RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 ENTPD3O75355 529 aa30.63■■■□□ 2.49
NKX2-1-204ENST00000522719 VEGFAP15692 232 aaPredicted RBP30.63■■■□□ 2.49
NKX2-1-204ENST00000522719 TDO2P48775 406 aa30.63■■■□□ 2.49
NKX2-1-204ENST00000522719 MAPKAPK5Q8IW41 473 aa30.63■■■□□ 2.49
NKX2-1-204ENST00000522719 UPF2Q9HAU5 1272 aaKnown RBP30.63■■■□□ 2.49
NKX2-1-204ENST00000522719 CACNB3P54284 484 aa30.62■■■□□ 2.49
NKX2-1-204ENST00000522719 NFIAQ12857 509 aa30.62■■■□□ 2.49
NKX2-1-204ENST00000522719 PICALMQ13492 652 aa30.62■■■□□ 2.49
NKX2-1-204ENST00000522719 TNFAIP1Q13829 316 aa30.62■■■□□ 2.49
NKX2-1-204ENST00000522719 VEZTQ9HBM0 779 aa30.62■■■□□ 2.49
NKX2-1-204ENST00000522719 DDX4Q9NQI0 724 aaKnown RBP30.62■■■□□ 2.49
NKX2-1-204ENST00000522719 FAM198AQ9UFP1 575 aa30.62■■■□□ 2.49
NKX2-1-204ENST00000522719 RBM8AQ9Y5S9 174 aaKnown RBP30.62■■■□□ 2.49
NKX2-1-204ENST00000522719 LAMA4Q16363 1823 aa30.62■■■□□ 2.49
NKX2-1-204ENST00000522719 FAM83AQ86UY5 434 aa30.61■■■□□ 2.49
NKX2-1-204ENST00000522719 ZC3H15Q8WU90 426 aaKnown RBP30.61■■■□□ 2.49
NKX2-1-204ENST00000522719 OSBPL5Q9H0X9 879 aaPredicted RBP30.61■■■□□ 2.49
NKX2-1-204ENST00000522719 PITPNM2Q9BZ72 1349 aa30.61■■■□□ 2.49
NKX2-1-204ENST00000522719 LAMB1P07942 1786 aa30.61■■■□□ 2.49
NKX2-1-204ENST00000522719 TNNI2P48788 182 aa30.6■■■□□ 2.49
NKX2-1-204ENST00000522719 SBK1Q52WX2 424 aa30.6■■■□□ 2.49
NKX2-1-204ENST00000522719 MCM9Q9NXL9 1143 aa30.6■■■□□ 2.49
NKX2-1-204ENST00000522719 ARPP21Q9UBL0 812 aaPredicted RBP30.6■■■□□ 2.49
NKX2-1-204ENST00000522719 COL2A1P02458 1487 aaPredicted RBP30.6■■■□□ 2.49
NKX2-1-204ENST00000522719 NECTIN1Q15223 517 aa30.59■■■□□ 2.49
NKX2-1-204ENST00000522719 APOBEC3FQ8IUX4 373 aaKnown RBP30.59■■■□□ 2.49
NKX2-1-204ENST00000522719 AMOTL1Q8IY63 956 aa30.59■■■□□ 2.49
NKX2-1-204ENST00000522719 RRAGCQ9HB90 399 aa30.59■■■□□ 2.49
NKX2-1-204ENST00000522719 TCP10L2B9ZVM9 353 aa30.58■■■□□ 2.49
NKX2-1-204ENST00000522719 MCCP23508 829 aa30.58■■■□□ 2.49
NKX2-1-204ENST00000522719 ANGEL2Q5VTE6 544 aaKnown RBP30.58■■■□□ 2.49
NKX2-1-204ENST00000522719 CTR9Q6PD62 1173 aa30.58■■■□□ 2.49
NKX2-1-204ENST00000522719 FAM151AQ8WW52 585 aa30.58■■■□□ 2.49
NKX2-1-204ENST00000522719 USP17L12C9JPN9 530 aa30.57■■■□□ 2.48
NKX2-1-204ENST00000522719 USP17L21D6R901 530 aa30.57■■■□□ 2.48
NKX2-1-204ENST00000522719 ASTN2O75129 1339 aaPredicted RBP30.57■■■□□ 2.48
NKX2-1-204ENST00000522719 IMMTQ16891 758 aaKnown RBP30.57■■■□□ 2.48
NKX2-1-204ENST00000522719 DHX36Q9H2U1 1008 aaKnown RBP30.57■■■□□ 2.48
NKX2-1-204ENST00000522719 GGA3Q9NZ52 723 aa30.57■■■□□ 2.48
NKX2-1-204ENST00000522719 PGAP2Q9UHJ9 254 aa30.57■■■□□ 2.48
NKX2-1-204ENST00000522719 HSPA4P34932 840 aa30.56■■■□□ 2.48
NKX2-1-204ENST00000522719 TCP10Q12799 353 aa30.56■■■□□ 2.48
NKX2-1-204ENST00000522719 RNF20Q5VTR2 975 aa30.56■■■□□ 2.48
NKX2-1-204ENST00000522719 CNTNAP1P78357 1384 aa30.56■■■□□ 2.48
NKX2-1-204ENST00000522719 ATRNL1Q5VV63 1379 aa30.56■■■□□ 2.48
NKX2-1-204ENST00000522719 POLR3DP05423 398 aaPredicted RBP30.56■■■□□ 2.48
NKX2-1-204ENST00000522719 DCPSQ96C86 337 aaKnown RBP30.56■■■□□ 2.48
NKX2-1-204ENST00000522719 ZNF213O14771 459 aa30.55■■■□□ 2.48
NKX2-1-204ENST00000522719 EAPPQ56P03 285 aaPredicted RBP30.55■■■□□ 2.48
NKX2-1-204ENST00000522719 TTC6Q86TZ1 520 aa30.55■■■□□ 2.48
NKX2-1-204ENST00000522719 SAP30BPQ9UHR5 308 aaKnown RBP30.55■■■□□ 2.48
NKX2-1-204ENST00000522719 C12orf60Q5U649 245 aa30.54■■■□□ 2.48
NKX2-1-204ENST00000522719 CREB3L3Q68CJ9 461 aa30.54■■■□□ 2.48
NKX2-1-204ENST00000522719 ANAPC4Q9UJX5 808 aa30.54■■■□□ 2.48
NKX2-1-204ENST00000522719 PALD1Q9ULE6 856 aa30.54■■■□□ 2.48
NKX2-1-204ENST00000522719 PPP2R3BQ9Y5P8 575 aa30.54■■■□□ 2.48
NKX2-1-204ENST00000522719 PPARAQ07869 468 aa30.53■■■□□ 2.48
NKX2-1-204ENST00000522719 ZFPM1Q8IX07 1006 aa30.53■■■□□ 2.48
NKX2-1-204ENST00000522719 ZNF526Q8TF50 670 aaPredicted RBP30.53■■■□□ 2.48
NKX2-1-204ENST00000522719 KCNB2Q92953 911 aa30.53■■■□□ 2.48
NKX2-1-204ENST00000522719 C22orf23Q9BZE7 217 aa30.53■■■□□ 2.48
NKX2-1-204ENST00000522719 NMRK2Q9NPI5 230 aa30.53■■■□□ 2.48
NKX2-1-204ENST00000522719 MINDY4BA8MYZ0 360 aa30.52■■■□□ 2.48
NKX2-1-204ENST00000522719 SLC27A2O14975 620 aa30.52■■■□□ 2.48
NKX2-1-204ENST00000522719 HLA-DOAP06340 250 aa30.52■■■□□ 2.48
NKX2-1-204ENST00000522719 CYP21A2P08686 494 aa30.52■■■□□ 2.48
NKX2-1-204ENST00000522719 RASA3Q14644 834 aa30.52■■■□□ 2.48
NKX2-1-204ENST00000522719 ZKSCAN1P17029 563 aaPredicted RBP30.51■■■□□ 2.47
NKX2-1-204ENST00000522719 ZSCAN29Q8IWY8 852 aaPredicted RBP30.51■■■□□ 2.47
NKX2-1-204ENST00000522719 DEFB129Q9H1M3 183 aa30.51■■■□□ 2.47
NKX2-1-204ENST00000522719 TAOK2Q9UL54 1235 aa30.51■■■□□ 2.47
NKX2-1-204ENST00000522719 SLC3A2P08195 630 aaKnown RBP30.5■■■□□ 2.47
NKX2-1-204ENST00000522719 TSGA10IPQ3SY00 556 aa30.5■■■□□ 2.47
NKX2-1-204ENST00000522719 PI4KBQ9UBF8 816 aa30.5■■■□□ 2.47
NKX2-1-204ENST00000522719 CYP2D7A0A087X1C5 515 aa30.49■■■□□ 2.47
NKX2-1-204ENST00000522719 DDTLA6NHG4 134 aaPredicted RBP30.49■■■□□ 2.47
NKX2-1-204ENST00000522719 RBM25P49756 843 aaKnown RBP30.49■■■□□ 2.47
NKX2-1-204ENST00000522719 HAND2P61296 217 aa30.49■■■□□ 2.47
NKX2-1-204ENST00000522719 SH3BP5LQ7L8J4 393 aa30.49■■■□□ 2.47
NKX2-1-204ENST00000522719 SULF1Q8IWU6 871 aa30.49■■■□□ 2.47
NKX2-1-204ENST00000522719 TMEM39BQ9GZU3 492 aa30.49■■■□□ 2.47
NKX2-1-204ENST00000522719 EHD4Q9H223 541 aa30.49■■■□□ 2.47
NKX2-1-204ENST00000522719 SIPA1L1O43166 1804 aa30.49■■■□□ 2.47
NKX2-1-204ENST00000522719 ROBO3Q96MS0 1386 aa30.49■■■□□ 2.47
NKX2-1-204ENST00000522719 CYP2D6P10635 497 aa30.48■■■□□ 2.47
NKX2-1-204ENST00000522719 PLCD1P51178 756 aa30.48■■■□□ 2.47
NKX2-1-204ENST00000522719 ANAPC15P60006 121 aa30.48■■■□□ 2.47
NKX2-1-204ENST00000522719 MYH8P13535 1937 aa30.48■■■□□ 2.47
NKX2-1-204ENST00000522719 LDHDQ86WU2 507 aa30.47■■■□□ 2.47
NKX2-1-204ENST00000522719 FOXP4Q8IVH2 680 aaPredicted RBP30.47■■■□□ 2.47
NKX2-1-204ENST00000522719 TBC1D32Q96NH3 1257 aa30.47■■■□□ 2.47
NKX2-1-204ENST00000522719 CSRNP1Q96S65 589 aa30.47■■■□□ 2.47
NKX2-1-204ENST00000522719 GPBP1L1Q9HC44 474 aaPredicted RBP30.47■■■□□ 2.47
NKX2-1-204ENST00000522719 CLEC11AQ9Y240 323 aa30.47■■■□□ 2.47
NKX2-1-204ENST00000522719 PCP11498 1178 aaKnown RBP30.47■■■□□ 2.47
NKX2-1-204ENST00000522719 TEPSINQ96N21 525 aa30.47■■■□□ 2.47
NKX2-1-204ENST00000522719 RNF41Q9H4P4 317 aaPredicted RBP30.47■■■□□ 2.47
NKX2-1-204ENST00000522719 SERPINB13Q9UIV8 391 aa30.47■■■□□ 2.47
NKX2-1-204ENST00000522719 CTDSPL2Q05D32 466 aa30.46■■■□□ 2.47
NKX2-1-204ENST00000522719 KRT32Q14532 448 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms