RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 KIF2AO00139 706 aaPredicted RBP14.89□□□□□ -0.03
PCDHGB1-201ENST00000523390 YEATS4O95619 227 aa14.89□□□□□ -0.03
PCDHGB1-201ENST00000523390 NRXN1Q9ULB1 1477 aa14.89□□□□□ -0.03
PCDHGB1-201ENST00000523390 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.89□□□□□ -0.03
PCDHGB1-201ENST00000523390 UBE4AQ14139 1066 aa14.89□□□□□ -0.03
PCDHGB1-201ENST00000523390 ERMNQ8TAM6 284 aa14.89□□□□□ -0.03
PCDHGB1-201ENST00000523390 CNKSR2Q8WXI2 1034 aa14.89□□□□□ -0.03
PCDHGB1-201ENST00000523390 ERVV-1B6SEH8 477 aa14.88□□□□□ -0.03
PCDHGB1-201ENST00000523390 SNAP23O00161 211 aa14.88□□□□□ -0.03
PCDHGB1-201ENST00000523390 DNA2P51530 1060 aa14.88□□□□□ -0.03
PCDHGB1-201ENST00000523390 ZNF654Q8IZM8 581 aa14.88□□□□□ -0.03
PCDHGB1-201ENST00000523390 TTF2Q9UNY4 1162 aaKnown RBP14.88□□□□□ -0.03
PCDHGB1-201ENST00000523390 GJA3Q9Y6H8 435 aa14.88□□□□□ -0.03
PCDHGB1-201ENST00000523390 ZNF804BA4D1E1 1349 aa14.88□□□□□ -0.03
PCDHGB1-201ENST00000523390 KIF5CO60282 957 aa14.88□□□□□ -0.03
PCDHGB1-201ENST00000523390 TBCAO75347 108 aaKnown RBP14.88□□□□□ -0.03
PCDHGB1-201ENST00000523390 TRAF1Q13077 416 aa14.88□□□□□ -0.03
PCDHGB1-201ENST00000523390 UBE3CQ15386 1083 aa14.88□□□□□ -0.03
PCDHGB1-201ENST00000523390 KRT79Q5XKE5 535 aa14.88□□□□□ -0.03
PCDHGB1-201ENST00000523390 TBC1D22AQ8WUA7 517 aa14.88□□□□□ -0.03
PCDHGB1-201ENST00000523390 ERCC4Q92889 916 aaPredicted RBP14.88□□□□□ -0.03
PCDHGB1-201ENST00000523390 PREX1Q8TCU6 1659 aa14.88□□□□□ -0.03
PCDHGB1-201ENST00000523390 FSD2A1L4K1 749 aa14.88□□□□□ -0.03
PCDHGB1-201ENST00000523390 TNNT3P45378 269 aaPredicted RBP14.88□□□□□ -0.03
PCDHGB1-201ENST00000523390 MTMR6Q9Y217 621 aa14.88□□□□□ -0.03
PCDHGB1-201ENST00000523390 DOK7Q18PE1 504 aa14.87□□□□□ -0.03
PCDHGB1-201ENST00000523390 VPS54Q9P1Q0 977 aa14.87□□□□□ -0.03
PCDHGB1-201ENST00000523390 PSMA7O14818 248 aa14.87□□□□□ -0.03
PCDHGB1-201ENST00000523390 IQUBQ8NA54 791 aa14.87□□□□□ -0.03
PCDHGB1-201ENST00000523390 OSBP2Q969R2 916 aa14.87□□□□□ -0.03
PCDHGB1-201ENST00000523390 SCLT1Q96NL6 688 aa14.87□□□□□ -0.03
PCDHGB1-201ENST00000523390 TMEM63CQ9P1W3 806 aa14.87□□□□□ -0.03
PCDHGB1-201ENST00000523390 IQGAP1P46940 1657 aa14.87□□□□□ -0.03
PCDHGB1-201ENST00000523390 CRB1P82279 1406 aa14.87□□□□□ -0.03
PCDHGB1-201ENST00000523390 NBPF26B4DH59 902 aa14.87□□□□□ -0.03
PCDHGB1-201ENST00000523390 NBPF10Q6P3W6 841 aaKnown RBP14.87□□□□□ -0.03
PCDHGB1-201ENST00000523390 NBPF15Q8N660 670 aa14.87□□□□□ -0.03
PCDHGB1-201ENST00000523390 ZNF274Q96GC6 653 aaPredicted RBP14.87□□□□□ -0.03
PCDHGB1-201ENST00000523390 SKILP12757 684 aa14.87□□□□□ -0.03
PCDHGB1-201ENST00000523390 ALDH1B1P30837 517 aa14.87□□□□□ -0.03
PCDHGB1-201ENST00000523390 MTX1Q13505 466 aa14.87□□□□□ -0.03
PCDHGB1-201ENST00000523390 ZYXQ15942 572 aaKnown RBP14.87□□□□□ -0.03
PCDHGB1-201ENST00000523390 SEPT12Q8IYM1 358 aa14.87□□□□□ -0.03
PCDHGB1-201ENST00000523390 SYCP3Q8IZU3 236 aa14.87□□□□□ -0.03
PCDHGB1-201ENST00000523390 ELP1O95163 1332 aa14.86□□□□□ -0.03
PCDHGB1-201ENST00000523390 RGS12O14924 1447 aa14.86□□□□□ -0.03
PCDHGB1-201ENST00000523390 JAKMIP3Q5VZ66 844 aa14.86□□□□□ -0.03
PCDHGB1-201ENST00000523390 ADCY9O60503 1353 aa14.86□□□□□ -0.03
PCDHGB1-201ENST00000523390 ZC3H13Q5T200 1668 aaKnown RBP14.86□□□□□ -0.03
PCDHGB1-201ENST00000523390 M0R2C6 588 aa14.86□□□□□ -0.03
PCDHGB1-201ENST00000523390 LRRC27Q9C0I9 530 aa14.86□□□□□ -0.03
PCDHGB1-201ENST00000523390 PFKFB2O60825 505 aa14.86□□□□□ -0.03
PCDHGB1-201ENST00000523390 SLFNL1Q499Z3 407 aa14.86□□□□□ -0.03
PCDHGB1-201ENST00000523390 KCNH3Q9ULD8 1083 aa14.86□□□□□ -0.03
PCDHGB1-201ENST00000523390 TNKSO95271 1327 aa14.86□□□□□ -0.03
PCDHGB1-201ENST00000523390 SCNN1DP51172 638 aa14.85□□□□□ -0.03
PCDHGB1-201ENST00000523390 NRKQ7Z2Y5 1582 aa14.85□□□□□ -0.03
PCDHGB1-201ENST00000523390 SERPINB2P05120 415 aa14.85□□□□□ -0.03
PCDHGB1-201ENST00000523390 KIAA0825Q8IV33 1275 aa14.85□□□□□ -0.03
PCDHGB1-201ENST00000523390 FAM114A1Q8IWE2 563 aa14.85□□□□□ -0.03
PCDHGB1-201ENST00000523390 TAF4BQ92750 862 aa14.85□□□□□ -0.03
PCDHGB1-201ENST00000523390 IFNKQ9P0W0 207 aa14.85□□□□□ -0.03
PCDHGB1-201ENST00000523390 FRMPD1Q5SYB0 1578 aa14.85□□□□□ -0.03
PCDHGB1-201ENST00000523390 PPIP5K2O43314 1243 aa14.85□□□□□ -0.03
PCDHGB1-201ENST00000523390 TRIM21P19474 475 aaKnown RBP14.85□□□□□ -0.03
PCDHGB1-201ENST00000523390 ATP2B4P23634 1241 aa14.85□□□□□ -0.03
PCDHGB1-201ENST00000523390 CCDC150Q8NCX0 1101 aa14.85□□□□□ -0.03
PCDHGB1-201ENST00000523390 PUS7LQ9H0K6 701 aaKnown RBP14.85□□□□□ -0.03
PCDHGB1-201ENST00000523390 USP40Q9NVE5 1235 aa14.85□□□□□ -0.03
PCDHGB1-201ENST00000523390 THRAP3Q9Y2W1 955 aaKnown RBP14.85□□□□□ -0.03
PCDHGB1-201ENST00000523390 PPP4R3AQ6IN85 833 aa14.85□□□□□ -0.03
PCDHGB1-201ENST00000523390 FCHSD1Q86WN1 690 aa14.85□□□□□ -0.03
PCDHGB1-201ENST00000523390 ARPP21Q9UBL0 812 aaPredicted RBP14.85□□□□□ -0.03
PCDHGB1-201ENST00000523390 KIAA1210Q9ULL0 1709 aa14.85□□□□□ -0.03
PCDHGB1-201ENST00000523390 KCNQ2O43526 872 aa14.84□□□□□ -0.03
PCDHGB1-201ENST00000523390 MRPL12P52815 198 aaKnown RBP14.84□□□□□ -0.03
PCDHGB1-201ENST00000523390 MYSM1Q5VVJ2 828 aa14.84□□□□□ -0.03
PCDHGB1-201ENST00000523390 USP28Q96RU2 1077 aa14.84□□□□□ -0.03
PCDHGB1-201ENST00000523390 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.84□□□□□ -0.03
PCDHGB1-201ENST00000523390 POLR2DO15514 142 aaKnown RBP14.84□□□□□ -0.03
PCDHGB1-201ENST00000523390 PDE6BP35913 854 aa14.84□□□□□ -0.03
PCDHGB1-201ENST00000523390 SPAG1Q07617 926 aa14.84□□□□□ -0.03
PCDHGB1-201ENST00000523390 SNW1Q13573 536 aaKnown RBP14.84□□□□□ -0.03
PCDHGB1-201ENST00000523390 TTC38Q5R3I4 469 aa14.84□□□□□ -0.03
PCDHGB1-201ENST00000523390 KRT27Q7Z3Y8 459 aa14.84□□□□□ -0.03
PCDHGB1-201ENST00000523390 NLGN1Q8N2Q7 840 aa14.84□□□□□ -0.03
PCDHGB1-201ENST00000523390 CLSTN2Q9H4D0 955 aa14.84□□□□□ -0.03
PCDHGB1-201ENST00000523390 MMRN2Q9H8L6 949 aa14.84□□□□□ -0.03
PCDHGB1-201ENST00000523390 POLR1AO95602 1720 aaPredicted RBP14.84□□□□□ -0.03
PCDHGB1-201ENST00000523390 PRKAB2O43741 272 aa14.84□□□□□ -0.03
PCDHGB1-201ENST00000523390 PTGS1P23219 599 aa14.84□□□□□ -0.03
PCDHGB1-201ENST00000523390 PDIA3P30101 505 aaKnown RBP14.84□□□□□ -0.03
PCDHGB1-201ENST00000523390 PLS1Q14651 629 aa14.84□□□□□ -0.03
PCDHGB1-201ENST00000523390 ZKSCAN5Q9Y2L8 839 aa14.84□□□□□ -0.03
PCDHGB1-201ENST00000523390 DIP2AQ14689 1571 aa14.84□□□□□ -0.03
PCDHGB1-201ENST00000523390 USP8P40818 1118 aa14.83□□□□□ -0.03
PCDHGB1-201ENST00000523390 BAG6P46379 1132 aa14.83□□□□□ -0.03
PCDHGB1-201ENST00000523390 AXDND1Q5T1B0 1012 aaPredicted RBP14.83□□□□□ -0.03
PCDHGB1-201ENST00000523390 VPS36Q86VN1 386 aa14.83□□□□□ -0.03
PCDHGB1-201ENST00000523390 ADD2P35612 726 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms