN4-213ENST00000524895 COL2A1P02458 1487 aaPredicted RBP18.81■□□□□ 0.6
TSPAN4-213ENST00000524895 HLA-DOAP06340 250 aa18.8■□□□□ 0.6
TSPAN4-213ENST00000524895 CTDSPL2Q05D32 466 aa18.8■□□□□ 0.6
TSPAN4-213ENST00000524895 C12orf60Q5U649 245 aa18.8■□□□□ 0.6
TSPAN4-213ENST00000524895 TTC6Q86TZ1 520 aa18.8■□□□□ 0.6
TSPAN4-213ENST00000524895 FAM83AQ86UY5 434 aa18.8■□□□□ 0.6
TSPAN4-213ENST00000524895 APOBEC3FQ8IUX4 373 aaKnown RBP18.8■□□□□ 0.6
TSPAN4-213ENST00000524895 TBC1D10CQ8IV04 446 aa18.8■□□□□ 0.6
TSPAN4-213ENST00000524895 ZFPM1Q8IX07 1006 aa18.8■□□□□ 0.6
TSPAN4-213ENST00000524895 FAM151AQ8WW52 585 aa18.8■□□□□ 0.6
TSPAN4-213ENST00000524895 NBPF3Q9H094 633 aa18.8■□□□□ 0.6
TSPAN4-213ENST00000524895 DHX36Q9H2U1 1008 aaKnown RBP18.8■□□□□ 0.6
TSPAN4-213ENST00000524895 TAF1DQ9H5J8 278 aaPredicted RBP18.8■□□□□ 0.6
TSPAN4-213ENST00000524895 ANAPC4Q9UJX5 808 aa18.8■□□□□ 0.6
TSPAN4-213ENST00000524895 TAF6LQ9Y6J9 622 aa18.8■□□□□ 0.6
TSPAN4-213ENST00000524895 CNTNAP1P78357 1384 aa18.8■□□□□ 0.6
TSPAN4-213ENST00000524895 ROBO3Q96MS0 1386 aa18.8■□□□□ 0.6
TSPAN4-213ENST00000524895 E7EWF7 191 aa18.79■□□□□ 0.6
TSPAN4-213ENST00000524895 TSGA10IPQ3SY00 556 aa18.79■□□□□ 0.6
TSPAN4-213ENST00000524895 RNF41Q9H4P4 317 aaPredicted RBP18.79■□□□□ 0.6
TSPAN4-213ENST00000524895 TSHZ2Q9NRE2 1034 aa18.79■□□□□ 0.6
TSPAN4-213ENST00000524895 ATRNL1Q5VV63 1379 aa18.79■□□□□ 0.6
TSPAN4-213ENST00000524895 PLCD1P51178 756 aa18.78■□□□□ 0.6
TSPAN4-213ENST00000524895 EVX2Q03828 476 aa18.78■□□□□ 0.6
TSPAN4-213ENST00000524895 EAPPQ56P03 285 aaPredicted RBP18.78■□□□□ 0.6
TSPAN4-213ENST00000524895 AKNAD1Q5T1N1 836 aa18.78■□□□□ 0.6
TSPAN4-213ENST00000524895 MFSD6Q6ZSS7 791 aa18.78■□□□□ 0.6
TSPAN4-213ENST00000524895 PNMA8AQ86V59 439 aaPredicted RBP18.78■□□□□ 0.6
TSPAN4-213ENST00000524895 STK11IPQ8N1F8 1099 aa18.78■□□□□ 0.6
TSPAN4-213ENST00000524895 JAKMIP1Q96N16 626 aaKnown RBP18.78■□□□□ 0.6
TSPAN4-213ENST00000524895 PITPNM2Q9BZ72 1349 aa18.77■□□□□ 0.6
TSPAN4-213ENST00000524895 DDTLA6NHG4 134 aaPredicted RBP18.77■□□□□ 0.6
TSPAN4-213ENST00000524895 POTECB2RU33 542 aa18.77■□□□□ 0.6
TSPAN4-213ENST00000524895 PSMA5P28066 241 aa18.77■□□□□ 0.6
TSPAN4-213ENST00000524895 PDE4BQ07343 736 aa18.77■□□□□ 0.6
TSPAN4-213ENST00000524895 TRDNQ13061 729 aa18.77■□□□□ 0.6
TSPAN4-213ENST00000524895 RASA3Q14644 834 aa18.77■□□□□ 0.6
TSPAN4-213ENST00000524895 STOX1Q6ZVD7 989 aa18.77■□□□□ 0.6
TSPAN4-213ENST00000524895 RALYLQ86SE5 291 aaKnown RBP18.77■□□□□ 0.6
TSPAN4-213ENST00000524895 STAG1Q8WVM7 1258 aa18.77■□□□□ 0.6
TSPAN4-213ENST00000524895 IL17RAQ96F46 866 aa18.77■□□□□ 0.6
TSPAN4-213ENST00000524895 CSRNP1Q96S65 589 aa18.77■□□□□ 0.6
TSPAN4-213ENST00000524895 TMEM39BQ9GZU3 492 aa18.77■□□□□ 0.6
TSPAN4-213ENST00000524895 TOMM22Q9NS69 142 aa18.77■□□□□ 0.6
TSPAN4-213ENST00000524895 SMIM22K7EJ46 135 aa18.76■□□□□ 0.59
TSPAN4-213ENST00000524895 PCP11498 1178 aaKnown RBP18.76■□□□□ 0.59
TSPAN4-213ENST00000524895 VEGFAP15692 232 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms