RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 ZHX2Q9Y6X8 837 aa18.37■□□□□ 0.53
CSTF3-204ENST00000524556 ZNF521Q96K83 1311 aa18.37■□□□□ 0.53
CSTF3-204ENST00000524556 ZBTB7BO15156 539 aaPredicted RBP18.36■□□□□ 0.53
CSTF3-204ENST00000524556 ADCY3O60266 1144 aa18.36■□□□□ 0.53
CSTF3-204ENST00000524556 ENTPD3O75355 529 aa18.36■□□□□ 0.53
CSTF3-204ENST00000524556 PTPRAP18433 802 aa18.36■□□□□ 0.53
CSTF3-204ENST00000524556 RGS3P49796 1198 aa18.36■□□□□ 0.53
CSTF3-204ENST00000524556 ATP2B3Q16720 1220 aa18.36■□□□□ 0.53
CSTF3-204ENST00000524556 PHIPQ8WWQ0 1821 aa18.36■□□□□ 0.53
CSTF3-204ENST00000524556 SSH1Q8WYL5 1049 aa18.36■□□□□ 0.53
CSTF3-204ENST00000524556 IDI2Q9BXS1 227 aa18.36■□□□□ 0.53
CSTF3-204ENST00000524556 FBXO3Q9UK99 471 aa18.36■□□□□ 0.53
CSTF3-204ENST00000524556 DENND2AQ9ULE3 1009 aa18.36■□□□□ 0.53
CSTF3-204ENST00000524556 SLC45A1Q9Y2W3 748 aa18.36■□□□□ 0.53
CSTF3-204ENST00000524556 SEMA3EO15041 775 aa18.35■□□□□ 0.53
CSTF3-204ENST00000524556 CIAO1O76071 339 aa18.35■□□□□ 0.53
CSTF3-204ENST00000524556 FLT3LGP49771 235 aa18.35■□□□□ 0.53
CSTF3-204ENST00000524556 MAP3K10Q02779 954 aa18.35■□□□□ 0.53
CSTF3-204ENST00000524556 GADL1Q6ZQY3 521 aa18.35■□□□□ 0.53
CSTF3-204ENST00000524556 CEP126Q9P2H0 1117 aa18.35■□□□□ 0.53
CSTF3-204ENST00000524556 COL6A3P12111 3177 aa18.34■□□□□ 0.53
CSTF3-204ENST00000524556 ZBTB22O15209 634 aa18.34■□□□□ 0.53
CSTF3-204ENST00000524556 CAPN2P17655 700 aa18.34■□□□□ 0.53
CSTF3-204ENST00000524556 PHKA1P46020 1223 aa18.34■□□□□ 0.53
CSTF3-204ENST00000524556 SH3BP5LQ7L8J4 393 aa18.34■□□□□ 0.53
CSTF3-204ENST00000524556 PXYLP1Q8TE99 480 aa18.34■□□□□ 0.53
CSTF3-204ENST00000524556 SIL1Q9H173 461 aa18.34■□□□□ 0.53
CSTF3-204ENST00000524556 LRRFIP2Q9Y608 721 aaKnown RBP18.34■□□□□ 0.53
CSTF3-204ENST00000524556 DOCK1Q14185 1865 aa18.34■□□□□ 0.53
CSTF3-204ENST00000524556 LAMA3Q16787 3333 aa18.34■□□□□ 0.53
CSTF3-204ENST00000524556 GAKO14976 1311 aa18.33■□□□□ 0.53
CSTF3-204ENST00000524556 INHAP05111 366 aa18.33■□□□□ 0.52
CSTF3-204ENST00000524556 ELNP15502 786 aa18.33■□□□□ 0.52
CSTF3-204ENST00000524556 IRF5Q13568 498 aa18.33■□□□□ 0.52
CSTF3-204ENST00000524556 ZSCAN29Q8IWY8 852 aaPredicted RBP18.33■□□□□ 0.52
CSTF3-204ENST00000524556 RFX7Q2KHR2 1363 aa18.32■□□□□ 0.52
CSTF3-204ENST00000524556 DDTLA6NHG4 134 aaPredicted RBP18.32■□□□□ 0.52
CSTF3-204ENST00000524556 TNPO2O14787 897 aaKnown RBP18.32■□□□□ 0.52
CSTF3-204ENST00000524556 CTNND1O60716 968 aaKnown RBP18.32■□□□□ 0.52
CSTF3-204ENST00000524556 TFRCP02786 760 aaKnown RBP18.32■□□□□ 0.52
CSTF3-204ENST00000524556 ZGPATQ8N5A5 531 aaKnown RBP18.32■□□□□ 0.52
CSTF3-204ENST00000524556 A0A1W2PPC1 479 aa18.31■□□□□ 0.52
CSTF3-204ENST00000524556 EVI5O60447 810 aa18.31■□□□□ 0.52
CSTF3-204ENST00000524556 SLURP2P0DP57 97 aa18.31■□□□□ 0.52
CSTF3-204ENST00000524556 IL15P40933 162 aaPredicted RBP18.31■□□□□ 0.52
CSTF3-204ENST00000524556 SMCR8Q8TEV9 937 aaPredicted RBP18.31■□□□□ 0.52
CSTF3-204ENST00000524556 FAM163AQ96GL9 167 aaPredicted RBP18.31■□□□□ 0.52
CSTF3-204ENST00000524556 DEFB118Q96PH6 123 aa18.31■□□□□ 0.52
CSTF3-204ENST00000524556 PAK6Q9NQU5 681 aaPredicted RBP18.31■□□□□ 0.52
CSTF3-204ENST00000524556 ALPK3Q96L96 1907 aa18.3■□□□□ 0.52
CSTF3-204ENST00000524556 TRIM75PA6NK02 468 aa18.3■□□□□ 0.52
CSTF3-204ENST00000524556 UBTFL1P0CB47 393 aaPredicted RBP18.3■□□□□ 0.52
CSTF3-204ENST00000524556 CCDC102BQ68D86 513 aa18.3■□□□□ 0.52
CSTF3-204ENST00000524556 DZIP1Q86YF9 867 aaKnown RBP18.3■□□□□ 0.52
CSTF3-204ENST00000524556 SLF2Q8IX21 1173 aa18.3■□□□□ 0.52
CSTF3-204ENST00000524556 CRISPLD2Q9H0B8 497 aa18.3■□□□□ 0.52
CSTF3-204ENST00000524556 DDX4Q9NQI0 724 aaKnown RBP18.3■□□□□ 0.52
CSTF3-204ENST00000524556 A0A0C4DFX4 3053 aa18.3■□□□□ 0.52
CSTF3-204ENST00000524556 E9PSI1 815 aa18.29■□□□□ 0.52
CSTF3-204ENST00000524556 ADORA1P30542 326 aa18.29■□□□□ 0.52
CSTF3-204ENST00000524556 ALDH1L2Q3SY69 923 aa18.29■□□□□ 0.52
CSTF3-204ENST00000524556 ANKRD13CQ8N6S4 541 aa18.29■□□□□ 0.52
CSTF3-204ENST00000524556 COA7Q96BR5 231 aa18.29■□□□□ 0.52
CSTF3-204ENST00000524556 AGTPBP1Q9UPW5 1226 aa18.29■□□□□ 0.52
CSTF3-204ENST00000524556 TBC1D12O60347 775 aa18.28■□□□□ 0.52
CSTF3-204ENST00000524556 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.28■□□□□ 0.52
CSTF3-204ENST00000524556 ABCF2Q9UG63 623 aa18.28■□□□□ 0.52
CSTF3-204ENST00000524556 PA2G4Q9UQ80 394 aaKnown RBP18.28■□□□□ 0.52
CSTF3-204ENST00000524556 PDS5AQ29RF7 1337 aaKnown RBP18.27■□□□□ 0.52
CSTF3-204ENST00000524556 BTDP43251 543 aa18.27■□□□□ 0.52
CSTF3-204ENST00000524556 PICALMQ13492 652 aa18.27■□□□□ 0.52
CSTF3-204ENST00000524556 RASGRF1Q13972 1273 aa18.27■□□□□ 0.52
CSTF3-204ENST00000524556 TREML2Q5T2D2 321 aa18.27■□□□□ 0.52
CSTF3-204ENST00000524556 SPTY2D1Q68D10 685 aaPredicted RBP18.27■□□□□ 0.52
CSTF3-204ENST00000524556 CCDC84Q86UT8 332 aaPredicted RBP18.27■□□□□ 0.52
CSTF3-204ENST00000524556 PAWRQ96IZ0 340 aaKnown RBP18.27■□□□□ 0.52
CSTF3-204ENST00000524556 COPRSQ9NQ92 184 aa18.27■□□□□ 0.52
CSTF3-204ENST00000524556 STAP2Q9UGK3 403 aa18.27■□□□□ 0.52
CSTF3-204ENST00000524556 PNMA3Q9UL41 463 aa18.27■□□□□ 0.52
CSTF3-204ENST00000524556 TAOK2Q9UL54 1235 aa18.27■□□□□ 0.52
CSTF3-204ENST00000524556 MROH7-TTC4A0A0A0MT08 1334 aa18.26■□□□□ 0.51
CSTF3-204ENST00000524556 GPR75-ASB3A0A0A6YYF3 556 aa18.26■□□□□ 0.51
CSTF3-204ENST00000524556 SOX1O00570 391 aaPredicted RBP18.26■□□□□ 0.51
CSTF3-204ENST00000524556 NPM3O75607 178 aaKnown RBP18.26■□□□□ 0.51
CSTF3-204ENST00000524556 TIMM10P62072 90 aa18.26■□□□□ 0.51
CSTF3-204ENST00000524556 SLFN5Q08AF3 891 aa18.26■□□□□ 0.51
CSTF3-204ENST00000524556 FAM110CQ1W6H9 321 aa18.26■□□□□ 0.51
CSTF3-204ENST00000524556 PROCA1Q8NCQ7 364 aaPredicted RBP18.26■□□□□ 0.51
CSTF3-204ENST00000524556 HDAC5Q9UQL6 1122 aa18.26■□□□□ 0.51
CSTF3-204ENST00000524556 ATAD5Q96QE3 1844 aa18.26■□□□□ 0.51
CSTF3-204ENST00000524556 LOC285556D6RIA3 1793 aa18.25■□□□□ 0.51
CSTF3-204ENST00000524556 RHBDL3P58872 404 aa18.25■□□□□ 0.51
CSTF3-204ENST00000524556 NECAB2Q7Z6G3 386 aa18.25■□□□□ 0.51
CSTF3-204ENST00000524556 SLC17A8Q8NDX2 589 aa18.25■□□□□ 0.51
CSTF3-204ENST00000524556 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.25■□□□□ 0.51
CSTF3-204ENST00000524556 SMC4Q9NTJ3 1288 aa18.25■□□□□ 0.51
CSTF3-204ENST00000524556 GCLCP48506 637 aaPredicted RBP18.24■□□□□ 0.51
CSTF3-204ENST00000524556 MECOMQ03112 1051 aa18.24■□□□□ 0.51
CSTF3-204ENST00000524556 SPP2Q13103 211 aa18.24■□□□□ 0.51
CSTF3-204ENST00000524556 ERICH6Q7L0X2 663 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms