RNA–Protein interactions for RNA: ENST00000523263.1

VIRMA-208, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 3

Gene VIRMA, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-208ENST00000523263 LRCH3Q96II8 777 aa11.86□□□□□ -0.51
VIRMA-208ENST00000523263 DEFB118Q96PH6 123 aa11.86□□□□□ -0.51
VIRMA-208ENST00000523263 ZHX2Q9Y6X8 837 aa11.86□□□□□ -0.51
VIRMA-208ENST00000523263 CEP290O15078 2479 aa11.86□□□□□ -0.51
VIRMA-208ENST00000523263 CTNND1O60716 968 aaKnown RBP11.85□□□□□ -0.51
VIRMA-208ENST00000523263 SLC5A1P13866 664 aa11.85□□□□□ -0.51
VIRMA-208ENST00000523263 ELNP15502 786 aa11.85□□□□□ -0.51
VIRMA-208ENST00000523263 COA7Q96BR5 231 aa11.85□□□□□ -0.51
VIRMA-208ENST00000523263 PAWRQ96IZ0 340 aaKnown RBP11.85□□□□□ -0.51
VIRMA-208ENST00000523263 PICK1Q9NRD5 415 aa11.85□□□□□ -0.51
VIRMA-208ENST00000523263 USP40Q9NVE5 1235 aa11.85□□□□□ -0.51
VIRMA-208ENST00000523263 FBXO3Q9UK99 471 aa11.85□□□□□ -0.51
VIRMA-208ENST00000523263 STXBP5LQ9Y2K9 1186 aa11.85□□□□□ -0.51
VIRMA-208ENST00000523263 SZT2Q5T011 3432 aa11.84□□□□□ -0.51
VIRMA-208ENST00000523263 EYA2O00167 538 aa11.84□□□□□ -0.51
VIRMA-208ENST00000523263 SEMA3EO15041 775 aa11.84□□□□□ -0.51
VIRMA-208ENST00000523263 DIXDC1Q155Q3 683 aa11.84□□□□□ -0.51
VIRMA-208ENST00000523263 FAM110CQ1W6H9 321 aa11.84□□□□□ -0.51
VIRMA-208ENST00000523263 CCDC184Q52MB2 194 aa11.84□□□□□ -0.51
VIRMA-208ENST00000523263 FAM163AQ96GL9 167 aaPredicted RBP11.84□□□□□ -0.51
VIRMA-208ENST00000523263 AGTPBP1Q9UPW5 1226 aa11.84□□□□□ -0.51
VIRMA-208ENST00000523263 TBC1D12O60347 775 aa11.83□□□□□ -0.52
VIRMA-208ENST00000523263 LDHBP07195 334 aaKnown RBP11.83□□□□□ -0.52
VIRMA-208ENST00000523263 PRDX5P30044 214 aa11.83□□□□□ -0.52
VIRMA-208ENST00000523263 ZEB1P37275 1124 aaPredicted RBP11.83□□□□□ -0.52
VIRMA-208ENST00000523263 RFX5P48382 616 aaPredicted RBP11.83□□□□□ -0.52
VIRMA-208ENST00000523263 ZFPM1Q8IX07 1006 aa11.83□□□□□ -0.52
VIRMA-208ENST00000523263 SMCR8Q8TEV9 937 aaPredicted RBP11.83□□□□□ -0.52
VIRMA-208ENST00000523263 TBC1D2Q9BYX2 928 aa11.83□□□□□ -0.52
VIRMA-208ENST00000523263 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.83□□□□□ -0.52
VIRMA-208ENST00000523263 SPINK5Q9NQ38 1064 aaPredicted RBP11.83□□□□□ -0.52
VIRMA-208ENST00000523263 GNL3LQ9NVN8 582 aaKnown RBP11.83□□□□□ -0.52
VIRMA-208ENST00000523263 PNMA3Q9UL41 463 aa11.83□□□□□ -0.52
VIRMA-208ENST00000523263 GAKO14976 1311 aa11.83□□□□□ -0.52
VIRMA-208ENST00000523263 RPTORQ8N122 1335 aa11.83□□□□□ -0.52
VIRMA-208ENST00000523263 NPM3O75607 178 aaKnown RBP11.82□□□□□ -0.52
VIRMA-208ENST00000523263 HMGCRP04035 888 aa11.82□□□□□ -0.52
VIRMA-208ENST00000523263 GCLCP48506 637 aaPredicted RBP11.82□□□□□ -0.52
VIRMA-208ENST00000523263 RGS3P49796 1198 aa11.82□□□□□ -0.52
VIRMA-208ENST00000523263 GADL1Q6ZQY3 521 aa11.82□□□□□ -0.52
VIRMA-208ENST00000523263 ZGPATQ8N5A5 531 aaKnown RBP11.82□□□□□ -0.52
VIRMA-208ENST00000523263 PROCA1Q8NCQ7 364 aaPredicted RBP11.82□□□□□ -0.52
VIRMA-208ENST00000523263 KLHDC4Q8TBB5 520 aa11.82□□□□□ -0.52
VIRMA-208ENST00000523263 NBPF3Q9H094 633 aa11.82□□□□□ -0.52
VIRMA-208ENST00000523263 USP44Q9H0E7 712 aa11.82□□□□□ -0.52
VIRMA-208ENST00000523263 GJD2Q9UKL4 321 aa11.82□□□□□ -0.52
VIRMA-208ENST00000523263 DENND2AQ9ULE3 1009 aa11.82□□□□□ -0.52
VIRMA-208ENST00000523263 LRRFIP2Q9Y608 721 aaKnown RBP11.82□□□□□ -0.52
VIRMA-208ENST00000523263 RFX7Q2KHR2 1363 aa11.81□□□□□ -0.52
VIRMA-208ENST00000523263 SH3BP5LQ7L8J4 393 aa11.81□□□□□ -0.52
VIRMA-208ENST00000523263 ATG9AQ7Z3C6 839 aa11.81□□□□□ -0.52
VIRMA-208ENST00000523263 SLF2Q8IX21 1173 aa11.81□□□□□ -0.52
VIRMA-208ENST00000523263 TDHQ8IZJ6 230 aa11.81□□□□□ -0.52
VIRMA-208ENST00000523263 DEFB123Q8N688 67 aa11.81□□□□□ -0.52
VIRMA-208ENST00000523263 HMX1Q9NP08 348 aaPredicted RBP11.81□□□□□ -0.52
VIRMA-208ENST00000523263 MTMR10Q9NXD2 777 aa11.81□□□□□ -0.52
VIRMA-208ENST00000523263 OGDHLQ9ULD0 1010 aa11.81□□□□□ -0.52
VIRMA-208ENST00000523263 PTPRCP08575 1304 aa11.81□□□□□ -0.52
VIRMA-208ENST00000523263 RANBP2P49792 3224 aaKnown RBP11.81□□□□□ -0.52
VIRMA-208ENST00000523263 CIAO1O76071 339 aa11.8□□□□□ -0.52
VIRMA-208ENST00000523263 MAP4K4O95819 1239 aaPredicted RBP11.8□□□□□ -0.52
VIRMA-208ENST00000523263 PABPC4Q13310 644 aaKnown RBP eCLIP11.8□□□□□ -0.52
VIRMA-208ENST00000523263 ANKRD13CQ8N6S4 541 aa11.8□□□□□ -0.52
VIRMA-208ENST00000523263 DIS3LQ8TF46 1054 aaKnown RBP11.8□□□□□ -0.52
VIRMA-208ENST00000523263 OSBPL5Q9H0X9 879 aaPredicted RBP11.8□□□□□ -0.52
VIRMA-208ENST00000523263 PDS5AQ29RF7 1337 aaKnown RBP11.8□□□□□ -0.52
VIRMA-208ENST00000523263 DDTLA6NHG4 134 aaPredicted RBP11.79□□□□□ -0.52
VIRMA-208ENST00000523263 TRIM75PA6NK02 468 aa11.79□□□□□ -0.52
VIRMA-208ENST00000523263 SH3D19Q5HYK7 790 aa11.79□□□□□ -0.52
VIRMA-208ENST00000523263 MAP3K21Q5TCX8 1036 aa11.79□□□□□ -0.52
VIRMA-208ENST00000523263 FAM109BQ6ICB4 259 aaPredicted RBP11.79□□□□□ -0.52
VIRMA-208ENST00000523263 C7orf61Q8IZ16 206 aa11.79□□□□□ -0.52
VIRMA-208ENST00000523263 MRPL50Q8N5N7 158 aaKnown RBP11.79□□□□□ -0.52
VIRMA-208ENST00000523263 C11orf49Q9H6J7 331 aa11.79□□□□□ -0.52
VIRMA-208ENST00000523263 CEP126Q9P2H0 1117 aa11.79□□□□□ -0.52
VIRMA-208ENST00000523263 XRCC5P13010 732 aaKnown RBP11.78□□□□□ -0.52
VIRMA-208ENST00000523263 MAGEA10P43363 369 aaPredicted RBP11.78□□□□□ -0.52
VIRMA-208ENST00000523263 ATP2B3Q16720 1220 aa11.78□□□□□ -0.52
VIRMA-208ENST00000523263 TREML2Q5T2D2 321 aa11.78□□□□□ -0.52
VIRMA-208ENST00000523263 ZSCAN29Q8IWY8 852 aaPredicted RBP11.78□□□□□ -0.52
VIRMA-208ENST00000523263 MORF4L1Q9UBU8 362 aa11.78□□□□□ -0.52
VIRMA-208ENST00000523263 ZMYND8Q9ULU4 1186 aaPredicted RBP11.78□□□□□ -0.52
VIRMA-208ENST00000523263 GPR75-ASB3A0A0A6YYF3 556 aa11.77□□□□□ -0.53
VIRMA-208ENST00000523263 COL6A1P12109 1028 aa11.77□□□□□ -0.53
VIRMA-208ENST00000523263 IL15P40933 162 aaPredicted RBP11.77□□□□□ -0.53
VIRMA-208ENST00000523263 SPTY2D1Q68D10 685 aaPredicted RBP11.77□□□□□ -0.53
VIRMA-208ENST00000523263 TRMT44Q8IYL2 757 aaKnown RBP11.77□□□□□ -0.53
VIRMA-208ENST00000523263 ZNF280CQ8ND82 737 aa11.77□□□□□ -0.53
VIRMA-208ENST00000523263 DDX4Q9NQI0 724 aaKnown RBP11.77□□□□□ -0.53
VIRMA-208ENST00000523263 TAOK2Q9UL54 1235 aa11.77□□□□□ -0.53
VIRMA-208ENST00000523263 SALL2Q9Y467 1007 aaPredicted RBP11.77□□□□□ -0.53
VIRMA-208ENST00000523263 POTEB2H3BUK9 544 aa11.76□□□□□ -0.53
VIRMA-208ENST00000523263 PHKA1P46020 1223 aa11.76□□□□□ -0.53
VIRMA-208ENST00000523263 RHBDL3P58872 404 aa11.76□□□□□ -0.53
VIRMA-208ENST00000523263 SPP2Q13103 211 aa11.76□□□□□ -0.53
VIRMA-208ENST00000523263 Q7L0L9 218 aa11.76□□□□□ -0.53
VIRMA-208ENST00000523263 UBE2OQ9C0C9 1292 aaKnown RBP11.76□□□□□ -0.53
VIRMA-208ENST00000523263 ASCC2Q9H1I8 757 aaPredicted RBP11.76□□□□□ -0.53
VIRMA-208ENST00000523263 MRS2Q9HD23 443 aa11.76□□□□□ -0.53
VIRMA-208ENST00000523263 MGAMO43451 1857 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms