RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 PSMD1Q99460 953 aa18.23■□□□□ 0.51
CTNNA1-236ENST00000522792 AGXT2Q9BYV1 514 aa18.23■□□□□ 0.51
CTNNA1-236ENST00000522792 DAGLAQ9Y4D2 1042 aa18.23■□□□□ 0.51
CTNNA1-236ENST00000522792 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.23■□□□□ 0.51
CTNNA1-236ENST00000522792 KDM4AO75164 1064 aa18.23■□□□□ 0.51
CTNNA1-236ENST00000522792 NFKBIBQ15653 356 aa18.23■□□□□ 0.51
CTNNA1-236ENST00000522792 STRIP1Q5VSL9 837 aa18.23■□□□□ 0.51
CTNNA1-236ENST00000522792 MCM9Q9NXL9 1143 aa18.23■□□□□ 0.51
CTNNA1-236ENST00000522792 ANAPC4Q9UJX5 808 aa18.23■□□□□ 0.51
CTNNA1-236ENST00000522792 ADAMTSL1Q8N6G6 1762 aa18.23■□□□□ 0.51
CTNNA1-236ENST00000522792 USP17L3A6NCW0 530 aa18.22■□□□□ 0.51
CTNNA1-236ENST00000522792 USP17L4A6NCW7 530 aa18.22■□□□□ 0.51
CTNNA1-236ENST00000522792 YDJCA8MPS7 323 aa18.22■□□□□ 0.51
CTNNA1-236ENST00000522792 USP17L8P0C7I0 530 aa18.22■□□□□ 0.51
CTNNA1-236ENST00000522792 RAB3GAP1Q15042 981 aa18.22■□□□□ 0.51
CTNNA1-236ENST00000522792 DACT2Q5SW24 774 aa18.22■□□□□ 0.51
CTNNA1-236ENST00000522792 USP17L1Q7RTZ2 530 aa18.22■□□□□ 0.51
CTNNA1-236ENST00000522792 MAPKAPK5Q8IW41 473 aa18.22■□□□□ 0.51
CTNNA1-236ENST00000522792 FAM163AQ96GL9 167 aaPredicted RBP18.22■□□□□ 0.51
CTNNA1-236ENST00000522792 CNNM2Q9H8M5 875 aa18.22■□□□□ 0.51
CTNNA1-236ENST00000522792 SMC3Q9UQE7 1217 aa18.22■□□□□ 0.51
CTNNA1-236ENST00000522792 CD2APQ9Y5K6 639 aa18.22■□□□□ 0.51
CTNNA1-236ENST00000522792 LAMB1P07942 1786 aa18.22■□□□□ 0.51
CTNNA1-236ENST00000522792 ZNF646O15015 1829 aaPredicted RBP18.22■□□□□ 0.51
CTNNA1-236ENST00000522792 KIAA0825Q8IV33 1275 aa18.22■□□□□ 0.51
CTNNA1-236ENST00000522792 TEX11Q8IYF3 940 aa18.22■□□□□ 0.51
CTNNA1-236ENST00000522792 LARGE2Q8N3Y3 721 aa18.22■□□□□ 0.51
CTNNA1-236ENST00000522792 KRT23Q9C075 422 aa18.22■□□□□ 0.51
CTNNA1-236ENST00000522792 RNF41Q9H4P4 317 aaPredicted RBP18.22■□□□□ 0.51
CTNNA1-236ENST00000522792 ZSWIM5Q9P217 1185 aa18.22■□□□□ 0.51
CTNNA1-236ENST00000522792 ARPP21Q9UBL0 812 aaPredicted RBP18.22■□□□□ 0.51
CTNNA1-236ENST00000522792 BRCA1P38398 1863 aaKnown RBP18.21■□□□□ 0.51
CTNNA1-236ENST00000522792 WDR19Q8NEZ3 1342 aa18.21■□□□□ 0.51
CTNNA1-236ENST00000522792 SOGA3Q5TF21 947 aa18.21■□□□□ 0.51
CTNNA1-236ENST00000522792 TNPO1Q92973 898 aaKnown RBP18.21■□□□□ 0.51
CTNNA1-236ENST00000522792 GTF3C6Q969F1 213 aa18.21■□□□□ 0.51
CTNNA1-236ENST00000522792 COL4A5P29400 1685 aa18.21■□□□□ 0.51
CTNNA1-236ENST00000522792 NAV1Q8NEY1 1877 aa18.2■□□□□ 0.5
CTNNA1-236ENST00000522792 RHBDL3P58872 404 aa18.2■□□□□ 0.5
CTNNA1-236ENST00000522792 MKRN1Q9UHC7 482 aaKnown RBP18.2■□□□□ 0.5
CTNNA1-236ENST00000522792 SAP30BPQ9UHR5 308 aaKnown RBP18.2■□□□□ 0.5
CTNNA1-236ENST00000522792 BCS1LQ9Y276 419 aa18.2■□□□□ 0.5
CTNNA1-236ENST00000522792 PRDM1O75626 825 aa18.2■□□□□ 0.5
CTNNA1-236ENST00000522792 NUCB2P80303 420 aa18.2■□□□□ 0.5
CTNNA1-236ENST00000522792 SCRN1Q12765 414 aa18.2■□□□□ 0.5
CTNNA1-236ENST00000522792 CERS3Q8IU89 383 aa18.2■□□□□ 0.5
CTNNA1-236ENST00000522792 ZKSCAN3Q9BRR0 538 aa18.2■□□□□ 0.5
CTNNA1-236ENST00000522792 BRPF3Q9ULD4 1205 aa18.2■□□□□ 0.5
CTNNA1-236ENST00000522792 CDK5RAP2Q96SN8 1893 aa18.19■□□□□ 0.5
CTNNA1-236ENST00000522792 KLF18A0A0U1RQI7 1052 aa18.19■□□□□ 0.5
CTNNA1-236ENST00000522792 SH2B2O14492 632 aaPredicted RBP18.19■□□□□ 0.5
CTNNA1-236ENST00000522792 PLCG2P16885 1265 aa18.19■□□□□ 0.5
CTNNA1-236ENST00000522792 GJB2P29033 226 aa18.19■□□□□ 0.5
CTNNA1-236ENST00000522792 CCT2P78371 535 aaKnown RBP18.19■□□□□ 0.5
CTNNA1-236ENST00000522792 SBK1Q52WX2 424 aa18.19■□□□□ 0.5
CTNNA1-236ENST00000522792 FOXD4L5Q5VV16 416 aaPredicted RBP18.19■□□□□ 0.5
CTNNA1-236ENST00000522792 RAB11FIP4Q86YS3 637 aa18.19■□□□□ 0.5
CTNNA1-236ENST00000522792 FBXL16Q8N461 479 aa18.19■□□□□ 0.5
CTNNA1-236ENST00000522792 NLGN2Q8NFZ4 835 aa18.19■□□□□ 0.5
CTNNA1-236ENST00000522792 FOXD4L4Q8WXT5 416 aaPredicted RBP18.19■□□□□ 0.5
CTNNA1-236ENST00000522792 PFKFB2O60825 505 aa18.18■□□□□ 0.5
CTNNA1-236ENST00000522792 PDIA3P30101 505 aaKnown RBP18.18■□□□□ 0.5
CTNNA1-236ENST00000522792 FKBP1AP62942 108 aaKnown RBP18.18■□□□□ 0.5
CTNNA1-236ENST00000522792 TEKT1Q969V4 418 aa18.18■□□□□ 0.5
CTNNA1-236ENST00000522792 SENP2Q9HC62 589 aa18.18■□□□□ 0.5
CTNNA1-236ENST00000522792 ANGEL1Q9UNK9 670 aaKnown RBP18.18■□□□□ 0.5
CTNNA1-236ENST00000522792 CRKP46108 304 aa18.18■□□□□ 0.5
CTNNA1-236ENST00000522792 TMEM67Q5HYA8 995 aa18.18■□□□□ 0.5
CTNNA1-236ENST00000522792 TMEM87BQ96K49 555 aa18.18■□□□□ 0.5
CTNNA1-236ENST00000522792 NCOA5Q9HCD5 579 aaKnown RBP18.18■□□□□ 0.5
CTNNA1-236ENST00000522792 ZDHHC9Q9Y397 364 aa18.18■□□□□ 0.5
CTNNA1-236ENST00000522792 PCDHAC2Q9Y5I4 1007 aa18.18■□□□□ 0.5
CTNNA1-236ENST00000522792 FLT1P17948 1338 aa18.18■□□□□ 0.5
CTNNA1-236ENST00000522792 GOLGA8BA8MQT2 603 aa18.17■□□□□ 0.5
CTNNA1-236ENST00000522792 IFIT3O14879 490 aaKnown RBP18.17■□□□□ 0.5
CTNNA1-236ENST00000522792 RAD17O75943 681 aa18.17■□□□□ 0.5
CTNNA1-236ENST00000522792 IARSP41252 1262 aaKnown RBP18.17■□□□□ 0.5
CTNNA1-236ENST00000522792 C12orf60Q5U649 245 aa18.17■□□□□ 0.5
CTNNA1-236ENST00000522792 IGDCC4Q8TDY8 1250 aa18.17■□□□□ 0.5
CTNNA1-236ENST00000522792 ESR2Q92731 530 aa18.17■□□□□ 0.5
CTNNA1-236ENST00000522792 ZNF274Q96GC6 653 aaPredicted RBP18.17■□□□□ 0.5
CTNNA1-236ENST00000522792 PICALMQ13492 652 aa18.16■□□□□ 0.5
CTNNA1-236ENST00000522792 HHIPL2Q6UWX4 724 aa18.16■□□□□ 0.5
CTNNA1-236ENST00000522792 TAOK3Q9H2K8 898 aa18.16■□□□□ 0.5
CTNNA1-236ENST00000522792 LY9Q9HBG7 655 aa18.16■□□□□ 0.5
CTNNA1-236ENST00000522792 RANBP6O60518 1105 aaKnown RBP18.16■□□□□ 0.5
CTNNA1-236ENST00000522792 JAK2O60674 1132 aa18.16■□□□□ 0.5
CTNNA1-236ENST00000522792 POLR3DP05423 398 aaPredicted RBP18.16■□□□□ 0.5
CTNNA1-236ENST00000522792 SLC3A2P08195 630 aaKnown RBP18.16■□□□□ 0.5
CTNNA1-236ENST00000522792 RBM5P52756 815 aaKnown RBP eCLIP18.16■□□□□ 0.5
CTNNA1-236ENST00000522792 EVCP57679 992 aa18.16■□□□□ 0.5
CTNNA1-236ENST00000522792 NFXL1Q6ZNB6 911 aa18.16■□□□□ 0.5
CTNNA1-236ENST00000522792 AMOTL1Q8IY63 956 aa18.16■□□□□ 0.5
CTNNA1-236ENST00000522792 NIM1KQ8IY84 436 aa18.16■□□□□ 0.5
CTNNA1-236ENST00000522792 DYNLL2Q96FJ2 89 aa18.16■□□□□ 0.5
CTNNA1-236ENST00000522792 USP40Q9NVE5 1235 aa18.16■□□□□ 0.5
CTNNA1-236ENST00000522792 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.16■□□□□ 0.5
CTNNA1-236ENST00000522792 APOBEC3HQ6NTF7 200 aaKnown RBP18.15■□□□□ 0.5
CTNNA1-236ENST00000522792 SPON1Q9HCB6 807 aa18.15■□□□□ 0.5
CTNNA1-236ENST00000522792 DDX60LQ5H9U9 1706 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms